RNA–Protein interactions for RNA: ENST00000546088.5

TAF1D-222, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit D, human

TSL 3

Gene TAF1D, Length 1,728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1D-222	ENST00000546088	ATP5S	Q99766	215 aa		4.76	□□□□□ -1.65
TAF1D-222	ENST00000546088	MLST8	Q9BVC4	326 aa		4.76	□□□□□ -1.65
TAF1D-222	ENST00000546088	NPCDR1	Q9BY65	106 aa		4.76	□□□□□ -1.65
TAF1D-222	ENST00000546088	SLC39A9	Q9NUM3	307 aa		4.76	□□□□□ -1.65
TAF1D-222	ENST00000546088	FBXL17	Q9UF56	701 aa		4.76	□□□□□ -1.65
TAF1D-222	ENST00000546088	PFDN2	Q9UHV9	154 aa		4.76	□□□□□ -1.65
TAF1D-222	ENST00000546088	COL7A1	Q02388	2944 aa		4.76	□□□□□ -1.65
TAF1D-222	ENST00000546088	HELT	A6NFD8	242 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	FNDC10	F2Z333	226 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088		F6UB75	175 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	ARPC5	O15511	151 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	ZNF705D	P0CH99	300 aa	Predicted RBP	4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	ZNF705B	P0CI00	300 aa	Predicted RBP	4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	LYL1	P12980	280 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	SELENOT	P62341	195 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	OPCML	Q14982	345 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	HAGH	Q16775	308 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	ATP6V1F	Q16864	119 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	ACTL10	Q5JWF8	245 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	LCE1A	Q5T7P2	110 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	GDF5OS	Q5U4N7	250 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	C10orf113	Q5VZT2	155 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	SPATA31B1P	Q5VZV4	182 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	RNF182	Q8N6D2	247 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	HSD17B11	Q8NBQ5	300 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	SHANK2-AS3	Q9BTD1	123 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	WDR61	Q9GZS3	305 aa	Known RBP	4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	NRN1	Q9NPD7	142 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	RNF222	A6NCQ9	220 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	HMGB3	O15347	200 aa	Known RBP	4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	CFD	P00746	253 aa	Predicted RBP	4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	IFNA5	P01569	189 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	NUP62	P37198	522 aa	Predicted RBP	4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	FXYD7	P58549	80 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	ZNF709	Q8N972	641 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	OR11H4	Q8NGC9	324 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	SCGB1C1	Q8TD33	95 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	C16orf92	Q96LL3	132 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	DNAJC4	Q9NNZ3	241 aa		4.75	□□□□□ -1.65
TAF1D-222	ENST00000546088	PYY	P10082	97 aa		4.74	□□□□□ -1.65
TAF1D-222	ENST00000546088	GALR1	P47211	349 aa		4.74	□□□□□ -1.65
TAF1D-222	ENST00000546088	RPL29	P47914	159 aa	Known RBP	4.74	□□□□□ -1.65
TAF1D-222	ENST00000546088	PLP1	P60201	277 aa		4.74	□□□□□ -1.65
TAF1D-222	ENST00000546088	CD300C	Q08708	224 aa		4.74	□□□□□ -1.65
TAF1D-222	ENST00000546088	DEFB135	Q30KP9	77 aa		4.74	□□□□□ -1.65
TAF1D-222	ENST00000546088	FFAR4	Q5NUL3	377 aa		4.74	□□□□□ -1.65
TAF1D-222	ENST00000546088	FAM78B	Q5VT40	261 aa		4.74	□□□□□ -1.65
TAF1D-222	ENST00000546088		Q6ZNX1	250 aa		4.74	□□□□□ -1.65
TAF1D-222	ENST00000546088	MIR17HG	Q75NE6	70 aa		4.74	□□□□□ -1.65
TAF1D-222	ENST00000546088	STH	Q8IWL8	128 aa		4.74	□□□□□ -1.65
TAF1D-222	ENST00000546088	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.74	□□□□□ -1.65
TAF1D-222	ENST00000546088	LRRC20	Q8TCA0	184 aa		4.74	□□□□□ -1.65
TAF1D-222	ENST00000546088	SH3BGRL3	Q9H299	93 aa		4.74	□□□□□ -1.65
TAF1D-222	ENST00000546088	SEPSECS	Q9HD40	501 aa	Known RBP	4.74	□□□□□ -1.65
TAF1D-222	ENST00000546088	CLEC5A	Q9NY25	188 aa		4.74	□□□□□ -1.65
TAF1D-222	ENST00000546088	TNFSF18	Q9UNG2	199 aa		4.74	□□□□□ -1.65
TAF1D-222	ENST00000546088		H3BQ15	152 aa		4.73	□□□□□ -1.65
TAF1D-222	ENST00000546088	SLC17A3	O00476	420 aa		4.73	□□□□□ -1.65
TAF1D-222	ENST00000546088	CD5	P06127	495 aa		4.73	□□□□□ -1.65
TAF1D-222	ENST00000546088	OR10J4	P0C629	311 aa		4.73	□□□□□ -1.65
TAF1D-222	ENST00000546088	SNRPD3	P62318	126 aa	Known RBP	4.73	□□□□□ -1.65
TAF1D-222	ENST00000546088	C1orf194	Q5T5A4	169 aa		4.73	□□□□□ -1.65
TAF1D-222	ENST00000546088	RPL7L1	Q6DKI1	246 aa	Known RBP	4.73	□□□□□ -1.65
TAF1D-222	ENST00000546088	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.73	□□□□□ -1.65
TAF1D-222	ENST00000546088	OR4B1	Q8NGF8	309 aa		4.73	□□□□□ -1.65
TAF1D-222	ENST00000546088	OR1L4	Q8NGR5	311 aa		4.73	□□□□□ -1.65
TAF1D-222	ENST00000546088	BLNK	Q8WV28	456 aa		4.73	□□□□□ -1.65
TAF1D-222	ENST00000546088	RCHY1	Q96PM5	261 aa		4.73	□□□□□ -1.65
TAF1D-222	ENST00000546088	AQP10	Q96PS8	301 aa		4.73	□□□□□ -1.65
TAF1D-222	ENST00000546088	NBEAL2	Q6ZNJ1	2754 aa		4.73	□□□□□ -1.65
TAF1D-222	ENST00000546088	TRAV8-2	A0A0B4J237	113 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088		A8MZ25	164 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	C17orf112	F2Z3M2	114 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	SOCS3	O14543	225 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	MRPS12	O15235	138 aa	Known RBP	4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	MPDU1	O75352	247 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	CA1	P00915	261 aa	Predicted RBP	4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	RPL7	P18124	248 aa	Known RBP	4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	ATP6V0C	P27449	155 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	RAB2A	P61019	212 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	FAM122C	Q6P4D5	195 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	ST6GAL2	Q96JF0	529 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	PFDN5	Q99471	154 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	SLC25A2	Q9BXI2	301 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	MFF	Q9GZY8	342 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	ZMAT4	Q9H898	229 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088		U3KQK5	164 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	CXCL2	P19875	107 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	C4BPB	P20851	252 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	ID1	P41134	155 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	BPIFA4P	Q86YQ2	179 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	ZNF738	Q8NE65	137 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	TM2D3	Q9BRN9	247 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	ZNF586	Q9NXT0	402 aa		4.72	□□□□□ -1.65
TAF1D-222	ENST00000546088	TENM3	Q9P273	2699 aa		4.71	□□□□□ -1.66
TAF1D-222	ENST00000546088	IGHV3OR16-12	A0A075B7B8	117 aa		4.71	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms