RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 Q6ZNX1 250 aa12.92□□□□□ -0.34
CD9-211ENST00000546073 PSMG3Q9BT73 122 aaPredicted RBP12.92□□□□□ -0.34
CD9-211ENST00000546073 OR51M1Q9H341 326 aa12.92□□□□□ -0.34
CD9-211ENST00000546073 WFDC1Q9HC57 220 aa12.92□□□□□ -0.34
CD9-211ENST00000546073 TRAV5A0A0B4J249 113 aa12.91□□□□□ -0.34
CD9-211ENST00000546073 HMSDA8MTL9 139 aa12.91□□□□□ -0.34
CD9-211ENST00000546073 HLA-DRB4P13762 266 aa12.91□□□□□ -0.34
CD9-211ENST00000546073 C4BPBP20851 252 aa12.91□□□□□ -0.34
CD9-211ENST00000546073 TRPT1Q86TN4 253 aaKnown RBP12.91□□□□□ -0.34
CD9-211ENST00000546073 OR10G4Q8NGN3 311 aa12.91□□□□□ -0.34
CD9-211ENST00000546073 OR10G9Q8NGN4 311 aa12.91□□□□□ -0.34
CD9-211ENST00000546073 OR10G7Q8NGN6 311 aa12.91□□□□□ -0.34
CD9-211ENST00000546073 ARPC5LQ9BPX5 153 aa12.91□□□□□ -0.34
CD9-211ENST00000546073 PAXXQ9BUH6 204 aa12.91□□□□□ -0.34
CD9-211ENST00000546073 SAV1Q9H4B6 383 aaPredicted RBP12.91□□□□□ -0.34
CD9-211ENST00000546073 HLA-DRB4X5D2U9 266 aa12.91□□□□□ -0.34
CD9-211ENST00000546073 hCG_2014768A0A024R1R8 64 aa12.9□□□□□ -0.34
CD9-211ENST00000546073 SOCS3O14543 225 aa12.9□□□□□ -0.34
CD9-211ENST00000546073 PDE6HQ13956 83 aa12.9□□□□□ -0.34
CD9-211ENST00000546073 ZNF345Q14585 488 aa12.9□□□□□ -0.34
CD9-211ENST00000546073 PSG3Q16557 428 aa12.9□□□□□ -0.34
CD9-211ENST00000546073 DEFB135Q30KP9 77 aa12.9□□□□□ -0.34
CD9-211ENST00000546073 AKAP14Q86UN6 197 aa12.9□□□□□ -0.34
CD9-211ENST00000546073 OR10J6PQ8NGY7 276 aa12.9□□□□□ -0.34
CD9-211ENST00000546073 BLNKQ8WV28 456 aa12.9□□□□□ -0.34
CD9-211ENST00000546073 WWC2-AS2Q96NR7 200 aa12.9□□□□□ -0.34
CD9-211ENST00000546073 PRELID1Q9Y255 219 aa12.9□□□□□ -0.34
CD9-211ENST00000546073 RNF222A6NCQ9 220 aa12.89□□□□□ -0.35
CD9-211ENST00000546073 H3BMM0 161 aa12.89□□□□□ -0.35
CD9-211ENST00000546073 SMLR1H3BR10 107 aa12.89□□□□□ -0.35
CD9-211ENST00000546073 ZNF253O75346 499 aa12.89□□□□□ -0.35
CD9-211ENST00000546073 IGKV3-20P01619 116 aa12.89□□□□□ -0.35
CD9-211ENST00000546073 ATP6V0CP27449 155 aa12.89□□□□□ -0.35
CD9-211ENST00000546073 GCSAMLQ5JQS6 135 aa12.89□□□□□ -0.35
CD9-211ENST00000546073 FAM74A1Q5RGS3 127 aa12.89□□□□□ -0.35
CD9-211ENST00000546073 AKR1C8PQ5T2L2 129 aa12.89□□□□□ -0.35
CD9-211ENST00000546073 MIR17HGQ75NE6 70 aa12.89□□□□□ -0.35
CD9-211ENST00000546073 OR2G3Q8NGZ4 309 aa12.89□□□□□ -0.35
CD9-211ENST00000546073 IL17DQ8TAD2 202 aa12.89□□□□□ -0.35
CD9-211ENST00000546073 ZNF331Q9NQX6 463 aaPredicted RBP12.89□□□□□ -0.35
CD9-211ENST00000546073 AMBPP02760 352 aa12.88□□□□□ -0.35
CD9-211ENST00000546073 SNRPCP09234 159 aaKnown RBP12.88□□□□□ -0.35
CD9-211ENST00000546073 NBEAP1P0C6P0 100 aa12.88□□□□□ -0.35
CD9-211ENST00000546073 IGLC2P0DOY2 106 aa12.88□□□□□ -0.35
CD9-211ENST00000546073 CSN1S1P47710 185 aa12.88□□□□□ -0.35
CD9-211ENST00000546073 RPL7L1Q6DKI1 246 aaKnown RBP12.88□□□□□ -0.35
CD9-211ENST00000546073 FAM122CQ6P4D5 195 aa12.88□□□□□ -0.35
CD9-211ENST00000546073 PQLC2Q6ZP29 291 aa12.88□□□□□ -0.35
CD9-211ENST00000546073 RNF182Q8N6D2 247 aa12.88□□□□□ -0.35
CD9-211ENST00000546073 RNF141Q8WVD5 230 aa12.88□□□□□ -0.35
CD9-211ENST00000546073 RPUSD4Q96CM3 377 aaKnown RBP12.88□□□□□ -0.35
CD9-211ENST00000546073 RNF183Q96D59 192 aa12.88□□□□□ -0.35
CD9-211ENST00000546073 ACTR3CQ9C0K3 210 aaPredicted RBP12.88□□□□□ -0.35
CD9-211ENST00000546073 TRBV19A0A075B6N1 114 aa12.87□□□□□ -0.35
CD9-211ENST00000546073 A0A0J9YX75 114 aa12.87□□□□□ -0.35
CD9-211ENST00000546073 CDC34P49427 236 aaPredicted RBP12.87□□□□□ -0.35
CD9-211ENST00000546073 UBE2L3P68036 154 aaKnown RBP12.87□□□□□ -0.35
CD9-211ENST00000546073 HIST1H1AQ02539 215 aaPredicted RBP12.87□□□□□ -0.35
CD9-211ENST00000546073 MORN5Q5VZ52 161 aa12.87□□□□□ -0.35
CD9-211ENST00000546073 IGFL4Q6B9Z1 124 aa12.87□□□□□ -0.35
CD9-211ENST00000546073 KCNRGQ8N5I3 272 aa12.87□□□□□ -0.35
CD9-211ENST00000546073 CLUHP3Q96NS8 147 aa12.87□□□□□ -0.35
CD9-211ENST00000546073 RARRES2Q99969 163 aa12.87□□□□□ -0.35
CD9-211ENST00000546073 SLC25A2Q9BXI2 301 aa12.87□□□□□ -0.35
CD9-211ENST00000546073 H3BTX0 84 aa12.86□□□□□ -0.35
CD9-211ENST00000546073 MRPS12O15235 138 aaKnown RBP12.86□□□□□ -0.35
CD9-211ENST00000546073 TCTE3Q8IZS6 198 aa12.86□□□□□ -0.35
CD9-211ENST00000546073 ZNF471Q9BX82 626 aaPredicted RBP12.86□□□□□ -0.35
CD9-211ENST00000546073 RETNQ9HD89 108 aa12.86□□□□□ -0.35
CD9-211ENST00000546073 TRAV8-2A0A0B4J237 113 aa12.85□□□□□ -0.35
CD9-211ENST00000546073 H3BQ15 152 aa12.85□□□□□ -0.35
CD9-211ENST00000546073 OR10J4P0C629 311 aa12.85□□□□□ -0.35
CD9-211ENST00000546073 PYYP10082 97 aa12.85□□□□□ -0.35
CD9-211ENST00000546073 EIF5AL1Q6IS14 154 aaKnown RBP12.85□□□□□ -0.35
CD9-211ENST00000546073 OR8A1Q8NGG7 326 aa12.85□□□□□ -0.35
CD9-211ENST00000546073 C20orf173Q96LM9 149 aa12.85□□□□□ -0.35
CD9-211ENST00000546073 HYLS1Q96M11 299 aa12.85□□□□□ -0.35
CD9-211ENST00000546073 C17orf77Q96MU5 243 aa12.85□□□□□ -0.35
CD9-211ENST00000546073 OVOL2Q9BRP0 275 aa12.85□□□□□ -0.35
CD9-211ENST00000546073 ZNF586Q9NXT0 402 aa12.85□□□□□ -0.35
CD9-211ENST00000546073 F6UB75 175 aa12.84□□□□□ -0.35
CD9-211ENST00000546073 TSPOP30536 169 aa12.84□□□□□ -0.35
CD9-211ENST00000546073 RAB2AP61019 212 aa12.84□□□□□ -0.35
CD9-211ENST00000546073 LYPD1Q8N2G4 141 aa12.84□□□□□ -0.35
CD9-211ENST00000546073 OR11H2Q8NH07 326 aa12.84□□□□□ -0.35
CD9-211ENST00000546073 CMTM2Q8TAZ6 248 aa12.84□□□□□ -0.35
CD9-211ENST00000546073 MRPL53Q96EL3 112 aaKnown RBP12.84□□□□□ -0.35
CD9-211ENST00000546073 TMEM208Q9BTX3 173 aa12.84□□□□□ -0.35
CD9-211ENST00000546073 GOLT1BQ9Y3E0 138 aa12.84□□□□□ -0.35
CD9-211ENST00000546073 BCL2L11O43521 198 aa12.83□□□□□ -0.36
CD9-211ENST00000546073 CNN1P51911 297 aaKnown RBP12.83□□□□□ -0.36
CD9-211ENST00000546073 IQCF2Q8IXL9 164 aa12.83□□□□□ -0.36
CD9-211ENST00000546073 STOML3Q8TAV4 291 aa12.83□□□□□ -0.36
CD9-211ENST00000546073 SAT2Q96F10 170 aaPredicted RBP12.83□□□□□ -0.36
CD9-211ENST00000546073 XCL2Q9UBD3 114 aa12.83□□□□□ -0.36
CD9-211ENST00000546073 G3V3Q6 166 aa12.82□□□□□ -0.36
CD9-211ENST00000546073 CXorf1O96002 111 aa12.82□□□□□ -0.36
CD9-211ENST00000546073 TPT1P13693 172 aaKnown RBP12.82□□□□□ -0.36
CD9-211ENST00000546073 RANP62826 216 aaKnown RBP12.82□□□□□ -0.36
CD9-211ENST00000546073 ICAM4Q14773 271 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms