RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 DEFA6Q01524 100 aa12.11□□□□□ -0.47
LIMS2-217ENST00000545738 TMEM41BQ5BJD5 291 aa12.11□□□□□ -0.47
LIMS2-217ENST00000545738 C20orf173Q96LM9 149 aa12.11□□□□□ -0.47
LIMS2-217ENST00000545738 MRPL32Q9BYC8 188 aaKnown RBP12.11□□□□□ -0.47
LIMS2-217ENST00000545738 MAP6D1Q9H9H5 199 aa12.11□□□□□ -0.47
LIMS2-217ENST00000545738 A0A087X0K7 114 aa12.1□□□□□ -0.47
LIMS2-217ENST00000545738 DNASE2O00115 360 aaPredicted RBP12.1□□□□□ -0.47
LIMS2-217ENST00000545738 OR10J4P0C629 311 aa12.1□□□□□ -0.47
LIMS2-217ENST00000545738 SEC11BP0C7V7 166 aa12.1□□□□□ -0.47
LIMS2-217ENST00000545738 HLA-DMBP28068 263 aa12.1□□□□□ -0.47
LIMS2-217ENST00000545738 RHOBP62745 196 aa12.1□□□□□ -0.47
LIMS2-217ENST00000545738 BPIFA4PQ86YQ2 179 aa12.1□□□□□ -0.47
LIMS2-217ENST00000545738 APRG1Q8IVJ8 170 aa12.1□□□□□ -0.47
LIMS2-217ENST00000545738 DEFB125Q8N687 156 aa12.1□□□□□ -0.47
LIMS2-217ENST00000545738 RAB24Q969Q5 203 aa12.1□□□□□ -0.47
LIMS2-217ENST00000545738 FXYD5Q96DB9 178 aa12.1□□□□□ -0.47
LIMS2-217ENST00000545738 GPR82Q96P67 336 aa12.1□□□□□ -0.47
LIMS2-217ENST00000545738 TRAV2A0A0B4J234 112 aa12.09□□□□□ -0.47
LIMS2-217ENST00000545738 OR4C46A6NHA9 309 aa12.09□□□□□ -0.47
LIMS2-217ENST00000545738 CDC34P49427 236 aaPredicted RBP12.09□□□□□ -0.47
LIMS2-217ENST00000545738 LRRC20Q8TCA0 184 aa12.09□□□□□ -0.47
LIMS2-217ENST00000545738 SAT2Q96F10 170 aaPredicted RBP12.09□□□□□ -0.47
LIMS2-217ENST00000545738 TMEM14CQ9P0S9 112 aa12.09□□□□□ -0.47
LIMS2-217ENST00000545738 COL7A1Q02388 2944 aa12.09□□□□□ -0.47
LIMS2-217ENST00000545738 NDUFB4O95168 129 aa12.08□□□□□ -0.47
LIMS2-217ENST00000545738 RNF182Q8N6D2 247 aa12.08□□□□□ -0.47
LIMS2-217ENST00000545738 HRH4Q9H3N8 390 aa12.08□□□□□ -0.47
LIMS2-217ENST00000545738 HUWE1Q7Z6Z7 4374 aaKnown RBP12.08□□□□□ -0.48
LIMS2-217ENST00000545738 STAG3L2P0CL84 134 aa12.08□□□□□ -0.48
LIMS2-217ENST00000545738 STAG3L3P0CL85 134 aa12.08□□□□□ -0.48
LIMS2-217ENST00000545738 ATF4P18848 351 aaPredicted RBP12.08□□□□□ -0.48
LIMS2-217ENST00000545738 DEFB131AP59861 70 aa12.08□□□□□ -0.48
LIMS2-217ENST00000545738 PAFAH1B2P68402 229 aa12.08□□□□□ -0.48
LIMS2-217ENST00000545738 FAM74A1Q5RGS3 127 aa12.08□□□□□ -0.48
LIMS2-217ENST00000545738 GTSCR1Q86UQ5 136 aa12.08□□□□□ -0.48
LIMS2-217ENST00000545738 OR51M1Q9H341 326 aa12.08□□□□□ -0.48
LIMS2-217ENST00000545738 A0A1W2PPV4 95 aa12.07□□□□□ -0.48
LIMS2-217ENST00000545738 OR11H12B2RN74 326 aa12.07□□□□□ -0.48
LIMS2-217ENST00000545738 OR7C2O60412 319 aa12.07□□□□□ -0.48
LIMS2-217ENST00000545738 MBP02144 154 aa12.07□□□□□ -0.48
LIMS2-217ENST00000545738 ARL14EPLP0DKL9 152 aa12.07□□□□□ -0.48
LIMS2-217ENST00000545738 S100A7P31151 101 aa12.07□□□□□ -0.48
LIMS2-217ENST00000545738 PSMG4Q5JS54 123 aa12.07□□□□□ -0.48
LIMS2-217ENST00000545738 AKR1C8PQ5T2L2 129 aa12.07□□□□□ -0.48
LIMS2-217ENST00000545738 S100A7AQ86SG5 101 aa12.07□□□□□ -0.48
LIMS2-217ENST00000545738 PAXXQ9BUH6 204 aa12.07□□□□□ -0.48
LIMS2-217ENST00000545738 NBEAL2Q6ZNJ1 2754 aa12.07□□□□□ -0.48
LIMS2-217ENST00000545738 TRBV19A0A075B6N1 114 aa12.06□□□□□ -0.48
LIMS2-217ENST00000545738 IGHV4-30-4P0DP06 118 aa12.06□□□□□ -0.48
LIMS2-217ENST00000545738 GDF5OSQ5U4N7 250 aa12.06□□□□□ -0.48
LIMS2-217ENST00000545738 BLNKQ8WV28 456 aa12.06□□□□□ -0.48
LIMS2-217ENST00000545738 PHYHIPLQ96FC7 376 aa12.06□□□□□ -0.48
LIMS2-217ENST00000545738 ZNF331Q9NQX6 463 aaPredicted RBP12.06□□□□□ -0.48
LIMS2-217ENST00000545738 HIST1H1EP10412 219 aaKnown RBP12.06□□□□□ -0.48
LIMS2-217ENST00000545738 FGF8P55075 233 aaPredicted RBP12.06□□□□□ -0.48
LIMS2-217ENST00000545738 KHDC3LQ587J8 217 aa12.06□□□□□ -0.48
LIMS2-217ENST00000545738 RNF141Q8WVD5 230 aa12.06□□□□□ -0.48
LIMS2-217ENST00000545738 C16orf92Q96LL3 132 aa12.06□□□□□ -0.48
LIMS2-217ENST00000545738 F6UB75 175 aa12.05□□□□□ -0.48
LIMS2-217ENST00000545738 ISLRO14498 428 aa12.05□□□□□ -0.48
LIMS2-217ENST00000545738 EIF5AP63241 154 aaKnown RBP12.05□□□□□ -0.48
LIMS2-217ENST00000545738 UBE2L3P68036 154 aaKnown RBP12.05□□□□□ -0.48
LIMS2-217ENST00000545738 ALKAL2Q6UX46 152 aa12.05□□□□□ -0.48
LIMS2-217ENST00000545738 LINC00518Q8N0U6 118 aa12.05□□□□□ -0.48
LIMS2-217ENST00000545738 LINC00052Q96N35 136 aa12.05□□□□□ -0.48
LIMS2-217ENST00000545738 FAM110AQ9BQ89 295 aa12.05□□□□□ -0.48
LIMS2-217ENST00000545738 ACTR3CQ9C0K3 210 aaPredicted RBP12.05□□□□□ -0.48
LIMS2-217ENST00000545738 TMPRSS5Q9H3S3 457 aa12.05□□□□□ -0.48
LIMS2-217ENST00000545738 CTXND1A0A1B0GTU2 59 aa12.04□□□□□ -0.48
LIMS2-217ENST00000545738 KNCNA6PVL3 124 aa12.04□□□□□ -0.48
LIMS2-217ENST00000545738 NBEAP1P0C6P0 100 aa12.04□□□□□ -0.48
LIMS2-217ENST00000545738 PSMB3P49720 205 aa12.04□□□□□ -0.48
LIMS2-217ENST00000545738 LCN15Q6UWW0 184 aa12.04□□□□□ -0.48
LIMS2-217ENST00000545738 RNF24Q9Y225 148 aa12.04□□□□□ -0.48
LIMS2-217ENST00000545738 RBMY1BA6NDE4 496 aaKnown RBP12.03□□□□□ -0.48
LIMS2-217ENST00000545738 RBMY1EA6NEQ0 496 aaKnown RBP12.03□□□□□ -0.48
LIMS2-217ENST00000545738 ZNF705FA8MVS1 300 aaPredicted RBP12.03□□□□□ -0.48
LIMS2-217ENST00000545738 RBMY1DP0C7P1 496 aaKnown RBP12.03□□□□□ -0.48
LIMS2-217ENST00000545738 MEOX2P50222 304 aa12.03□□□□□ -0.48
LIMS2-217ENST00000545738 TAS2R45P59539 299 aa12.03□□□□□ -0.48
LIMS2-217ENST00000545738 EXOC3-AS1Q8N2X6 119 aa12.03□□□□□ -0.48
LIMS2-217ENST00000545738 FAM213BQ8TBF2 198 aa12.03□□□□□ -0.48
LIMS2-217ENST00000545738 SRD5A3Q9H8P0 318 aa12.03□□□□□ -0.48
LIMS2-217ENST00000545738 TENM3Q9P273 2699 aa12.03□□□□□ -0.48
LIMS2-217ENST00000545738 UMAD1C9J7I0 102 aa12.03□□□□□ -0.48
LIMS2-217ENST00000545738 M0R3E3 92 aa12.03□□□□□ -0.48
LIMS2-217ENST00000545738 GCHFRP30047 84 aa12.03□□□□□ -0.48
LIMS2-217ENST00000545738 SULT1A2P50226 295 aa12.03□□□□□ -0.48
LIMS2-217ENST00000545738 PQLC2Q6ZP29 291 aa12.03□□□□□ -0.48
LIMS2-217ENST00000545738 MAP1LC3B2A6NCE7 125 aa12.02□□□□□ -0.49
LIMS2-217ENST00000545738 LINC00862A6NCI5 91 aa12.02□□□□□ -0.49
LIMS2-217ENST00000545738 PRAC2D3DTV9 90 aa12.02□□□□□ -0.49
LIMS2-217ENST00000545738 ZNF705DP0CH99 300 aaPredicted RBP12.02□□□□□ -0.49
LIMS2-217ENST00000545738 ZNF705BP0CI00 300 aaPredicted RBP12.02□□□□□ -0.49
LIMS2-217ENST00000545738 SNRPD3P62318 126 aaKnown RBP12.02□□□□□ -0.49
LIMS2-217ENST00000545738 LINC00322Q6ZN03 302 aaPredicted RBP12.02□□□□□ -0.49
LIMS2-217ENST00000545738 MRAPQ8TCY5 172 aa12.02□□□□□ -0.49
LIMS2-217ENST00000545738 MAP1LC3BQ9GZQ8 125 aa12.02□□□□□ -0.49
LIMS2-217ENST00000545738 A0A1B0GV50 99 aa12.01□□□□□ -0.49
LIMS2-217ENST00000545738 FRMD6-AS1P0C7T7 363 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms