RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 STX12Q86Y82 276 aa10.59□□□□□ -0.71
CLSTN3-216ENST00000545663 OR10P1Q8NGE3 313 aa10.59□□□□□ -0.71
CLSTN3-216ENST00000545663 OR4X1Q8NH49 305 aa10.59□□□□□ -0.71
CLSTN3-216ENST00000545663 SLC35E1Q96K37 410 aa10.59□□□□□ -0.71
CLSTN3-216ENST00000545663 GGACTQ9BVM4 153 aa10.59□□□□□ -0.71
CLSTN3-216ENST00000545663 SLC25A31Q9H0C2 315 aa10.59□□□□□ -0.71
CLSTN3-216ENST00000545663 PAIP2BQ9ULR5 123 aaKnown RBP10.59□□□□□ -0.71
CLSTN3-216ENST00000545663 DNAH8Q96JB1 4490 aa10.59□□□□□ -0.71
CLSTN3-216ENST00000545663 FNDC10F2Z333 226 aa10.58□□□□□ -0.72
CLSTN3-216ENST00000545663 HBE1P02100 147 aa10.58□□□□□ -0.72
CLSTN3-216ENST00000545663 FABP1P07148 127 aa10.58□□□□□ -0.72
CLSTN3-216ENST00000545663 BCAP31P51572 246 aa10.58□□□□□ -0.72
CLSTN3-216ENST00000545663 CAV2P51636 162 aa10.58□□□□□ -0.72
CLSTN3-216ENST00000545663 HBG1P69891 147 aa10.58□□□□□ -0.72
CLSTN3-216ENST00000545663 HBG2P69892 147 aa10.58□□□□□ -0.72
CLSTN3-216ENST00000545663 TMEM14EPQ6UXP3 125 aa10.58□□□□□ -0.72
CLSTN3-216ENST00000545663 Q6ZNX1 250 aa10.58□□□□□ -0.72
CLSTN3-216ENST00000545663 THAP6Q8TBB0 222 aa10.58□□□□□ -0.72
CLSTN3-216ENST00000545663 LYRM2Q9NU23 88 aaPredicted RBP10.58□□□□□ -0.72
CLSTN3-216ENST00000545663 MPC2O95563 127 aa10.57□□□□□ -0.72
CLSTN3-216ENST00000545663 HLA-DRB4P13762 266 aa10.57□□□□□ -0.72
CLSTN3-216ENST00000545663 CXCL3P19876 107 aa10.57□□□□□ -0.72
CLSTN3-216ENST00000545663 BAXQ07812 192 aa10.57□□□□□ -0.72
CLSTN3-216ENST00000545663 ESRGQ1W209 222 aa10.57□□□□□ -0.72
CLSTN3-216ENST00000545663 PRSS54Q6PEW0 395 aa10.57□□□□□ -0.72
CLSTN3-216ENST00000545663 ZNF709Q8N972 641 aa10.57□□□□□ -0.72
CLSTN3-216ENST00000545663 OR11H7Q8NGC8 314 aa10.57□□□□□ -0.72
CLSTN3-216ENST00000545663 HLA-DRB4X5D2U9 266 aa10.57□□□□□ -0.72
CLSTN3-216ENST00000545663 A0A087WTM6 91 aa10.56□□□□□ -0.72
CLSTN3-216ENST00000545663 A0A1W2PS18 150 aa10.56□□□□□ -0.72
CLSTN3-216ENST00000545663 CLN5O75503 358 aa10.56□□□□□ -0.72
CLSTN3-216ENST00000545663 CRYBB3P26998 211 aa10.56□□□□□ -0.72
CLSTN3-216ENST00000545663 NUP62P37198 522 aaPredicted RBP10.56□□□□□ -0.72
CLSTN3-216ENST00000545663 PAX9P55771 341 aa10.56□□□□□ -0.72
CLSTN3-216ENST00000545663 RRN3P1Q2M238 152 aa10.56□□□□□ -0.72
CLSTN3-216ENST00000545663 LRRC37A5PQ49AS3 106 aa10.56□□□□□ -0.72
CLSTN3-216ENST00000545663 ZNF600Q6ZNG1 722 aa10.56□□□□□ -0.72
CLSTN3-216ENST00000545663 TMEM170AQ8WVE7 144 aa10.56□□□□□ -0.72
CLSTN3-216ENST00000545663 SLC35B3Q9H1N7 401 aa10.56□□□□□ -0.72
CLSTN3-216ENST00000545663 H3BP45 60 aa10.55□□□□□ -0.72
CLSTN3-216ENST00000545663 TMEM50AO95807 157 aa10.55□□□□□ -0.72
CLSTN3-216ENST00000545663 PLA2G1BP04054 148 aaKnown RBP10.55□□□□□ -0.72
CLSTN3-216ENST00000545663 S100A11P31949 105 aa10.55□□□□□ -0.72
CLSTN3-216ENST00000545663 SULT1A1P50225 295 aa10.55□□□□□ -0.72
CLSTN3-216ENST00000545663 ATP6V1FQ16864 119 aa10.55□□□□□ -0.72
CLSTN3-216ENST00000545663 OR1S2Q8NGQ3 325 aa10.55□□□□□ -0.72
CLSTN3-216ENST00000545663 C11orf1Q9H5F2 150 aa10.55□□□□□ -0.72
CLSTN3-216ENST00000545663 FNDC4Q9H6D8 234 aaPredicted RBP10.55□□□□□ -0.72
CLSTN3-216ENST00000545663 FAM30AQ9NZY2 134 aa10.55□□□□□ -0.72
CLSTN3-216ENST00000545663 GOLT1BQ9Y3E0 138 aa10.55□□□□□ -0.72
CLSTN3-216ENST00000545663 PKHD1L1Q86WI1 4243 aa10.55□□□□□ -0.72
CLSTN3-216ENST00000545663 CFDP00746 253 aaPredicted RBP10.54□□□□□ -0.72
CLSTN3-216ENST00000545663 METTL15P1P0C7V9 234 aa10.54□□□□□ -0.72
CLSTN3-216ENST00000545663 RND2P52198 227 aa10.54□□□□□ -0.72
CLSTN3-216ENST00000545663 OR8G2PQ6IF36 304 aa10.54□□□□□ -0.72
CLSTN3-216ENST00000545663 TMEM252Q8N6L7 170 aa10.54□□□□□ -0.72
CLSTN3-216ENST00000545663 METTL26Q96S19 204 aa10.54□□□□□ -0.72
CLSTN3-216ENST00000545663 UPK3BQ9BT76 320 aa10.54□□□□□ -0.72
CLSTN3-216ENST00000545663 OR10J1P30954 320 aa10.53□□□□□ -0.72
CLSTN3-216ENST00000545663 S100A7P31151 101 aa10.53□□□□□ -0.72
CLSTN3-216ENST00000545663 YPEL3P61236 119 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-216ENST00000545663 SNRPD3P62318 126 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-216ENST00000545663 RAB31Q13636 194 aa10.53□□□□□ -0.72
CLSTN3-216ENST00000545663 TMEM144Q7Z5S9 345 aa10.53□□□□□ -0.72
CLSTN3-216ENST00000545663 OR2T35Q8NGX2 323 aa10.53□□□□□ -0.72
CLSTN3-216ENST00000545663 CHAC2Q8WUX2 184 aa10.53□□□□□ -0.72
CLSTN3-216ENST00000545663 ACY3Q96HD9 319 aa10.53□□□□□ -0.72
CLSTN3-216ENST00000545663 NPVFQ9HCQ7 196 aa10.53□□□□□ -0.72
CLSTN3-216ENST00000545663 ZFP92A6NM28 416 aa10.52□□□□□ -0.73
CLSTN3-216ENST00000545663 ZNF705GA8MUZ8 300 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-216ENST00000545663 PRSS46E5RG02 174 aa10.52□□□□□ -0.73
CLSTN3-216ENST00000545663 AKR1C1Q04828 323 aa10.52□□□□□ -0.73
CLSTN3-216ENST00000545663 GAMTQ14353 236 aa10.52□□□□□ -0.73
CLSTN3-216ENST00000545663 ACOT7LQ6ZUV0 252 aa10.52□□□□□ -0.73
CLSTN3-216ENST00000545663 INO80EQ8NBZ0 244 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-216ENST00000545663 Q8WTZ3 238 aa10.52□□□□□ -0.73
CLSTN3-216ENST00000545663 NPIPB3Q92617 1050 aa10.52□□□□□ -0.73
CLSTN3-216ENST00000545663 TMEM70Q9BUB7 260 aa10.52□□□□□ -0.73
CLSTN3-216ENST00000545663 MBD2Q9UBB5 411 aa10.52□□□□□ -0.73
CLSTN3-216ENST00000545663 PFDN2Q9UHV9 154 aa10.52□□□□□ -0.73
CLSTN3-216ENST00000545663 FAM24AA6NFZ4 105 aa10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 PMS2P5A8MQ11 134 aa10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 H0YIZ8 118 aa10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 MPDU1O75352 247 aa10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 OXTP01178 125 aa10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 ATP5G1P05496 136 aa10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 IGLC1P0CG04 106 aa10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 RPL12P30050 165 aaKnown RBP10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 ATP5G3P48201 142 aa10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 SELENOTP62341 195 aa10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 SLC38A11Q08AI6 406 aa10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 S100A7AQ86SG5 101 aa10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 LINC00528Q8N1L1 170 aa10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 THAP8Q8NA92 274 aa10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 OR4B1Q8NGF8 309 aa10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 GLMPQ8WWB7 406 aa10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 TRGV9Q99603 122 aa10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 TMEM147Q9BVK8 224 aa10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 UQCC1Q9NVA1 299 aa10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 OR5AC2Q9NZP5 309 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms