RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 WT1-ASQ06250 92 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 TMEM75Q8N9X5 138 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 TPSG1Q9NRR2 321 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 PI4KAP42356 2102 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 EML6Q6ZMW3 1958 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 A0A1B0GUS0 222 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 OOSP1A8MZH6 123 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 SHISA9B4DS77 424 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 CD300EQ496F6 205 aaPredicted RBP4.65□□□□□ -1.67
VPS50-220ENST00000544910 KAAG1Q9UBP8 84 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 CHTOPQ9Y3Y2 248 aaKnown RBP4.65□□□□□ -1.67
VPS50-220ENST00000544910 MED12Q93074 2177 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 F2Z2F3 143 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 K7EM74 188 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 K7EP34 96 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 SMAD7O15105 426 aaKnown RBP4.65□□□□□ -1.67
VPS50-220ENST00000544910 PLNP26678 52 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 ASIPP42127 132 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 LY6EQ16553 131 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 FAM231DQ6ZW35 169 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 LYPD1Q8N2G4 141 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 LINC00479Q96M42 142 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 SLC50A1Q9BRV3 221 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 SHANK2-AS3Q9BTD1 123 aa4.65□□□□□ -1.67
VPS50-220ENST00000544910 ZNF815PA8K554 130 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 TRGV3P03979 118 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 C5orf64Q2M2E5 130 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 PRSS33Q8NF86 280 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 FXYD5Q96DB9 178 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 YPEL4Q96NS1 127 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 ASCL2Q99929 193 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 IGHV3-35A0A0C4DH35 117 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 hDV102S1A0JD36 115 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 RBMY1BA6NDE4 496 aaKnown RBP4.64□□□□□ -1.67
VPS50-220ENST00000544910 RBMY1EA6NEQ0 496 aaKnown RBP4.64□□□□□ -1.67
VPS50-220ENST00000544910 IGHV4-39P01824 125 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 RBMY1DP0C7P1 496 aaKnown RBP4.64□□□□□ -1.67
VPS50-220ENST00000544910 RBMY1A1P0DJD3 496 aaKnown RBP4.64□□□□□ -1.67
VPS50-220ENST00000544910 RBMY1CP0DJD4 496 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 SPAG8Q99932 426 aaPredicted RBP4.64□□□□□ -1.67
VPS50-220ENST00000544910 IGKV3-7A0A075B6H7 116 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 FAM231BA6NCW3 169 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 WISP2O76076 250 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 PF4V1P10720 104 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 BRWD1-AS2P59051 145 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 TEX43Q6ZNM6 134 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 KLF12Q9Y4X4 402 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 EML5Q05BV3 1969 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 SDK2Q58EX2 2172 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 IGKV2-40A0A087WW87 121 aaPredicted RBP4.64□□□□□ -1.67
VPS50-220ENST00000544910 FABP5P3A8MUU1 101 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 IGKV2D-40P01614 121 aaPredicted RBP4.64□□□□□ -1.67
VPS50-220ENST00000544910 MSMPQ1L6U9 139 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 S100A7L2Q5SY68 101 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 CDPF1Q6NVV7 123 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 WFDC3Q8IUB2 231 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 TMEM14CQ9P0S9 112 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 CTSZQ9UBR2 303 aa4.64□□□□□ -1.67
VPS50-220ENST00000544910 TMEM238C9JI98 176 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 CT83Q5H943 113 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 KIAA1549Q9HCM3 1950 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 TRBV20-1A0A075B6N2 111 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 PSMB11A5LHX3 300 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 SH2D1AO60880 128 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 TGFAP01135 160 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 PAX1P15863 534 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 LCN12Q6JVE5 192 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 Q6ZWC4 215 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 H3BRN7 92 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 PRR31Q5SQ13 230 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 FAM159AQ6UWV7 190 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 RNF182Q8N6D2 247 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 IGF2BP2-AS1Q96M15 143 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 IGHV3OR16-8A0A075B7F1 116 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 TRAV8-1A0A0A6YYK1 113 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 TRAV2A0A0B4J234 112 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 GAGE12HA6NDE8 117 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 IGLV2-23P01705 113 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 NBL1P41271 181 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 ZNF56Q15929 161 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 PPDPFLQ8WWR9 84 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 TMEM101Q96IK0 257 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 TSSC4Q9Y5U2 329 aaPredicted RBP4.63□□□□□ -1.67
VPS50-220ENST00000544910 TMEM8BA6NDV4 472 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 TNFRSF6BO95407 300 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 PRTN3P24158 256 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 EFNA4P52798 201 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 LAGE3Q14657 143 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 FAM168AQ92567 244 aa4.63□□□□□ -1.67
VPS50-220ENST00000544910 IGHV3OR16-13A0A075B7E8 117 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 IGHV3-74A0A0B4J1X5 117 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 KIR2DL5BA0A0G2JN68 375 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 KIR2DL5BA0A0G2JPC4 375 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 NPFFO15130 113 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 ATP5J2P56134 94 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 SUMO2P61956 95 aaKnown RBP4.62□□□□□ -1.67
VPS50-220ENST00000544910 COA6Q5JTJ3 125 aaKnown RBP4.62□□□□□ -1.67
VPS50-220ENST00000544910 KIR2DL5AQ8N109 375 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 CHAC1Q9BUX1 264 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 NPIPB5A8MRT5 1133 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms