RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 DYNLT3P51808 116 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 RAB4BP61018 213 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 YPEL3P61236 119 aaPredicted RBP0.69□□□□□ -2.3
CCDC170-203ENST00000544131 UBE2BP63146 152 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 SURF2Q15527 256 aaPredicted RBP0.69□□□□□ -2.3
CCDC170-203ENST00000544131 TSNQ15631 228 aaKnown RBP0.69□□□□□ -2.3
CCDC170-203ENST00000544131 NDUFA5Q16718 116 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 Q1T7F1 81 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 BCL2L15Q5TBC7 163 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 FP248Q71RG6 208 aaPredicted RBP0.69□□□□□ -2.3
CCDC170-203ENST00000544131 RPS19BP1Q86WX3 136 aaKnown RBP0.69□□□□□ -2.3
CCDC170-203ENST00000544131 CLECL1Q8IZS7 167 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 LINC00471Q8N535 108 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.69□□□□□ -2.3
CCDC170-203ENST00000544131 OR4K15Q8NH41 348 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 PPTC7Q8NI37 304 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 MBD3L1Q8WWY6 194 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 BORCS8Q96FH0 119 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 RETNLBQ9BQ08 111 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 REG4Q9BYZ8 158 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 OR2J1Q9GZK6 312 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 IMUPQ9GZP8 106 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 C6orf62Q9GZU0 229 aaPredicted RBP0.69□□□□□ -2.3
CCDC170-203ENST00000544131 TMEM126AQ9H061 195 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 SH3BGRL3Q9H299 93 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 ASB4Q9Y574 426 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 TEP1Q99973 2627 aaKnown RBP0.69□□□□□ -2.3
CCDC170-203ENST00000544131 USP24Q9UPU5 2620 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 TECPR2O15040 1411 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 FMN1Q68DA7 1419 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 ADGRB2O60241 1585 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 FRMPD1Q5SYB0 1578 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 ANKRD30AQ9BXX3 1397 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 TULP4Q9NRJ4 1543 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 ZNF469Q96JG9 3925 aaPredicted RBP0.69□□□□□ -2.3
CCDC170-203ENST00000544131 KDM5AP29375 1690 aaKnown RBP0.69□□□□□ -2.3
CCDC170-203ENST00000544131 PPRC1Q5VV67 1664 aaKnown RBP0.69□□□□□ -2.3
CCDC170-203ENST00000544131 ADGBQ8N7X0 1667 aa0.69□□□□□ -2.3
CCDC170-203ENST00000544131 EPG5Q9HCE0 2579 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 LRP6O75581 1613 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 C2orf70A6NJV1 201 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 GABARAPH6UMI1 98 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 CITO14578 2027 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 TECTAO75443 2155 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 TCL1BO95988 128 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 APOA2P02652 100 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 METTL15P1P0C7V9 234 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 RGPD1P0DJD0 1748 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 GLI2P10070 1586 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 IL9P15248 144 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 S100GP29377 79 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 S100A11P31949 105 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 CDK5R1Q15078 307 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 ESRGQ1W209 222 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 DEFB115Q30KQ5 88 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 TMEM78Q5T7P6 136 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 EIF5AL1Q6IS14 154 aaKnown RBP0.68□□□□□ -2.3
CCDC170-203ENST00000544131 TTC37Q6PGP7 1564 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 ZNF826PQ6ZT77 177 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 SUPT6HQ7KZ85 1726 aaKnown RBP0.68□□□□□ -2.3
CCDC170-203ENST00000544131 TAC4Q86UU9 113 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 IFT20Q8IY31 132 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 LINC00311Q8N616 119 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 TEX29Q8N6K0 151 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 LINC00301Q8NCQ3 95 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 OR2T35Q8NGX2 323 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 OR2T10Q8NGZ9 312 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 ZNF714Q96N38 554 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 PCNX1Q96RV3 2341 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 SLC25A21Q9BQT8 299 aaPredicted RBP0.68□□□□□ -2.3
CCDC170-203ENST00000544131 ADAT1Q9BUB4 502 aaKnown RBP0.68□□□□□ -2.3
CCDC170-203ENST00000544131 EFCAB11Q9BUY7 163 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 GGACTQ9BVM4 153 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 YIPF3Q9GZM5 350 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 BOLA2Q9H3K6 86 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 TAF9BQ9HBM6 251 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 NIT2Q9NQR4 276 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 OTORQ9NRC9 128 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 SMPXQ9UHP9 88 aa0.68□□□□□ -2.3
CCDC170-203ENST00000544131 CNOT1A5YKK6 2376 aaKnown RBP0.68□□□□□ -2.3
CCDC170-203ENST00000544131 ZCCHC11Q5TAX3 1644 aaKnown RBP0.67□□□□□ -2.3
CCDC170-203ENST00000544131 CREBBPQ92793 2442 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 COL24A1Q17RW2 1714 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.67□□□□□ -2.3
CCDC170-203ENST00000544131 KIAA1109Q2LD37 5005 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 EIF4G3O43432 1585 aaKnown RBP0.67□□□□□ -2.3
CCDC170-203ENST00000544131 DIP2AQ14689 1571 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 RIC1Q4ADV7 1423 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 CD109Q6YHK3 1445 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 NAV3Q8IVL0 2385 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 TRAPPC8Q9Y2L5 1435 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 IGKV3-7A0A075B6H7 116 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 IGKV2D-26A0A0A0MRZ7 120 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 LOC105371267A0A1B0GV96 52 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 AIPO00170 330 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 LYZL6O75951 148 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 FABP2P12104 132 aa0.67□□□□□ -2.3
CCDC170-203ENST00000544131 ZNF93P35789 620 aaPredicted RBP0.67□□□□□ -2.3
CCDC170-203ENST00000544131 EIF3IQ13347 325 aaKnown RBP0.67□□□□□ -2.3
CCDC170-203ENST00000544131 ELOBQ15370 118 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms