RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 NAP1L6A6NFF2 107 aa13.79□□□□□ -0.2
CACNA1C-230ENST00000543114 K7EPK0 472 aa13.79□□□□□ -0.2
CACNA1C-230ENST00000543114 SCGB1D2O95969 90 aa13.79□□□□□ -0.2
CACNA1C-230ENST00000543114 ANXA7P20073 488 aaKnown RBP13.79□□□□□ -0.2
CACNA1C-230ENST00000543114 BTCP35070 178 aa13.79□□□□□ -0.2
CACNA1C-230ENST00000543114 INPP1P49441 399 aa13.79□□□□□ -0.2
CACNA1C-230ENST00000543114 PSG3Q16557 428 aa13.79□□□□□ -0.2
CACNA1C-230ENST00000543114 C1orf134Q5TEV5 83 aa13.79□□□□□ -0.2
CACNA1C-230ENST00000543114 TRIQKQ629K1 86 aa13.79□□□□□ -0.2
CACNA1C-230ENST00000543114 ARV1Q9H2C2 271 aa13.79□□□□□ -0.2
CACNA1C-230ENST00000543114 RCL1Q9Y2P8 373 aaKnown RBP13.79□□□□□ -0.2
CACNA1C-230ENST00000543114 LRP1BQ9NZR2 4599 aa13.79□□□□□ -0.2
CACNA1C-230ENST00000543114 FNDC10F2Z333 226 aa13.78□□□□□ -0.2
CACNA1C-230ENST00000543114 F5H768 121 aa13.78□□□□□ -0.2
CACNA1C-230ENST00000543114 IAH1Q2TAA2 248 aaPredicted RBP13.78□□□□□ -0.2
CACNA1C-230ENST00000543114 NPVFQ9HCQ7 196 aa13.78□□□□□ -0.2
CACNA1C-230ENST00000543114 LINC00854A0A1B0GVQ3 168 aa13.77□□□□□ -0.21
CACNA1C-230ENST00000543114 FAM3BP58499 235 aaPredicted RBP13.77□□□□□ -0.21
CACNA1C-230ENST00000543114 TAS2R60P59551 318 aa13.77□□□□□ -0.21
CACNA1C-230ENST00000543114 ARL16Q0P5N6 197 aa13.77□□□□□ -0.21
CACNA1C-230ENST00000543114 C4orf46Q504U0 113 aa13.77□□□□□ -0.21
CACNA1C-230ENST00000543114 TEPPQ6URK8 271 aa13.77□□□□□ -0.21
CACNA1C-230ENST00000543114 TMEM256Q8N2U0 113 aa13.77□□□□□ -0.21
CACNA1C-230ENST00000543114 OR10P1Q8NGE3 313 aa13.77□□□□□ -0.21
CACNA1C-230ENST00000543114 LRRC20Q8TCA0 184 aa13.77□□□□□ -0.21
CACNA1C-230ENST00000543114 RPUSD4Q96CM3 377 aaKnown RBP13.77□□□□□ -0.21
CACNA1C-230ENST00000543114 LINC01587Q99440 93 aa13.77□□□□□ -0.21
CACNA1C-230ENST00000543114 SDHCQ99643 169 aaPredicted RBP13.77□□□□□ -0.21
CACNA1C-230ENST00000543114 ATG101Q9BSB4 218 aa13.77□□□□□ -0.21
CACNA1C-230ENST00000543114 MGAT4CQ9UBM8 478 aa13.77□□□□□ -0.21
CACNA1C-230ENST00000543114 TSC22D2O75157 780 aa13.76□□□□□ -0.21
CACNA1C-230ENST00000543114 ATP5G1P05496 136 aa13.76□□□□□ -0.21
CACNA1C-230ENST00000543114 SNRPCP09234 159 aaKnown RBP13.76□□□□□ -0.21
CACNA1C-230ENST00000543114 HTN1P15515 57 aa13.76□□□□□ -0.21
CACNA1C-230ENST00000543114 ATP5G3P48201 142 aa13.76□□□□□ -0.21
CACNA1C-230ENST00000543114 ZNF546Q86UE3 836 aa13.76□□□□□ -0.21
CACNA1C-230ENST00000543114 ZBTB8BQ8NAP8 495 aaPredicted RBP13.76□□□□□ -0.21
CACNA1C-230ENST00000543114 C16orf74Q96GX8 76 aa13.76□□□□□ -0.21
CACNA1C-230ENST00000543114 PPP1R14DQ9NXH3 145 aa13.76□□□□□ -0.21
CACNA1C-230ENST00000543114 NUDT3O95989 172 aa13.75□□□□□ -0.21
CACNA1C-230ENST00000543114 CXCL2P19875 107 aa13.75□□□□□ -0.21
CACNA1C-230ENST00000543114 CDKN1BP46527 198 aa13.75□□□□□ -0.21
CACNA1C-230ENST00000543114 LCN15Q6UWW0 184 aa13.75□□□□□ -0.21
CACNA1C-230ENST00000543114 LINC00305Q7Z4B0 112 aa13.75□□□□□ -0.21
CACNA1C-230ENST00000543114 S100A7AQ86SG5 101 aa13.75□□□□□ -0.21
CACNA1C-230ENST00000543114 ZNRF2Q8NHG8 242 aa13.75□□□□□ -0.21
CACNA1C-230ENST00000543114 RNASE8Q8TDE3 154 aaKnown RBP13.75□□□□□ -0.21
CACNA1C-230ENST00000543114 ZNF331Q9NQX6 463 aaPredicted RBP13.75□□□□□ -0.21
CACNA1C-230ENST00000543114 AGPAT2O15120 278 aa13.74□□□□□ -0.21
CACNA1C-230ENST00000543114 TAS2R30P59541 319 aa13.74□□□□□ -0.21
CACNA1C-230ENST00000543114 KIR3DS1Q14943 382 aa13.74□□□□□ -0.21
CACNA1C-230ENST00000543114 MORN5Q5VZ52 161 aa13.74□□□□□ -0.21
CACNA1C-230ENST00000543114 PARD6GQ9BYG4 376 aaPredicted RBP13.74□□□□□ -0.21
CACNA1C-230ENST00000543114 GSKIPQ9P0R6 139 aa13.74□□□□□ -0.21
CACNA1C-230ENST00000543114 NBDYA0A0U1RRE5 68 aa13.73□□□□□ -0.21
CACNA1C-230ENST00000543114 C7orf66A4D0T2 115 aa13.73□□□□□ -0.21
CACNA1C-230ENST00000543114 CBY3A6NI87 242 aa13.73□□□□□ -0.21
CACNA1C-230ENST00000543114 H3BTX0 84 aa13.73□□□□□ -0.21
CACNA1C-230ENST00000543114 SLC17A3O00476 420 aa13.73□□□□□ -0.21
CACNA1C-230ENST00000543114 GOSR2O14653 212 aa13.73□□□□□ -0.21
CACNA1C-230ENST00000543114 MBPP02686 304 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-230ENST00000543114 TNP2Q05952 138 aa13.73□□□□□ -0.21
CACNA1C-230ENST00000543114 PXDC1Q5TGL8 231 aa13.73□□□□□ -0.21
CACNA1C-230ENST00000543114 TMEM263Q8WUH6 116 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-230ENST00000543114 MITD1Q8WV92 249 aa13.73□□□□□ -0.21
CACNA1C-230ENST00000543114 RNF141Q8WVD5 230 aa13.73□□□□□ -0.21
CACNA1C-230ENST00000543114 MGST2Q99735 147 aa13.73□□□□□ -0.21
CACNA1C-230ENST00000543114 SLC50A1Q9BRV3 221 aa13.73□□□□□ -0.21
CACNA1C-230ENST00000543114 TIMM8BQ9Y5J9 83 aaPredicted RBP13.73□□□□□ -0.21
CACNA1C-230ENST00000543114 PRAC2D3DTV9 90 aa13.72□□□□□ -0.21
CACNA1C-230ENST00000543114 ZNF701M0R085 212 aaPredicted RBP13.72□□□□□ -0.21
CACNA1C-230ENST00000543114 CCSO14618 274 aa13.72□□□□□ -0.21
CACNA1C-230ENST00000543114 TMEM37Q8WXS4 190 aa13.72□□□□□ -0.21
CACNA1C-230ENST00000543114 GGACTQ9BVM4 153 aa13.72□□□□□ -0.21
CACNA1C-230ENST00000543114 NOP10Q9NPE3 64 aaKnown RBP13.72□□□□□ -0.21
CACNA1C-230ENST00000543114 RNF24Q9Y225 148 aa13.72□□□□□ -0.21
CACNA1C-230ENST00000543114 H7BYZ3 331 aa13.71□□□□□ -0.21
CACNA1C-230ENST00000543114 COX7A2P2O60397 106 aa13.71□□□□□ -0.21
CACNA1C-230ENST00000543114 IL7P13232 177 aa13.71□□□□□ -0.21
CACNA1C-230ENST00000543114 OPCMLQ14982 345 aa13.71□□□□□ -0.21
CACNA1C-230ENST00000543114 GFI1BQ5VTD9 330 aa13.71□□□□□ -0.21
CACNA1C-230ENST00000543114 BPIFA4PQ86YQ2 179 aa13.71□□□□□ -0.21
CACNA1C-230ENST00000543114 LINC00588Q9Y4M8 146 aa13.71□□□□□ -0.21
CACNA1C-230ENST00000543114 CENPXA8MT69 81 aa13.7□□□□□ -0.22
CACNA1C-230ENST00000543114 IGLC2P0DOY2 106 aa13.7□□□□□ -0.22
CACNA1C-230ENST00000543114 ZNF493Q6ZR52 646 aa13.7□□□□□ -0.22
CACNA1C-230ENST00000543114 C20orf85Q9H1P6 137 aa13.7□□□□□ -0.22
CACNA1C-230ENST00000543114 APOBP04114 4563 aaKnown RBP13.7□□□□□ -0.22
CACNA1C-230ENST00000543114 CCL18P55774 89 aa13.69□□□□□ -0.22
CACNA1C-230ENST00000543114 C10orf113Q5VZT2 155 aa13.69□□□□□ -0.22
CACNA1C-230ENST00000543114 C6orf223Q8N319 242 aa13.69□□□□□ -0.22
CACNA1C-230ENST00000543114 C20orf144Q9BQM9 153 aa13.69□□□□□ -0.22
CACNA1C-230ENST00000543114 H3BQ15 152 aa13.68□□□□□ -0.22
CACNA1C-230ENST00000543114 LINC00612Q8N6U2 182 aa13.68□□□□□ -0.22
CACNA1C-230ENST00000543114 OR10J6PQ8NGY7 276 aa13.68□□□□□ -0.22
CACNA1C-230ENST00000543114 KRTAP4-5Q9BYR2 181 aa13.68□□□□□ -0.22
CACNA1C-230ENST00000543114 CAMLGP49069 296 aa13.67□□□□□ -0.22
CACNA1C-230ENST00000543114 CLINT1Q14677 625 aa13.67□□□□□ -0.22
CACNA1C-230ENST00000543114 MIC13Q5XKP0 118 aa13.67□□□□□ -0.22
CACNA1C-230ENST00000543114 SSX7Q7RTT5 188 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms