RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 C1orf158Q8N1D5 194 aa12.53□□□□□ -0.4
LTBR-210ENST00000542830 RNF182Q8N6D2 247 aa12.53□□□□□ -0.4
LTBR-210ENST00000542830 TMEM252Q8N6L7 170 aa12.53□□□□□ -0.4
LTBR-210ENST00000542830 OR11H7Q8NGC8 314 aa12.53□□□□□ -0.4
LTBR-210ENST00000542830 RNF126Q9BV68 326 aa12.53□□□□□ -0.4
LTBR-210ENST00000542830 WDR83OSQ9Y284 106 aa12.53□□□□□ -0.4
LTBR-210ENST00000542830 DEFB131BA0A096LNP1 70 aa12.52□□□□□ -0.41
LTBR-210ENST00000542830 MRPS12O15235 138 aaKnown RBP12.52□□□□□ -0.41
LTBR-210ENST00000542830 PSG3Q16557 428 aa12.52□□□□□ -0.41
LTBR-210ENST00000542830 RRN3P1Q2M238 152 aa12.52□□□□□ -0.41
LTBR-210ENST00000542830 VWC2Q2TAL6 325 aa12.52□□□□□ -0.41
LTBR-210ENST00000542830 C10orf113Q5VZT2 155 aa12.52□□□□□ -0.41
LTBR-210ENST00000542830 LCN15Q6UWW0 184 aa12.52□□□□□ -0.41
LTBR-210ENST00000542830 NRARPQ7Z6K4 114 aa12.52□□□□□ -0.41
LTBR-210ENST00000542830 OR1L4Q8NGR5 311 aa12.52□□□□□ -0.41
LTBR-210ENST00000542830 SLC50A1Q9BRV3 221 aa12.52□□□□□ -0.41
LTBR-210ENST00000542830 TMEM208Q9BTX3 173 aa12.52□□□□□ -0.41
LTBR-210ENST00000542830 KMT2AQ03164 3969 aa12.51□□□□□ -0.41
LTBR-210ENST00000542830 IGHV4-4A0A075B6R2 117 aa12.51□□□□□ -0.41
LTBR-210ENST00000542830 PRAF2O60831 178 aa12.51□□□□□ -0.41
LTBR-210ENST00000542830 EMP1P54849 157 aa12.51□□□□□ -0.41
LTBR-210ENST00000542830 B2MP61769 119 aa12.51□□□□□ -0.41
LTBR-210ENST00000542830 ATP6V1FQ16864 119 aa12.51□□□□□ -0.41
LTBR-210ENST00000542830 ZNF767PQ75MW2 155 aa12.51□□□□□ -0.41
LTBR-210ENST00000542830 TMEM37Q8WXS4 190 aa12.51□□□□□ -0.41
LTBR-210ENST00000542830 PFDN5Q99471 154 aa12.51□□□□□ -0.41
LTBR-210ENST00000542830 DNAJC4Q9NNZ3 241 aa12.51□□□□□ -0.41
LTBR-210ENST00000542830 EPPK1P58107 5090 aaKnown RBP12.51□□□□□ -0.41
LTBR-210ENST00000542830 LOC102723971A0A1B0GUV8 181 aa12.5□□□□□ -0.41
LTBR-210ENST00000542830 IGSF23A1L1A6 192 aa12.5□□□□□ -0.41
LTBR-210ENST00000542830 INSP01308 110 aa12.5□□□□□ -0.41
LTBR-210ENST00000542830 PRR20EP86478 221 aa12.5□□□□□ -0.41
LTBR-210ENST00000542830 PRR20CP86479 221 aa12.5□□□□□ -0.41
LTBR-210ENST00000542830 PRR20DP86480 221 aa12.5□□□□□ -0.41
LTBR-210ENST00000542830 PRR20BP86481 221 aa12.5□□□□□ -0.41
LTBR-210ENST00000542830 PRR20AP86496 221 aa12.5□□□□□ -0.41
LTBR-210ENST00000542830 SPINK13Q1W4C9 94 aa12.5□□□□□ -0.41
LTBR-210ENST00000542830 MIC13Q5XKP0 118 aa12.5□□□□□ -0.41
LTBR-210ENST00000542830 OR8A1Q8NGG7 326 aa12.5□□□□□ -0.41
LTBR-210ENST00000542830 DKK2Q9UBU2 259 aa12.5□□□□□ -0.41
LTBR-210ENST00000542830 UBE2L5PA0A1B0GUS4 154 aa12.49□□□□□ -0.41
LTBR-210ENST00000542830 BOLA2-SMG1P6H3BVE0 249 aa12.49□□□□□ -0.41
LTBR-210ENST00000542830 M0R2Z0 102 aa12.49□□□□□ -0.41
LTBR-210ENST00000542830 RLN2P04090 185 aa12.49□□□□□ -0.41
LTBR-210ENST00000542830 RPL29P47914 159 aaKnown RBP12.49□□□□□ -0.41
LTBR-210ENST00000542830 RHOBP62745 196 aa12.49□□□□□ -0.41
LTBR-210ENST00000542830 HIST1H1AQ02539 215 aaPredicted RBP12.49□□□□□ -0.41
LTBR-210ENST00000542830 BAXQ07812 192 aa12.49□□□□□ -0.41
LTBR-210ENST00000542830 RPP25LQ8N5L8 163 aaKnown RBP12.49□□□□□ -0.41
LTBR-210ENST00000542830 CHAC2Q8WUX2 184 aa12.49□□□□□ -0.41
LTBR-210ENST00000542830 RPUSD4Q96CM3 377 aaKnown RBP12.49□□□□□ -0.41
LTBR-210ENST00000542830 NIPSNAP3BQ9BS92 247 aa12.49□□□□□ -0.41
LTBR-210ENST00000542830 NMES1Q9C002 83 aa12.49□□□□□ -0.41
LTBR-210ENST00000542830 ZNF331Q9NQX6 463 aaPredicted RBP12.49□□□□□ -0.41
LTBR-210ENST00000542830 PPP1R14DQ9NXH3 145 aa12.49□□□□□ -0.41
LTBR-210ENST00000542830 VPS13DQ5THJ4 4388 aa12.48□□□□□ -0.41
LTBR-210ENST00000542830 INMT-MINDY4F8WBC2 141 aa12.48□□□□□ -0.41
LTBR-210ENST00000542830 IFITM3Q01628 133 aa12.48□□□□□ -0.41
LTBR-210ENST00000542830 OPCMLQ14982 345 aa12.48□□□□□ -0.41
LTBR-210ENST00000542830 FAM222AQ5U5X8 452 aa12.48□□□□□ -0.41
LTBR-210ENST00000542830 SLC39A9Q9NUM3 307 aa12.48□□□□□ -0.41
LTBR-210ENST00000542830 PXMP4Q9Y6I8 212 aa12.48□□□□□ -0.41
LTBR-210ENST00000542830 CRXO43186 299 aaPredicted RBP12.47□□□□□ -0.41
LTBR-210ENST00000542830 MPDU1O75352 247 aa12.47□□□□□ -0.41
LTBR-210ENST00000542830 FGF7P21781 194 aa12.47□□□□□ -0.41
LTBR-210ENST00000542830 DEFA1P59665 94 aa12.47□□□□□ -0.41
LTBR-210ENST00000542830 DEFA3P59666 94 aa12.47□□□□□ -0.41
LTBR-210ENST00000542830 CYCSP99999 105 aaKnown RBP12.47□□□□□ -0.41
LTBR-210ENST00000542830 OXA1LQ15070 435 aa12.47□□□□□ -0.41
LTBR-210ENST00000542830 GUK1Q16774 197 aa12.47□□□□□ -0.41
LTBR-210ENST00000542830 MORN5Q5VZ52 161 aa12.47□□□□□ -0.41
LTBR-210ENST00000542830 NDUFAF3Q9BU61 184 aa12.47□□□□□ -0.41
LTBR-210ENST00000542830 SLC25A31Q9H0C2 315 aa12.47□□□□□ -0.41
LTBR-210ENST00000542830 YTHDF2Q9Y5A9 579 aaKnown RBP12.47□□□□□ -0.41
LTBR-210ENST00000542830 E5RGE8 158 aa12.46□□□□□ -0.41
LTBR-210ENST00000542830 IGLC2P0DOY2 106 aa12.46□□□□□ -0.41
LTBR-210ENST00000542830 BAP18Q8IXM2 172 aa12.46□□□□□ -0.41
LTBR-210ENST00000542830 TMEM256Q8N2U0 113 aa12.46□□□□□ -0.41
LTBR-210ENST00000542830 FAM210BQ96KR6 192 aa12.46□□□□□ -0.41
LTBR-210ENST00000542830 SIX6O95475 246 aa12.45□□□□□ -0.42
LTBR-210ENST00000542830 TSPOP30536 169 aa12.45□□□□□ -0.42
LTBR-210ENST00000542830 MARVELD1Q9BSK0 173 aa12.45□□□□□ -0.42
LTBR-210ENST00000542830 BATF3Q9NR55 127 aa12.45□□□□□ -0.42
LTBR-210ENST00000542830 TRAV12-2A0A075B6T6 113 aa12.44□□□□□ -0.42
LTBR-210ENST00000542830 ZNF253O75346 499 aa12.44□□□□□ -0.42
LTBR-210ENST00000542830 SNRPCP09234 159 aaKnown RBP12.44□□□□□ -0.42
LTBR-210ENST00000542830 CDKN1BP46527 198 aa12.44□□□□□ -0.42
LTBR-210ENST00000542830 OR10J6PQ8NGY7 276 aa12.44□□□□□ -0.42
LTBR-210ENST00000542830 SAT2Q96F10 170 aaPredicted RBP12.44□□□□□ -0.42
LTBR-210ENST00000542830 NPCDR1Q9BY65 106 aa12.44□□□□□ -0.42
LTBR-210ENST00000542830 BIRC6Q9NR09 4857 aa12.43□□□□□ -0.42
LTBR-210ENST00000542830 TRAV5A0A0B4J249 113 aa12.43□□□□□ -0.42
LTBR-210ENST00000542830 LYRM9A8MSI8 78 aa12.43□□□□□ -0.42
LTBR-210ENST00000542830 ZNF705GA8MUZ8 300 aaPredicted RBP12.43□□□□□ -0.42
LTBR-210ENST00000542830 H3BQ15 152 aa12.43□□□□□ -0.42
LTBR-210ENST00000542830 SLC17A3O00476 420 aa12.43□□□□□ -0.42
LTBR-210ENST00000542830 P0DMU3 169 aa12.43□□□□□ -0.42
LTBR-210ENST00000542830 FAM231AP0DMU4 169 aa12.43□□□□□ -0.42
LTBR-210ENST00000542830 FAM231CP0DMU5 169 aa12.43□□□□□ -0.42
LTBR-210ENST00000542830 DAD1P61803 113 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms