RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 C11orf52Q96A22 123 aa11.44□□□□□ -0.58
SFSWAP-210ENST00000541286 GTSF1LQ9H1H1 148 aa11.44□□□□□ -0.58
SFSWAP-210ENST00000541286 TRBV9A0A0B4J1U6 114 aa11.44□□□□□ -0.58
SFSWAP-210ENST00000541286 ISLRO14498 428 aa11.44□□□□□ -0.58
SFSWAP-210ENST00000541286 SLC25A5P05141 298 aaKnown RBP11.44□□□□□ -0.58
SFSWAP-210ENST00000541286 DEFB125Q8N687 156 aa11.44□□□□□ -0.58
SFSWAP-210ENST00000541286 FER1L6-AS1Q8NA97 138 aa11.44□□□□□ -0.58
SFSWAP-210ENST00000541286 MRPL36Q9P0J6 103 aaKnown RBP11.44□□□□□ -0.58
SFSWAP-210ENST00000541286 CFHR2P36980 270 aa11.43□□□□□ -0.58
SFSWAP-210ENST00000541286 WT1-ASQ06250 92 aa11.43□□□□□ -0.58
SFSWAP-210ENST00000541286 PGLYRP4Q96LB8 373 aa11.43□□□□□ -0.58
SFSWAP-210ENST00000541286 ZNF714Q96N38 554 aa11.43□□□□□ -0.58
SFSWAP-210ENST00000541286 AP1S3Q96PC3 154 aa11.43□□□□□ -0.58
SFSWAP-210ENST00000541286 NIPBLQ6KC79 2804 aaeCLIP11.43□□□□□ -0.581e-6■□□□□ 10
SFSWAP-210ENST00000541286 IZUMO1RA6ND01 250 aa11.43□□□□□ -0.58
SFSWAP-210ENST00000541286 IGHV4-39P01824 125 aa11.43□□□□□ -0.58
SFSWAP-210ENST00000541286 RITA1Q96K30 269 aa11.43□□□□□ -0.58
SFSWAP-210ENST00000541286 CCL19Q99731 98 aa11.43□□□□□ -0.58
SFSWAP-210ENST00000541286 SMAGPQ0VAQ4 97 aa11.43□□□□□ -0.58
SFSWAP-210ENST00000541286 CR1LQ2VPA4 569 aa11.43□□□□□ -0.58
SFSWAP-210ENST00000541286 LINC00305Q7Z4B0 112 aa11.43□□□□□ -0.58
SFSWAP-210ENST00000541286 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.43□□□□□ -0.58
SFSWAP-210ENST00000541286 SYS1-DBNDD2H3BUS1 97 aa11.42□□□□□ -0.58
SFSWAP-210ENST00000541286 TMEM200BQ69YZ2 307 aa11.42□□□□□ -0.58
SFSWAP-210ENST00000541286 SLC25A2Q9BXI2 301 aa11.42□□□□□ -0.58
SFSWAP-210ENST00000541286 IGHV1-24A0A0C4DH33 117 aa11.42□□□□□ -0.58
SFSWAP-210ENST00000541286 CTSZQ9UBR2 303 aa11.42□□□□□ -0.58
SFSWAP-210ENST00000541286 SMIM27A0A1W2PRY6 76 aa11.41□□□□□ -0.58
SFSWAP-210ENST00000541286 PGPA6NDG6 321 aa11.41□□□□□ -0.58
SFSWAP-210ENST00000541286 C2orf83Q53S99 150 aa11.41□□□□□ -0.58
SFSWAP-210ENST00000541286 OSTCQ9NRP0 149 aa11.41□□□□□ -0.58
SFSWAP-210ENST00000541286 HIVEP1P15822 2718 aa11.41□□□□□ -0.58
SFSWAP-210ENST00000541286 TMEM178BH3BS89 294 aa11.41□□□□□ -0.58
SFSWAP-210ENST00000541286 MEF2CQ06413 473 aaPredicted RBP11.41□□□□□ -0.58
SFSWAP-210ENST00000541286 TPPP3Q9BW30 176 aa11.41□□□□□ -0.58
SFSWAP-210ENST00000541286 ZNF257Q9Y2Q1 563 aa11.41□□□□□ -0.58
SFSWAP-210ENST00000541286 TNFRSF1AP19438 455 aa11.41□□□□□ -0.58
SFSWAP-210ENST00000541286 RUSC1-AS1Q66K80 236 aa11.41□□□□□ -0.58
SFSWAP-210ENST00000541286 C5orf17Q8NAS9 161 aa11.41□□□□□ -0.58
SFSWAP-210ENST00000541286 OR4A5Q8NH83 315 aa11.41□□□□□ -0.58
SFSWAP-210ENST00000541286 JMJD8Q96S16 334 aa11.41□□□□□ -0.58
SFSWAP-210ENST00000541286 TRAV9-1A0A075B6T8 112 aa11.4□□□□□ -0.58
SFSWAP-210ENST00000541286 A0A1W2PRE2 83 aa11.4□□□□□ -0.58
SFSWAP-210ENST00000541286 GPR183P32249 361 aa11.4□□□□□ -0.58
SFSWAP-210ENST00000541286 WFDC3Q8IUB2 231 aa11.4□□□□□ -0.58
SFSWAP-210ENST00000541286 BPESC1Q9GZL8 116 aa11.4□□□□□ -0.58
SFSWAP-210ENST00000541286 F11RQ9Y624 299 aaKnown RBP11.4□□□□□ -0.58
SFSWAP-210ENST00000541286 PPIAL4EA0A075B759 164 aa11.4□□□□□ -0.58
SFSWAP-210ENST00000541286 A0A1W2PRD5 423 aa11.4□□□□□ -0.58
SFSWAP-210ENST00000541286 A0A1W2PRF3 423 aa11.4□□□□□ -0.58
SFSWAP-210ENST00000541286 A0A1W2PRM7 423 aa11.4□□□□□ -0.58
SFSWAP-210ENST00000541286 VSTM5A8MXK1 200 aa11.4□□□□□ -0.58
SFSWAP-210ENST00000541286 PEX7O00628 323 aa11.4□□□□□ -0.58
SFSWAP-210ENST00000541286 NDUFB3O43676 98 aa11.4□□□□□ -0.58
SFSWAP-210ENST00000541286 PPIAL4FP0DN26 164 aa11.4□□□□□ -0.58
SFSWAP-210ENST00000541286 ATP5J2P56134 94 aa11.4□□□□□ -0.58
SFSWAP-210ENST00000541286 ARF6P62330 175 aa11.4□□□□□ -0.58
SFSWAP-210ENST00000541286 Q71RC1 249 aaPredicted RBP11.4□□□□□ -0.58
SFSWAP-210ENST00000541286 PDPNQ86YL7 162 aa11.4□□□□□ -0.58
SFSWAP-210ENST00000541286 LINC00312Q9Y6C7 94 aa11.4□□□□□ -0.58
SFSWAP-210ENST00000541286 IGLC1P0CG04 106 aa11.39□□□□□ -0.59
SFSWAP-210ENST00000541286 CNTFRP26992 372 aa11.39□□□□□ -0.59
SFSWAP-210ENST00000541286 HTR1DP28221 377 aa11.39□□□□□ -0.59
SFSWAP-210ENST00000541286 PATE2Q6UY27 113 aa11.39□□□□□ -0.59
SFSWAP-210ENST00000541286 MTURNQ8N3F0 131 aa11.39□□□□□ -0.59
SFSWAP-210ENST00000541286 OR4C13Q8NGP0 309 aa11.39□□□□□ -0.59
SFSWAP-210ENST00000541286 FAM167A-AS1Q96KT0 104 aa11.39□□□□□ -0.59
SFSWAP-210ENST00000541286 NDUFA4L2Q9NRX3 87 aa11.39□□□□□ -0.59
SFSWAP-210ENST00000541286 JMJD1CQ15652 2540 aa11.39□□□□□ -0.59
SFSWAP-210ENST00000541286 NCR2O95944 276 aa11.39□□□□□ -0.59
SFSWAP-210ENST00000541286 COX7A1P24310 79 aa11.39□□□□□ -0.59
SFSWAP-210ENST00000541286 C12orf54Q6X4T0 127 aa11.39□□□□□ -0.59
SFSWAP-210ENST00000541286 OSR1Q8TAX0 266 aaPredicted RBP11.39□□□□□ -0.59
SFSWAP-210ENST00000541286 TMEM186Q96B77 213 aa11.39□□□□□ -0.59
SFSWAP-210ENST00000541286 SMIM12Q96EX1 92 aa11.39□□□□□ -0.59
SFSWAP-210ENST00000541286 THYN1Q9P016 225 aa11.39□□□□□ -0.59
SFSWAP-210ENST00000541286 DTX2Q86UW9 622 aa11.39□□□□□ -0.59
SFSWAP-210ENST00000541286 PEF1Q9UBV8 284 aaKnown RBP11.39□□□□□ -0.59
SFSWAP-210ENST00000541286 TRAV8-1A0A0A6YYK1 113 aa11.38□□□□□ -0.59
SFSWAP-210ENST00000541286 SUB1P53999 127 aaKnown RBP eCLIP11.38□□□□□ -0.59
SFSWAP-210ENST00000541286 S4R3C0 116 aa11.38□□□□□ -0.59
SFSWAP-210ENST00000541286 DSCAML1Q8TD84 2053 aa11.38□□□□□ -0.59
SFSWAP-210ENST00000541286 LOC389332A0A1B0GUA5 103 aa11.38□□□□□ -0.59
SFSWAP-210ENST00000541286 PLGLAQ15195 96 aa11.38□□□□□ -0.59
SFSWAP-210ENST00000541286 FAM71F2Q6NXP2 309 aa11.38□□□□□ -0.59
SFSWAP-210ENST00000541286 LINC00322Q6ZN03 302 aaPredicted RBP11.38□□□□□ -0.59
SFSWAP-210ENST00000541286 OR8A1Q8NGG7 326 aa11.38□□□□□ -0.59
SFSWAP-210ENST00000541286 TMUB1Q9BVT8 246 aa11.38□□□□□ -0.59
SFSWAP-210ENST00000541286 LY96Q9Y6Y9 160 aa11.38□□□□□ -0.59
SFSWAP-210ENST00000541286 GATA4P43694 442 aa11.37□□□□□ -0.59
SFSWAP-210ENST00000541286 LYZP61626 148 aa11.37□□□□□ -0.59
SFSWAP-210ENST00000541286 POU2AF1Q16633 256 aa11.37□□□□□ -0.59
SFSWAP-210ENST00000541286 FAM120AOSQ5T036 256 aa11.37□□□□□ -0.59
SFSWAP-210ENST00000541286 RAB1BQ9H0U4 201 aa11.37□□□□□ -0.59
SFSWAP-210ENST00000541286 MRPL27Q9P0M9 148 aaKnown RBP11.37□□□□□ -0.59
SFSWAP-210ENST00000541286 IGHV4-30-2A0A087WSY4 118 aa11.37□□□□□ -0.59
SFSWAP-210ENST00000541286 A0A1W2PPI3 338 aa11.37□□□□□ -0.59
SFSWAP-210ENST00000541286 PAX2Q02962 417 aa11.37□□□□□ -0.59
SFSWAP-210ENST00000541286 ZNF329Q86UD4 541 aa11.37□□□□□ -0.59
SFSWAP-210ENST00000541286 IGF2BP2-AS1Q96M15 143 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms