RNA–Protein interactions for RNA: ENST00000541260.5

CCDC189-204, Transcript of coiled-coil domain containing 189, human

TSL 5 BASIC

Gene CCDC189, Length 1,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC189-204	ENST00000541260		A0A1W2PPV4	95 aa		12.5	□□□□□ -0.41
CCDC189-204	ENST00000541260	RBMY1B	A6NDE4	496 aa	Known RBP	12.5	□□□□□ -0.41
CCDC189-204	ENST00000541260	RBMY1E	A6NEQ0	496 aa	Known RBP	12.5	□□□□□ -0.41
CCDC189-204	ENST00000541260	ZNF253	O75346	499 aa		12.5	□□□□□ -0.41
CCDC189-204	ENST00000541260	RBMY1D	P0C7P1	496 aa	Known RBP	12.5	□□□□□ -0.41
CCDC189-204	ENST00000541260	TMEM41B	Q5BJD5	291 aa		12.5	□□□□□ -0.41
CCDC189-204	ENST00000541260	LRRC20	Q8TCA0	184 aa		12.5	□□□□□ -0.41
CCDC189-204	ENST00000541260	SLC50A1	Q9BRV3	221 aa		12.5	□□□□□ -0.41
CCDC189-204	ENST00000541260	OR51M1	Q9H341	326 aa		12.5	□□□□□ -0.41
CCDC189-204	ENST00000541260	ZNF331	Q9NQX6	463 aa	Predicted RBP	12.5	□□□□□ -0.41
CCDC189-204	ENST00000541260	RPRM	Q9NS64	109 aa		12.5	□□□□□ -0.41
CCDC189-204	ENST00000541260	ZNF586	Q9NXT0	402 aa		12.5	□□□□□ -0.41
CCDC189-204	ENST00000541260	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	12.49	□□□□□ -0.41
CCDC189-204	ENST00000541260	SEC11B	P0C7V7	166 aa		12.49	□□□□□ -0.41
CCDC189-204	ENST00000541260	PYY	P10082	97 aa		12.49	□□□□□ -0.41
CCDC189-204	ENST00000541260	PDE6H	Q13956	83 aa		12.49	□□□□□ -0.41
CCDC189-204	ENST00000541260	KHDC3L	Q587J8	217 aa		12.49	□□□□□ -0.41
CCDC189-204	ENST00000541260	C9orf62	Q8N4C0	152 aa		12.49	□□□□□ -0.41
CCDC189-204	ENST00000541260	STOML3	Q8TAV4	291 aa		12.49	□□□□□ -0.41
CCDC189-204	ENST00000541260	LINC00052	Q96N35	136 aa		12.49	□□□□□ -0.41
CCDC189-204	ENST00000541260	CLEC5A	Q9NY25	188 aa		12.49	□□□□□ -0.41
CCDC189-204	ENST00000541260	TRBV19	A0A075B6N1	114 aa		12.48	□□□□□ -0.41
CCDC189-204	ENST00000541260	FAM122C	Q6P4D5	195 aa		12.48	□□□□□ -0.41
CCDC189-204	ENST00000541260	BAP18	Q8IXM2	172 aa		12.48	□□□□□ -0.41
CCDC189-204	ENST00000541260	ZNF503	Q96F45	646 aa		12.48	□□□□□ -0.41
CCDC189-204	ENST00000541260	PAXX	Q9BUH6	204 aa		12.48	□□□□□ -0.41
CCDC189-204	ENST00000541260	PRKDC	P78527	4128 aa	Known RBP	12.48	□□□□□ -0.41
CCDC189-204	ENST00000541260	SNRPC	P09234	159 aa	Known RBP	12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	TPT1	P13693	172 aa	Known RBP	12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	CDC34	P49427	236 aa	Predicted RBP	12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	PQLC2	Q6ZP29	291 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	SBSPON	Q8IVN8	264 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	RNF141	Q8WVD5	230 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	RAB24	Q969Q5	203 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	FXYD5	Q96DB9	178 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	C20orf173	Q96LM9	149 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	ACTR3C	Q9C0K3	210 aa	Predicted RBP	12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	KIR2DL5B	A0A0G2JN68	375 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	KIR2DL5B	A0A0G2JPC4	375 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	SLC17A3	O00476	420 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	OR7C2	O60412	319 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	NBEAP1	P0C6P0	100 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	STAG3L2	P0CL84	134 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	STAG3L3	P0CL85	134 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	C4BPB	P20851	252 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	PSG3	Q16557	428 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	HAGH	Q16775	308 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	AKR1C8P	Q5T2L2	129 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	FOXI2	Q6ZQN5	318 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	KIR2DL5A	Q8N109	375 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	KIR2DL5B	Q8NHK3	375 aa		12.47	□□□□□ -0.41
CCDC189-204	ENST00000541260	KNCN	A6PVL3	124 aa		12.46	□□□□□ -0.42
CCDC189-204	ENST00000541260		H3BTX0	84 aa		12.46	□□□□□ -0.42
CCDC189-204	ENST00000541260	NDUFB4	O95168	129 aa		12.46	□□□□□ -0.42
CCDC189-204	ENST00000541260	IGFL4	Q6B9Z1	124 aa		12.46	□□□□□ -0.42
CCDC189-204	ENST00000541260	TRPT1	Q86TN4	253 aa	Known RBP	12.46	□□□□□ -0.42
CCDC189-204	ENST00000541260	SLC51B	Q86UW2	128 aa		12.46	□□□□□ -0.42
CCDC189-204	ENST00000541260	STH	Q8IWL8	128 aa		12.46	□□□□□ -0.42
CCDC189-204	ENST00000541260	RNF182	Q8N6D2	247 aa		12.46	□□□□□ -0.42
CCDC189-204	ENST00000541260	SAV1	Q9H4B6	383 aa	Predicted RBP	12.46	□□□□□ -0.42
CCDC189-204	ENST00000541260	UMAD1	C9J7I0	102 aa		12.45	□□□□□ -0.42
CCDC189-204	ENST00000541260		H3BMM0	161 aa		12.45	□□□□□ -0.42
CCDC189-204	ENST00000541260	OR10J4	P0C629	311 aa		12.45	□□□□□ -0.42
CCDC189-204	ENST00000541260	NHLRC4	P0CG21	123 aa	Predicted RBP	12.45	□□□□□ -0.42
CCDC189-204	ENST00000541260	HLA-DRB4	P13762	266 aa		12.45	□□□□□ -0.42
CCDC189-204	ENST00000541260	APOC4	P55056	127 aa		12.45	□□□□□ -0.42
CCDC189-204	ENST00000541260	PSG9	Q00887	426 aa		12.45	□□□□□ -0.42
CCDC189-204	ENST00000541260	ACTL10	Q5JWF8	245 aa		12.45	□□□□□ -0.42
CCDC189-204	ENST00000541260	HLA-DRB4	X5D2U9	266 aa		12.45	□□□□□ -0.42
CCDC189-204	ENST00000541260	CTXND1	A0A1B0GTU2	59 aa		12.44	□□□□□ -0.42
CCDC189-204	ENST00000541260	EIF3G	O75821	320 aa	Known RBP eCLIP	12.44	□□□□□ -0.42
CCDC189-204	ENST00000541260	RPL35A	P18077	110 aa	Known RBP	12.44	□□□□□ -0.42
CCDC189-204	ENST00000541260	UBE2L3	P68036	154 aa	Known RBP	12.44	□□□□□ -0.42
CCDC189-204	ENST00000541260	EBLN2	Q6P2I7	272 aa		12.44	□□□□□ -0.42
CCDC189-204	ENST00000541260	BLNK	Q8WV28	456 aa		12.44	□□□□□ -0.42
CCDC189-204	ENST00000541260	CLUHP3	Q96NS8	147 aa		12.44	□□□□□ -0.42
CCDC189-204	ENST00000541260	PLA2G2E	Q9NZK7	142 aa		12.44	□□□□□ -0.42
CCDC189-204	ENST00000541260		A0A0J9YX75	114 aa		12.43	□□□□□ -0.42
CCDC189-204	ENST00000541260	UBE2C	O00762	179 aa		12.43	□□□□□ -0.42
CCDC189-204	ENST00000541260	HLA-DMB	P28068	263 aa		12.43	□□□□□ -0.42
CCDC189-204	ENST00000541260	DEFB1	P60022	68 aa		12.43	□□□□□ -0.42
CCDC189-204	ENST00000541260	ZNF726P1	Q15940	193 aa		12.43	□□□□□ -0.42
CCDC189-204	ENST00000541260	GDF5OS	Q5U4N7	250 aa		12.43	□□□□□ -0.42
CCDC189-204	ENST00000541260	EIF5AL1	Q6IS14	154 aa	Known RBP	12.43	□□□□□ -0.42
CCDC189-204	ENST00000541260	LYPD1	Q8N2G4	141 aa		12.43	□□□□□ -0.42
CCDC189-204	ENST00000541260	MRPL53	Q96EL3	112 aa	Known RBP	12.43	□□□□□ -0.42
CCDC189-204	ENST00000541260	ASCL2	Q99929	193 aa		12.43	□□□□□ -0.42
CCDC189-204	ENST00000541260	TM2D3	Q9BRN9	247 aa		12.43	□□□□□ -0.42
CCDC189-204	ENST00000541260	CSTL1	Q9H114	145 aa		12.43	□□□□□ -0.42
CCDC189-204	ENST00000541260	HMGB3	O15347	200 aa	Known RBP	12.42	□□□□□ -0.42
CCDC189-204	ENST00000541260	ARL14EPL	P0DKL9	152 aa		12.42	□□□□□ -0.42
CCDC189-204	ENST00000541260	SSX7	Q7RTT5	188 aa		12.42	□□□□□ -0.42
CCDC189-204	ENST00000541260	ZNF738	Q8NE65	137 aa		12.42	□□□□□ -0.42
CCDC189-204	ENST00000541260	SUN5	Q8TC36	379 aa		12.42	□□□□□ -0.42
CCDC189-204	ENST00000541260	RPUSD4	Q96CM3	377 aa	Known RBP	12.42	□□□□□ -0.42
CCDC189-204	ENST00000541260	PRELID1	Q9Y255	219 aa		12.42	□□□□□ -0.42
CCDC189-204	ENST00000541260		A8MTW9	85 aa		12.42	□□□□□ -0.42
CCDC189-204	ENST00000541260		F6UB75	175 aa		12.42	□□□□□ -0.42
CCDC189-204	ENST00000541260	CXorf1	O96002	111 aa		12.42	□□□□□ -0.42
CCDC189-204	ENST00000541260	MORN3	Q6PF18	240 aa	Predicted RBP	12.42	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms