RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 X6R8D5 127 aa9.51□□□□□ -0.89
LTBR-208ENST00000541005 STARD9Q9P2P6 4700 aa9.51□□□□□ -0.89
LTBR-208ENST00000541005 RPL12P30050 165 aaKnown RBP9.5□□□□□ -0.89
LTBR-208ENST00000541005 PSG9Q00887 426 aa9.5□□□□□ -0.89
LTBR-208ENST00000541005 FGL1Q08830 312 aa9.5□□□□□ -0.89
LTBR-208ENST00000541005 FCN2Q15485 313 aa9.5□□□□□ -0.89
LTBR-208ENST00000541005 RGS21Q2M5E4 152 aa9.5□□□□□ -0.89
LTBR-208ENST00000541005 AMTNQ6UX39 209 aa9.5□□□□□ -0.89
LTBR-208ENST00000541005 ZNF705AQ6ZN79 300 aaPredicted RBP9.5□□□□□ -0.89
LTBR-208ENST00000541005 MED28Q9H204 178 aa9.5□□□□□ -0.89
LTBR-208ENST00000541005 ZNF331Q9NQX6 463 aaPredicted RBP9.5□□□□□ -0.89
LTBR-208ENST00000541005 CLEC5AQ9NY25 188 aa9.5□□□□□ -0.89
LTBR-208ENST00000541005 XCL2Q9UBD3 114 aa9.5□□□□□ -0.89
LTBR-208ENST00000541005 IGHV4-28A0A0C4DH34 117 aa9.49□□□□□ -0.89
LTBR-208ENST00000541005 DUSP14O95147 198 aaKnown RBP9.49□□□□□ -0.89
LTBR-208ENST00000541005 PSG3Q16557 428 aa9.49□□□□□ -0.89
LTBR-208ENST00000541005 GUK1Q16774 197 aa9.49□□□□□ -0.89
LTBR-208ENST00000541005 IGFL4Q6B9Z1 124 aa9.49□□□□□ -0.89
LTBR-208ENST00000541005 ZNF738Q8NE65 137 aa9.49□□□□□ -0.89
LTBR-208ENST00000541005 OR4B1Q8NGF8 309 aa9.49□□□□□ -0.89
LTBR-208ENST00000541005 NEU1Q99519 415 aa9.49□□□□□ -0.89
LTBR-208ENST00000541005 PARD6GQ9BYG4 376 aaPredicted RBP9.49□□□□□ -0.89
LTBR-208ENST00000541005 TMEM14CQ9P0S9 112 aa9.49□□□□□ -0.89
LTBR-208ENST00000541005 DYNC2H1Q8NCM8 4307 aaKnown RBP9.49□□□□□ -0.89
LTBR-208ENST00000541005 NUPR2A6NF83 97 aa9.48□□□□□ -0.89
LTBR-208ENST00000541005 ZNF705FA8MVS1 300 aaPredicted RBP9.48□□□□□ -0.89
LTBR-208ENST00000541005 H3BQ15 152 aa9.48□□□□□ -0.89
LTBR-208ENST00000541005 ZNF253O75346 499 aa9.48□□□□□ -0.89
LTBR-208ENST00000541005 IGKV3-20P01619 116 aa9.48□□□□□ -0.89
LTBR-208ENST00000541005 ZNF705DP0CH99 300 aaPredicted RBP9.48□□□□□ -0.89
LTBR-208ENST00000541005 ZNF705BP0CI00 300 aaPredicted RBP9.48□□□□□ -0.89
LTBR-208ENST00000541005 RBMY1A1P0DJD3 496 aaKnown RBP9.48□□□□□ -0.89
LTBR-208ENST00000541005 RBMY1CP0DJD4 496 aa9.48□□□□□ -0.89
LTBR-208ENST00000541005 CNN1P51911 297 aaKnown RBP9.48□□□□□ -0.89
LTBR-208ENST00000541005 OXA1LQ15070 435 aa9.48□□□□□ -0.89
LTBR-208ENST00000541005 RBMY1FQ15415 496 aaKnown RBP9.48□□□□□ -0.89
LTBR-208ENST00000541005 SAT2Q96F10 170 aaPredicted RBP9.48□□□□□ -0.89
LTBR-208ENST00000541005 MFFQ9GZY8 342 aa9.48□□□□□ -0.89
LTBR-208ENST00000541005 SLC35B3Q9H1N7 401 aa9.48□□□□□ -0.89
LTBR-208ENST00000541005 TRAV5A0A0B4J249 113 aa9.47□□□□□ -0.89
LTBR-208ENST00000541005 LCE6AA0A183 80 aa9.47□□□□□ -0.89
LTBR-208ENST00000541005 CXorf65A6NEN9 183 aa9.47□□□□□ -0.89
LTBR-208ENST00000541005 C17orf112F2Z3M2 114 aa9.47□□□□□ -0.89
LTBR-208ENST00000541005 SLC17A3O00476 420 aa9.47□□□□□ -0.89
LTBR-208ENST00000541005 AMBPP02760 352 aa9.47□□□□□ -0.89
LTBR-208ENST00000541005 GIPP09681 153 aaPredicted RBP9.47□□□□□ -0.89
LTBR-208ENST00000541005 HLA-DMBP28068 263 aa9.47□□□□□ -0.89
LTBR-208ENST00000541005 GCSAMLQ5JQS6 135 aa9.47□□□□□ -0.89
LTBR-208ENST00000541005 OR8A1Q8NGG7 326 aa9.47□□□□□ -0.89
LTBR-208ENST00000541005 LRRC20Q8TCA0 184 aa9.47□□□□□ -0.89
LTBR-208ENST00000541005 SMIM9A6NGZ8 99 aa9.46□□□□□ -0.9
LTBR-208ENST00000541005 DEFB4AO15263 64 aa9.46□□□□□ -0.9
LTBR-208ENST00000541005 FXYD7P58549 80 aa9.46□□□□□ -0.9
LTBR-208ENST00000541005 PDE6HQ13956 83 aa9.46□□□□□ -0.9
LTBR-208ENST00000541005 CEMP1Q6PRD7 247 aaPredicted RBP9.46□□□□□ -0.9
LTBR-208ENST00000541005 C11orf45Q8TAV5 145 aa9.46□□□□□ -0.9
LTBR-208ENST00000541005 RPUSD4Q96CM3 377 aaKnown RBP9.46□□□□□ -0.9
LTBR-208ENST00000541005 FAM167A-AS1Q96KT0 104 aa9.46□□□□□ -0.9
LTBR-208ENST00000541005 AQP10Q96PS8 301 aa9.46□□□□□ -0.9
LTBR-208ENST00000541005 SLC25A2Q9BXI2 301 aa9.46□□□□□ -0.9
LTBR-208ENST00000541005 MRPL32Q9BYC8 188 aaKnown RBP9.46□□□□□ -0.9
LTBR-208ENST00000541005 ZNF586Q9NXT0 402 aa9.46□□□□□ -0.9
LTBR-208ENST00000541005 TRBV19A0A075B6N1 114 aa9.45□□□□□ -0.9
LTBR-208ENST00000541005 BOLA2-SMG1P6H3BVE0 249 aa9.45□□□□□ -0.9
LTBR-208ENST00000541005 IFNA5P01569 189 aa9.45□□□□□ -0.9
LTBR-208ENST00000541005 HIST1H1EP10412 219 aaKnown RBP9.45□□□□□ -0.9
LTBR-208ENST00000541005 PMS2P11Q13670 270 aa9.45□□□□□ -0.9
LTBR-208ENST00000541005 MRPL53Q96EL3 112 aaKnown RBP9.45□□□□□ -0.9
LTBR-208ENST00000541005 IGF2BP2-AS1Q96M15 143 aa9.45□□□□□ -0.9
LTBR-208ENST00000541005 SMIM3Q9BZL3 60 aa9.45□□□□□ -0.9
LTBR-208ENST00000541005 WFDC1Q9HC57 220 aa9.45□□□□□ -0.9
LTBR-208ENST00000541005 GOLT1BQ9Y3E0 138 aa9.45□□□□□ -0.9
LTBR-208ENST00000541005 CRXO43186 299 aaPredicted RBP9.44□□□□□ -0.9
LTBR-208ENST00000541005 SNRPCP09234 159 aaKnown RBP9.44□□□□□ -0.9
LTBR-208ENST00000541005 NANOS2P60321 138 aaKnown RBP9.44□□□□□ -0.9
LTBR-208ENST00000541005 HIST1H1AQ02539 215 aaPredicted RBP9.44□□□□□ -0.9
LTBR-208ENST00000541005 MIR17HGQ75NE6 70 aa9.44□□□□□ -0.9
LTBR-208ENST00000541005 C1orf158Q8N1D5 194 aa9.44□□□□□ -0.9
LTBR-208ENST00000541005 SCGB1C1Q8TD33 95 aa9.44□□□□□ -0.9
LTBR-208ENST00000541005 FUT9Q9Y231 359 aa9.44□□□□□ -0.9
LTBR-208ENST00000541005 TIMM9Q9Y5J7 89 aa9.44□□□□□ -0.9
LTBR-208ENST00000541005 H3BTX0 84 aa9.43□□□□□ -0.9
LTBR-208ENST00000541005 NDUFB4O95168 129 aa9.43□□□□□ -0.9
LTBR-208ENST00000541005 INSP01308 110 aa9.43□□□□□ -0.9
LTBR-208ENST00000541005 PYYP10082 97 aa9.43□□□□□ -0.9
LTBR-208ENST00000541005 SPINK13Q1W4C9 94 aa9.43□□□□□ -0.9
LTBR-208ENST00000541005 FFAR4Q5NUL3 377 aa9.43□□□□□ -0.9
LTBR-208ENST00000541005 PHLDA1Q8WV24 401 aaPredicted RBP9.43□□□□□ -0.9
LTBR-208ENST00000541005 LYSTQ99698 3801 aa9.43□□□□□ -0.9
LTBR-208ENST00000541005 KLK5Q9Y337 293 aaPredicted RBP9.43□□□□□ -0.9
LTBR-208ENST00000541005 TMEM189A5PLL7 270 aa9.42□□□□□ -0.9
LTBR-208ENST00000541005 M0R2Z0 102 aa9.42□□□□□ -0.9
LTBR-208ENST00000541005 JTBO76095 146 aa9.42□□□□□ -0.9
LTBR-208ENST00000541005 ZNF266Q14584 549 aa9.42□□□□□ -0.9
LTBR-208ENST00000541005 Q5BKY6 102 aa9.42□□□□□ -0.9
LTBR-208ENST00000541005 FXYD5Q96DB9 178 aa9.42□□□□□ -0.9
LTBR-208ENST00000541005 ODF3Q96PU9 254 aa9.42□□□□□ -0.9
LTBR-208ENST00000541005 PRELID1Q9Y255 219 aa9.42□□□□□ -0.9
LTBR-208ENST00000541005 RFNGQ9Y644 331 aa9.42□□□□□ -0.9
LTBR-208ENST00000541005 C11orf94C9JXX5 98 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms