RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 OR10G6Q8NH81 332 aa2.96□□□□□ -1.94
YBX3-210ENST00000540975 OR51E1Q8TCB6 317 aa2.96□□□□□ -1.94
YBX3-210ENST00000540975 NT5CQ8TCD5 201 aa2.96□□□□□ -1.94
YBX3-210ENST00000540975 KLK6Q92876 244 aa2.96□□□□□ -1.94
YBX3-210ENST00000540975 RBMXL1Q96E39 390 aaKnown RBP2.96□□□□□ -1.94
YBX3-210ENST00000540975 YPEL2Q96QA6 119 aa2.96□□□□□ -1.94
YBX3-210ENST00000540975 SNRNP25Q9BV90 132 aaKnown RBP2.96□□□□□ -1.94
YBX3-210ENST00000540975 TMEM191AQ9H0A3 160 aa2.96□□□□□ -1.94
YBX3-210ENST00000540975 KLF13Q9Y2Y9 288 aaPredicted RBP2.96□□□□□ -1.94
YBX3-210ENST00000540975 SBF1O95248 1867 aa2.96□□□□□ -1.94
YBX3-210ENST00000540975 TSC2P49815 1807 aa2.96□□□□□ -1.94
YBX3-210ENST00000540975 ATG2AQ2TAZ0 1938 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 UNC79Q9P2D8 2635 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 LOC285556D6RIA3 1793 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 RALGAPA2Q2PPJ7 1873 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 IGHV2-26A0A0B4J1V2 119 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 IGHV3-74A0A0B4J1X5 117 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 FAM236AA0A1B0GUQ0 79 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 FAM236BA0A1B0GV22 79 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 TMEM235A6NFC5 223 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 OR51F1A6NGY5 319 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 OR4C45A6NMZ5 311 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 GABARAPH6UMI1 98 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 KLF7O75840 302 aaPredicted RBP2.95□□□□□ -1.94
YBX3-210ENST00000540975 ARL6IP5O75915 188 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 CA2P00918 260 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 HRASP01112 189 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 KRASP01116 189 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 TNFP01375 233 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 MT-ATP8P03928 68 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 LINC00032P0C843 101 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 PGA5P0DJD9 388 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 BCL2P10415 239 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 IFITM1P13164 125 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 CRYBB3P26998 211 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 PFN2P35080 140 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 ZNF93P35789 620 aaPredicted RBP2.95□□□□□ -1.94
YBX3-210ENST00000540975 SRP14P37108 136 aaKnown RBP2.95□□□□□ -1.94
YBX3-210ENST00000540975 CCR2P41597 374 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 RND2P52198 227 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 LOXL1Q08397 574 aaPredicted RBP2.95□□□□□ -1.94
YBX3-210ENST00000540975 DIAPH2-AS1Q14236 149 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 AADACL3Q5VUY0 350 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 NCBP2-AS2Q69YL0 99 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 Q6AWC8 147 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 MRPL54Q6P161 138 aaKnown RBP2.95□□□□□ -1.94
YBX3-210ENST00000540975 TMEM14EPQ6UXP3 125 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 TCF23Q7RTU1 214 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 LHFPL1Q86WI0 220 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 NPWQ8N729 165 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 NUP35Q8NFH5 326 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 OR4C16Q8NGL9 310 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 OR8S1Q8NH09 359 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 OR4A5Q8NH83 315 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 SLC25A40Q8TBP6 338 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 RTN4IP1Q8WWV3 396 aaPredicted RBP2.95□□□□□ -1.94
YBX3-210ENST00000540975 MTFP1Q9UDX5 166 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 CITO14578 2027 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 DOCK3Q8IZD9 2030 aa2.95□□□□□ -1.94
YBX3-210ENST00000540975 ANKRD36A6QL64 1941 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 IGLV3-12A0A075B6K2 115 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 IRGMA1A4Y4 181 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 OR2T8A6NH00 312 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 ZNF705FA8MVS1 300 aaPredicted RBP2.94□□□□□ -1.94
YBX3-210ENST00000540975 C8orf87E5RJ46 101 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 SLC25A14O95258 325 aaPredicted RBP2.94□□□□□ -1.94
YBX3-210ENST00000540975 SFT2D2O95562 160 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 EPPINO95925 133 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 NCR2O95944 276 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 TRGC2P03986 189 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 HLA-DPB1P04440 258 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 SEC11BP0C7V7 166 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 ZNF705DP0CH99 300 aaPredicted RBP2.94□□□□□ -1.94
YBX3-210ENST00000540975 ZNF705BP0CI00 300 aaPredicted RBP2.94□□□□□ -1.94
YBX3-210ENST00000540975 P0DMU3 169 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 FAM231AP0DMU4 169 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 FAM231CP0DMU5 169 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 CXCL8P10145 99 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 RPS4Y1P22090 263 aaKnown RBP2.94□□□□□ -1.94
YBX3-210ENST00000540975 FKBP2P26885 142 aaKnown RBP2.94□□□□□ -1.94
YBX3-210ENST00000540975 OPRK1P41145 380 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 HINT1P49773 126 aaPredicted RBP2.94□□□□□ -1.94
YBX3-210ENST00000540975 YPEL3P61236 119 aaPredicted RBP2.94□□□□□ -1.94
YBX3-210ENST00000540975 HERVK_113P63121 156 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 HBG1P69891 147 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 HBG2P69892 147 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 HES1Q14469 280 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 DAZ4Q86SG3 579 aaKnown RBP2.94□□□□□ -1.94
YBX3-210ENST00000540975 ANKRD29Q8N6D5 301 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 ZFP62Q8NB50 900 aaPredicted RBP2.94□□□□□ -1.94
YBX3-210ENST00000540975 SLC25A44Q96H78 314 aaPredicted RBP2.94□□□□□ -1.94
YBX3-210ENST00000540975 SPANXDQ9BXN6 97 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 TMEM9BQ9NQ34 198 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 DAZ1Q9NQZ3 744 aaKnown RBP2.94□□□□□ -1.94
YBX3-210ENST00000540975 ABRACLQ9P1F3 81 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 NOP16Q9Y3C1 178 aaKnown RBP2.94□□□□□ -1.94
YBX3-210ENST00000540975 PDCD11Q14690 1871 aaKnown RBP2.94□□□□□ -1.94
YBX3-210ENST00000540975 NUP210LQ5VU65 1888 aa2.94□□□□□ -1.94
YBX3-210ENST00000540975 TRPM7Q96QT4 1865 aa2.93□□□□□ -1.94
YBX3-210ENST00000540975 TRBV24-1A0A075B6N3 115 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms