RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 C17orf50Q8WW18 174 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 FAM167A-AS1Q96KT0 104 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 SLC25A2Q9BXI2 301 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 NPFFR1Q9GZQ6 430 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 OTORQ9NRC9 128 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 MLXQ9UH92 298 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 RABAC1Q9UI14 185 aa6.48□□□□□ -1.37
CHD4-208ENST00000540960 C1orf196B1AJZ1 125 aa6.47□□□□□ -1.37
CHD4-208ENST00000540960 ZNF253O75346 499 aa6.47□□□□□ -1.37
CHD4-208ENST00000540960 OR2J3O76001 311 aa6.47□□□□□ -1.37
CHD4-208ENST00000540960 IGHV4-59P01825 116 aa6.47□□□□□ -1.37
CHD4-208ENST00000540960 IL4P05112 153 aa6.47□□□□□ -1.37
CHD4-208ENST00000540960 APELAP0DMC3 54 aa6.47□□□□□ -1.37
CHD4-208ENST00000540960 EGR2P11161 476 aaPredicted RBP6.47□□□□□ -1.37
CHD4-208ENST00000540960 GATA2P23769 480 aaPredicted RBP6.47□□□□□ -1.37
CHD4-208ENST00000540960 AKR1C3P42330 323 aa6.47□□□□□ -1.37
CHD4-208ENST00000540960 CSN1S1P47710 185 aa6.47□□□□□ -1.37
CHD4-208ENST00000540960 RPL15P61313 204 aaKnown RBP6.47□□□□□ -1.37
CHD4-208ENST00000540960 FLI1Q01543 452 aaPredicted RBP6.47□□□□□ -1.37
CHD4-208ENST00000540960 C15orf32Q32M92 178 aa6.47□□□□□ -1.37
CHD4-208ENST00000540960 ASPHD1Q5U4P2 390 aa6.47□□□□□ -1.37
CHD4-208ENST00000540960 SAMD13Q5VXD3 122 aa6.47□□□□□ -1.37
CHD4-208ENST00000540960 ZNF502Q8TBZ5 544 aa6.47□□□□□ -1.37
CHD4-208ENST00000540960 PIFOQ8TCI5 191 aa6.47□□□□□ -1.37
CHD4-208ENST00000540960 GRAMD2BQ96HH9 432 aa6.47□□□□□ -1.37
CHD4-208ENST00000540960 FAM103A1Q9BTL3 118 aaKnown RBP6.47□□□□□ -1.37
CHD4-208ENST00000540960 SLC25A39Q9BZJ4 359 aaPredicted RBP6.47□□□□□ -1.37
CHD4-208ENST00000540960 PRSS22Q9GZN4 317 aa6.47□□□□□ -1.37
CHD4-208ENST00000540960 AAMDCQ9H7C9 122 aa6.47□□□□□ -1.37
CHD4-208ENST00000540960 A0A1W2PS18 150 aa6.46□□□□□ -1.38
CHD4-208ENST00000540960 H3BRN7 92 aa6.46□□□□□ -1.38
CHD4-208ENST00000540960 UBE2G1P62253 170 aa6.46□□□□□ -1.38
CHD4-208ENST00000540960 RPL23P62829 140 aaKnown RBP6.46□□□□□ -1.38
CHD4-208ENST00000540960 SUMO1P63165 101 aaKnown RBP6.46□□□□□ -1.38
CHD4-208ENST00000540960 NDPQ00604 133 aa6.46□□□□□ -1.38
CHD4-208ENST00000540960 COX19Q49B96 90 aa6.46□□□□□ -1.38
CHD4-208ENST00000540960 C9orf152Q5JTZ5 239 aa6.46□□□□□ -1.38
CHD4-208ENST00000540960 SPATA31B1PQ5VZV4 182 aa6.46□□□□□ -1.38
CHD4-208ENST00000540960 TMEM88Q6PEY1 159 aa6.46□□□□□ -1.38
CHD4-208ENST00000540960 PATE2Q6UY27 113 aa6.46□□□□□ -1.38
CHD4-208ENST00000540960 ZNF491Q8N8L2 437 aa6.46□□□□□ -1.38
CHD4-208ENST00000540960 WFDC9Q8NEX5 89 aa6.46□□□□□ -1.38
CHD4-208ENST00000540960 FXYD5Q96DB9 178 aa6.46□□□□□ -1.38
CHD4-208ENST00000540960 FMC1Q96HJ9 113 aa6.46□□□□□ -1.38
CHD4-208ENST00000540960 METTL26Q96S19 204 aa6.46□□□□□ -1.38
CHD4-208ENST00000540960 C20orf24Q9BUV8 137 aa6.46□□□□□ -1.38
CHD4-208ENST00000540960 ELOVL1Q9BW60 279 aa6.46□□□□□ -1.38
CHD4-208ENST00000540960 VPREB3Q9UKI3 123 aa6.46□□□□□ -1.38
CHD4-208ENST00000540960 YTHDF2Q9Y5A9 579 aaKnown RBP6.46□□□□□ -1.38
CHD4-208ENST00000540960 DMRT1Q9Y5R6 373 aa6.46□□□□□ -1.38
CHD4-208ENST00000540960 HERC1Q15751 4861 aa6.45□□□□□ -1.38
CHD4-208ENST00000540960 TRBV24-1A0A075B6N3 115 aa6.45□□□□□ -1.38
CHD4-208ENST00000540960 TRBV6-1A0A0K0K1D8 114 aa6.45□□□□□ -1.38
CHD4-208ENST00000540960 ADARB2-AS1A8MUL3 147 aa6.45□□□□□ -1.38
CHD4-208ENST00000540960 IGHV3-48P01763 117 aa6.45□□□□□ -1.38
CHD4-208ENST00000540960 TRGV3P03979 118 aa6.45□□□□□ -1.38
CHD4-208ENST00000540960 CTSGP08311 255 aa6.45□□□□□ -1.38
CHD4-208ENST00000540960 OR10J4P0C629 311 aa6.45□□□□□ -1.38
CHD4-208ENST00000540960 ATF4P18848 351 aaPredicted RBP6.45□□□□□ -1.38
CHD4-208ENST00000540960 CD33P20138 364 aa6.45□□□□□ -1.38
CHD4-208ENST00000540960 RAB5AP20339 215 aa6.45□□□□□ -1.38
CHD4-208ENST00000540960 RPL35P42766 123 aaKnown RBP6.45□□□□□ -1.38
CHD4-208ENST00000540960 IER3P46695 156 aa6.45□□□□□ -1.38
CHD4-208ENST00000540960 GALR1P47211 349 aa6.45□□□□□ -1.38
CHD4-208ENST00000540960 ATP5G3P48201 142 aa6.45□□□□□ -1.38
CHD4-208ENST00000540960 EGFEM1PQ0D2K5 195 aa6.45□□□□□ -1.38
CHD4-208ENST00000540960 LINC01551Q86U37 167 aa6.45□□□□□ -1.38
CHD4-208ENST00000540960 CBLN2Q8IUK8 224 aa6.45□□□□□ -1.38
CHD4-208ENST00000540960 HSPB9Q9BQS6 159 aa6.45□□□□□ -1.38
CHD4-208ENST00000540960 ATG101Q9BSB4 218 aa6.45□□□□□ -1.38
CHD4-208ENST00000540960 MRPL36Q9P0J6 103 aaKnown RBP6.45□□□□□ -1.38
CHD4-208ENST00000540960 EPDR1Q9UM22 224 aa6.45□□□□□ -1.38
CHD4-208ENST00000540960 TMA7Q9Y2S6 64 aaKnown RBP6.45□□□□□ -1.38
CHD4-208ENST00000540960 IGHV3-21A0A0B4J1V1 117 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 SCO2A0A1W2PP80 73 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 ZNF98A6NK75 572 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 COLCA2A8K830 154 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 PPP5D1E7EU14 171 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 PEX7O00628 323 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 SLC25A5P05141 298 aaKnown RBP6.44□□□□□ -1.38
CHD4-208ENST00000540960 CLEC3BP05452 202 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 GP9P14770 177 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 NPPCP23582 126 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 CRYBB3P26998 211 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 TMEM183BQ1AE95 376 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 C19orf54Q5BKX5 351 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 ZNF343Q6P1L6 599 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 ZNF329Q86UD4 541 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 TMEM219Q86XT9 240 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 OR8I2Q8N0Y5 310 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 OR10G8Q8NGN5 311 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 ISOC2Q96AB3 205 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 SFRP2Q96HF1 295 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 SAV1Q9H4B6 383 aaPredicted RBP6.44□□□□□ -1.38
CHD4-208ENST00000540960 OSTCQ9NRP0 149 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 ZFP30Q9Y2G7 519 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 KLF12Q9Y4X4 402 aa6.44□□□□□ -1.38
CHD4-208ENST00000540960 TRBV19A0A075B6N1 114 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 TRAV5A0A0B4J249 113 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 PGPA6NDG6 321 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms