RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 TRAV6A0A075B6T7 132 aa7.49□□□□□ -1.21
CDCA3-208ENST00000540683 IGHV3OR16-12A0A075B7B8 117 aa7.49□□□□□ -1.21
CDCA3-208ENST00000540683 C7orf66A4D0T2 115 aa7.49□□□□□ -1.21
CDCA3-208ENST00000540683 PMS2P5A8MQ11 134 aa7.49□□□□□ -1.21
CDCA3-208ENST00000540683 AGPAT2O15120 278 aa7.49□□□□□ -1.21
CDCA3-208ENST00000540683 PRAF2O60831 178 aa7.49□□□□□ -1.21
CDCA3-208ENST00000540683 GATA2P23769 480 aaPredicted RBP7.49□□□□□ -1.21
CDCA3-208ENST00000540683 SLC38A11Q08AI6 406 aa7.49□□□□□ -1.21
CDCA3-208ENST00000540683 C10orf113Q5VZT2 155 aa7.49□□□□□ -1.21
CDCA3-208ENST00000540683 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.49□□□□□ -1.21
CDCA3-208ENST00000540683 Q6ZTC4 211 aa7.49□□□□□ -1.21
CDCA3-208ENST00000540683 LINC00305Q7Z4B0 112 aa7.49□□□□□ -1.21
CDCA3-208ENST00000540683 ZNF709Q8N972 641 aa7.49□□□□□ -1.21
CDCA3-208ENST00000540683 RNF141Q8WVD5 230 aa7.49□□□□□ -1.21
CDCA3-208ENST00000540683 C20orf144Q9BQM9 153 aa7.49□□□□□ -1.21
CDCA3-208ENST00000540683 NIPSNAP3BQ9BS92 247 aa7.49□□□□□ -1.21
CDCA3-208ENST00000540683 SCRT1Q9BWW7 348 aa7.49□□□□□ -1.21
CDCA3-208ENST00000540683 UQCC1Q9NVA1 299 aa7.49□□□□□ -1.21
CDCA3-208ENST00000540683 RCL1Q9Y2P8 373 aaKnown RBP7.49□□□□□ -1.21
CDCA3-208ENST00000540683 LSM5Q9Y4Y9 91 aaKnown RBP7.49□□□□□ -1.21
CDCA3-208ENST00000540683 SACSQ9NZJ4 4579 aa7.49□□□□□ -1.21
CDCA3-208ENST00000540683 LOC102723971A0A1B0GUV8 181 aa7.48□□□□□ -1.21
CDCA3-208ENST00000540683 LYRM9A8MSI8 78 aa7.48□□□□□ -1.21
CDCA3-208ENST00000540683 A8MTW9 85 aa7.48□□□□□ -1.21
CDCA3-208ENST00000540683 BOLA2-SMG1P6H3BVE0 249 aa7.48□□□□□ -1.21
CDCA3-208ENST00000540683 PLA2G10O15496 165 aa7.48□□□□□ -1.21
CDCA3-208ENST00000540683 CAMLGP49069 296 aa7.48□□□□□ -1.21
CDCA3-208ENST00000540683 SULT1A1P50225 295 aa7.48□□□□□ -1.21
CDCA3-208ENST00000540683 CNN1P51911 297 aaKnown RBP7.48□□□□□ -1.21
CDCA3-208ENST00000540683 DEFA1P59665 94 aa7.48□□□□□ -1.21
CDCA3-208ENST00000540683 DEFA3P59666 94 aa7.48□□□□□ -1.21
CDCA3-208ENST00000540683 RHOBP62745 196 aa7.48□□□□□ -1.21
CDCA3-208ENST00000540683 ASAH1Q13510 395 aa7.48□□□□□ -1.21
CDCA3-208ENST00000540683 OR10J6PQ8NGY7 276 aa7.48□□□□□ -1.21
CDCA3-208ENST00000540683 SLC25A31Q9H0C2 315 aa7.48□□□□□ -1.21
CDCA3-208ENST00000540683 DNAJC4Q9NNZ3 241 aa7.48□□□□□ -1.21
CDCA3-208ENST00000540683 LYRM2Q9NU23 88 aaPredicted RBP7.48□□□□□ -1.21
CDCA3-208ENST00000540683 APLNQ9ULZ1 77 aa7.48□□□□□ -1.21
CDCA3-208ENST00000540683 PET100P0DJ07 73 aa7.47□□□□□ -1.21
CDCA3-208ENST00000540683 EMP1P54849 157 aa7.47□□□□□ -1.21
CDCA3-208ENST00000540683 S100A10P60903 97 aa7.47□□□□□ -1.21
CDCA3-208ENST00000540683 DAD1P61803 113 aa7.47□□□□□ -1.21
CDCA3-208ENST00000540683 PSG3Q16557 428 aa7.47□□□□□ -1.21
CDCA3-208ENST00000540683 C12orf74Q32Q52 190 aa7.47□□□□□ -1.21
CDCA3-208ENST00000540683 GDF5OSQ5U4N7 250 aa7.47□□□□□ -1.21
CDCA3-208ENST00000540683 ZNF493Q6ZR52 646 aa7.47□□□□□ -1.21
CDCA3-208ENST00000540683 OR8A1Q8NGG7 326 aa7.47□□□□□ -1.21
CDCA3-208ENST00000540683 DKK2Q9UBU2 259 aa7.47□□□□□ -1.21
CDCA3-208ENST00000540683 DNAH1Q9P2D7 4330 aa7.46□□□□□ -1.21
CDCA3-208ENST00000540683 ZNF253O75346 499 aa7.46□□□□□ -1.22
CDCA3-208ENST00000540683 CXCL3P19876 107 aa7.46□□□□□ -1.22
CDCA3-208ENST00000540683 RPL29P47914 159 aaKnown RBP7.46□□□□□ -1.22
CDCA3-208ENST00000540683 FAM3BP58499 235 aaPredicted RBP7.46□□□□□ -1.22
CDCA3-208ENST00000540683 FXYD7P58549 80 aa7.46□□□□□ -1.22
CDCA3-208ENST00000540683 HIST1H1AQ02539 215 aaPredicted RBP7.46□□□□□ -1.22
CDCA3-208ENST00000540683 BAXQ07812 192 aa7.46□□□□□ -1.22
CDCA3-208ENST00000540683 FAM222AQ5U5X8 452 aa7.46□□□□□ -1.22
CDCA3-208ENST00000540683 NRARPQ7Z6K4 114 aa7.46□□□□□ -1.22
CDCA3-208ENST00000540683 CCDC28AQ8IWP9 274 aa7.46□□□□□ -1.22
CDCA3-208ENST00000540683 C15orf53Q8NAA6 179 aa7.46□□□□□ -1.22
CDCA3-208ENST00000540683 OR11H7Q8NGC8 314 aa7.46□□□□□ -1.22
CDCA3-208ENST00000540683 RPUSD4Q96CM3 377 aaKnown RBP7.46□□□□□ -1.22
CDCA3-208ENST00000540683 C16orf74Q96GX8 76 aa7.46□□□□□ -1.22
CDCA3-208ENST00000540683 UHRF2Q96PU4 802 aa7.46□□□□□ -1.22
CDCA3-208ENST00000540683 SLC35B3Q9H1N7 401 aa7.46□□□□□ -1.22
CDCA3-208ENST00000540683 PRELID1Q9Y255 219 aa7.46□□□□□ -1.22
CDCA3-208ENST00000540683 ALMS1Q8TCU4 4167 aa7.46□□□□□ -1.22
CDCA3-208ENST00000540683 E5RGE8 158 aa7.45□□□□□ -1.22
CDCA3-208ENST00000540683 F6UB75 175 aa7.45□□□□□ -1.22
CDCA3-208ENST00000540683 CDKN1BP46527 198 aa7.45□□□□□ -1.22
CDCA3-208ENST00000540683 TAS2R60P59551 318 aa7.45□□□□□ -1.22
CDCA3-208ENST00000540683 PDE6HQ13956 83 aa7.45□□□□□ -1.22
CDCA3-208ENST00000540683 VWC2Q2TAL6 325 aa7.45□□□□□ -1.22
CDCA3-208ENST00000540683 TMEM182Q6ZP80 229 aaPredicted RBP7.45□□□□□ -1.22
CDCA3-208ENST00000540683 LINC00336Q6ZUF6 198 aa7.45□□□□□ -1.22
CDCA3-208ENST00000540683 UBE2DNLQ8IWF7 75 aa7.45□□□□□ -1.22
CDCA3-208ENST00000540683 POM121L12Q8N7R1 296 aa7.45□□□□□ -1.22
CDCA3-208ENST00000540683 C20orf173Q96LM9 149 aa7.45□□□□□ -1.22
CDCA3-208ENST00000540683 LINC01587Q99440 93 aa7.45□□□□□ -1.22
CDCA3-208ENST00000540683 NMES1Q9C002 83 aa7.45□□□□□ -1.22
CDCA3-208ENST00000540683 ZNF331Q9NQX6 463 aaPredicted RBP7.45□□□□□ -1.22
CDCA3-208ENST00000540683 PTTG2Q9NZH5 202 aa7.45□□□□□ -1.22
CDCA3-208ENST00000540683 WDR83OSQ9Y284 106 aa7.45□□□□□ -1.22
CDCA3-208ENST00000540683 YTHDF2Q9Y5A9 579 aaKnown RBP7.45□□□□□ -1.22
CDCA3-208ENST00000540683 C17orf112F2Z3M2 114 aa7.44□□□□□ -1.22
CDCA3-208ENST00000540683 H7BYZ3 331 aa7.44□□□□□ -1.22
CDCA3-208ENST00000540683 CCSO14618 274 aa7.44□□□□□ -1.22
CDCA3-208ENST00000540683 UPK1BO75841 260 aa7.44□□□□□ -1.22
CDCA3-208ENST00000540683 CST7O76096 145 aa7.44□□□□□ -1.22
CDCA3-208ENST00000540683 SPINK13Q1W4C9 94 aa7.44□□□□□ -1.22
CDCA3-208ENST00000540683 RNF212Q495C1 297 aa7.44□□□□□ -1.22
CDCA3-208ENST00000540683 SOHLH1Q5JUK2 328 aa7.44□□□□□ -1.22
CDCA3-208ENST00000540683 AMTNQ6UX39 209 aa7.44□□□□□ -1.22
CDCA3-208ENST00000540683 RNF182Q8N6D2 247 aa7.44□□□□□ -1.22
CDCA3-208ENST00000540683 TMEM252Q8N6L7 170 aa7.44□□□□□ -1.22
CDCA3-208ENST00000540683 MRPL53Q96EL3 112 aaKnown RBP7.44□□□□□ -1.22
CDCA3-208ENST00000540683 ODF3Q96PU9 254 aa7.44□□□□□ -1.22
CDCA3-208ENST00000540683 MGST2Q99735 147 aa7.44□□□□□ -1.22
CDCA3-208ENST00000540683 SEC22CQ9BRL7 303 aa7.44□□□□□ -1.22
CDCA3-208ENST00000540683 AAMDCQ9H7C9 122 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms