RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 COX7A1P24310 79 aa16.06■□□□□ 0.16
TMEM260-203ENST00000539559 GPR183P32249 361 aa16.06■□□□□ 0.16
TMEM260-203ENST00000539559 TMEM155Q4W5P6 130 aa16.06■□□□□ 0.16
TMEM260-203ENST00000539559 C12orf54Q6X4T0 127 aa16.06■□□□□ 0.16
TMEM260-203ENST00000539559 C2orf91Q6ZV80 131 aa16.06■□□□□ 0.16
TMEM260-203ENST00000539559 C8orf49Q96NF6 230 aa16.06■□□□□ 0.16
TMEM260-203ENST00000539559 Q9UFV3 132 aa16.06■□□□□ 0.16
TMEM260-203ENST00000539559 LYNX1G3V0Z9 82 aa16.05■□□□□ 0.16
TMEM260-203ENST00000539559 LYNX1P0DP58 116 aa16.05■□□□□ 0.16
TMEM260-203ENST00000539559 LINC01545Q5VT33 79 aa16.05■□□□□ 0.16
TMEM260-203ENST00000539559 ZNF747Q9BV97 191 aa16.05■□□□□ 0.16
TMEM260-203ENST00000539559 RASL11BQ9BPW5 248 aa16.05■□□□□ 0.16
TMEM260-203ENST00000539559 IGKV1-17P01599 117 aa16.04■□□□□ 0.16
TMEM260-203ENST00000539559 FA2HQ7L5A8 372 aa16.04■□□□□ 0.16
TMEM260-203ENST00000539559 PPP1R27Q86WC6 154 aa16.04■□□□□ 0.16
TMEM260-203ENST00000539559 INSIG2Q9Y5U4 225 aa16.04■□□□□ 0.16
TMEM260-203ENST00000539559 TMEM213A2RRL7 107 aa16.04■□□□□ 0.16
TMEM260-203ENST00000539559 TNFRSF13BO14836 293 aaPredicted RBP16.04■□□□□ 0.16
TMEM260-203ENST00000539559 THBDP07204 575 aa16.04■□□□□ 0.16
TMEM260-203ENST00000539559 FAM71F2Q6NXP2 309 aa16.04■□□□□ 0.16
TMEM260-203ENST00000539559 VPS25Q9BRG1 176 aa16.04■□□□□ 0.16
TMEM260-203ENST00000539559 CRYGBP07316 175 aa16.03■□□□□ 0.16
TMEM260-203ENST00000539559 PLP1P60201 277 aa16.03■□□□□ 0.16
TMEM260-203ENST00000539559 ANKRD39Q53RE8 183 aa16.03■□□□□ 0.16
TMEM260-203ENST00000539559 KLF17Q5JT82 389 aaPredicted RBP16.03■□□□□ 0.16
TMEM260-203ENST00000539559 SAPCD1Q5SSQ6 148 aa16.03■□□□□ 0.16
TMEM260-203ENST00000539559 SVEP1Q4LDE5 3571 aa16.03■□□□□ 0.16
TMEM260-203ENST00000539559 HIST1H1AQ02539 215 aaPredicted RBP16.03■□□□□ 0.16
TMEM260-203ENST00000539559 PLGLAQ15195 96 aa16.03■□□□□ 0.16
TMEM260-203ENST00000539559 PVRIGQ6DKI7 326 aa16.03■□□□□ 0.16
TMEM260-203ENST00000539559 PIP4P2Q8N4L2 257 aa16.03■□□□□ 0.16
TMEM260-203ENST00000539559 PSG8Q9UQ74 426 aa16.03■□□□□ 0.16
TMEM260-203ENST00000539559 ARHGAP32A7KAX9 2087 aa16.03■□□□□ 0.16
TMEM260-203ENST00000539559 FAM231BA6NCW3 169 aa16.02■□□□□ 0.16
TMEM260-203ENST00000539559 UCNP55089 124 aa16.02■□□□□ 0.16
TMEM260-203ENST00000539559 NGBQ9NPG2 151 aa16.02■□□□□ 0.16
TMEM260-203ENST00000539559 A0A096LNJ9 63 aa16.02■□□□□ 0.16
TMEM260-203ENST00000539559 IGHV1-3A0A0C4DH29 117 aa16.02■□□□□ 0.16
TMEM260-203ENST00000539559 C16orf97H3BN30 126 aa16.02■□□□□ 0.16
TMEM260-203ENST00000539559 I3L2K1 104 aa16.02■□□□□ 0.16
TMEM260-203ENST00000539559 OCIAD2Q56VL3 154 aa16.02■□□□□ 0.16
TMEM260-203ENST00000539559 TRBV19A0A075B6N1 114 aa16.02■□□□□ 0.15
TMEM260-203ENST00000539559 D6R8Y8 96 aa16.02■□□□□ 0.15
TMEM260-203ENST00000539559 COX8AP10176 69 aa16.02■□□□□ 0.15
TMEM260-203ENST00000539559 RIGQ13278 110 aa16.02■□□□□ 0.15
TMEM260-203ENST00000539559 PRR30Q53SZ7 412 aaPredicted RBP16.02■□□□□ 0.15
TMEM260-203ENST00000539559 C16orf54Q6UWD8 224 aa16.02■□□□□ 0.15
TMEM260-203ENST00000539559 WFDC3Q8IUB2 231 aa16.02■□□□□ 0.15
TMEM260-203ENST00000539559 RELNP78509 3460 aa16.01■□□□□ 0.15
TMEM260-203ENST00000539559 S100A7P31151 101 aa16.01■□□□□ 0.15
TMEM260-203ENST00000539559 BPIFA4PQ86YQ2 179 aa16.01■□□□□ 0.15
TMEM260-203ENST00000539559 AMN1Q8IY45 258 aa16.01■□□□□ 0.15
TMEM260-203ENST00000539559 C7orf71A4D174 169 aa16.01■□□□□ 0.15
TMEM260-203ENST00000539559 SIGLEC15Q6ZMC9 328 aa16.01■□□□□ 0.15
TMEM260-203ENST00000539559 MS4A6AQ9H2W1 248 aa16.01■□□□□ 0.15
TMEM260-203ENST00000539559 DYNLRB1Q9NP97 96 aa16.01■□□□□ 0.15
TMEM260-203ENST00000539559 CD5LO43866 347 aa16■□□□□ 0.15
TMEM260-203ENST00000539559 HOXB4P17483 251 aaPredicted RBP16■□□□□ 0.15
TMEM260-203ENST00000539559 RBPJQ06330 500 aa16■□□□□ 0.15
TMEM260-203ENST00000539559 RAXQ9Y2V3 346 aa16■□□□□ 0.15
TMEM260-203ENST00000539559 HILPDAQ9Y5L2 63 aa16■□□□□ 0.15
TMEM260-203ENST00000539559 PTPRQQ9UMZ3 2332 aa16■□□□□ 0.15
TMEM260-203ENST00000539559 SMKR1H3BMG3 65 aa16■□□□□ 0.15
TMEM260-203ENST00000539559 FCGR2BP31994 310 aaPredicted RBP16■□□□□ 0.15
TMEM260-203ENST00000539559 OR10AG1Q8NH19 301 aa16■□□□□ 0.15
TMEM260-203ENST00000539559 RNASE6Q93091 150 aaKnown RBP16■□□□□ 0.15
TMEM260-203ENST00000539559 GAGE12BA1L429 117 aa15.99■□□□□ 0.15
TMEM260-203ENST00000539559 CNIH1O95406 144 aa15.99■□□□□ 0.15
TMEM260-203ENST00000539559 IL4P05112 153 aa15.99■□□□□ 0.15
TMEM260-203ENST00000539559 COTL1Q14019 142 aa15.99■□□□□ 0.15
TMEM260-203ENST00000539559 C8orf31Q8N9H6 132 aa15.99■□□□□ 0.15
TMEM260-203ENST00000539559 TMEM14CQ9P0S9 112 aa15.99■□□□□ 0.15
TMEM260-203ENST00000539559 LYZL1Q6UWQ5 148 aa15.99■□□□□ 0.15
TMEM260-203ENST00000539559 SIGLEC8Q9NYZ4 499 aa15.99■□□□□ 0.15
TMEM260-203ENST00000539559 PSG3Q16557 428 aa15.98■□□□□ 0.15
TMEM260-203ENST00000539559 CSN1S1P47710 185 aa15.98■□□□□ 0.15
TMEM260-203ENST00000539559 BUB1B-PAK6H3BSN5 160 aa15.97■□□□□ 0.15
TMEM260-203ENST00000539559 K7EIM0 57 aa15.97■□□□□ 0.15
TMEM260-203ENST00000539559 CACNG7P62955 275 aa15.97■□□□□ 0.15
TMEM260-203ENST00000539559 TMEM97Q5BJF2 176 aa15.97■□□□□ 0.15
TMEM260-203ENST00000539559 PRSS57Q6UWY2 283 aa15.97■□□□□ 0.15
TMEM260-203ENST00000539559 SHANK2-AS3Q9BTD1 123 aa15.97■□□□□ 0.15
TMEM260-203ENST00000539559 JKAMPQ9P055 326 aa15.97■□□□□ 0.15
TMEM260-203ENST00000539559 RABAC1Q9UI14 185 aa15.97■□□□□ 0.15
TMEM260-203ENST00000539559 SAP30O75446 220 aa15.97■□□□□ 0.15
TMEM260-203ENST00000539559 IGLV1-47P01700 117 aa15.97■□□□□ 0.15
TMEM260-203ENST00000539559 FGF6P10767 208 aa15.96■□□□□ 0.15
TMEM260-203ENST00000539559 TMEM75Q8N9X5 138 aa15.96■□□□□ 0.15
TMEM260-203ENST00000539559 IGFL4Q6B9Z1 124 aa15.96■□□□□ 0.15
TMEM260-203ENST00000539559 ZNF491Q8N8L2 437 aa15.96■□□□□ 0.15
TMEM260-203ENST00000539559 RPEQ96AT9 228 aa15.96■□□□□ 0.15
TMEM260-203ENST00000539559 H3BRN7 92 aa15.95■□□□□ 0.14
TMEM260-203ENST00000539559 JMJD8Q96S16 334 aa15.95■□□□□ 0.14
TMEM260-203ENST00000539559 IGKV2-40A0A087WW87 121 aaPredicted RBP15.95■□□□□ 0.14
TMEM260-203ENST00000539559 IGKV2D-40P01614 121 aaPredicted RBP15.95■□□□□ 0.14
TMEM260-203ENST00000539559 RAB37Q96AX2 223 aa15.95■□□□□ 0.14
TMEM260-203ENST00000539559 RNF125Q96EQ8 232 aa15.95■□□□□ 0.14
TMEM260-203ENST00000539559 ZNF414Q96IQ9 312 aa15.95■□□□□ 0.14
TMEM260-203ENST00000539559 PRELID3AQ96N28 172 aa15.95■□□□□ 0.14
TMEM260-203ENST00000539559 THYN1Q9P016 225 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms