RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 SMPXQ9UHP9 88 aa6.96□□□□□ -1.3
RTN4IP1-204ENST00000539449 VAX2Q9UIW0 290 aa6.96□□□□□ -1.3
RTN4IP1-204ENST00000539449 TSSC4Q9Y5U2 329 aaPredicted RBP6.96□□□□□ -1.3
RTN4IP1-204ENST00000539449 IGHV7-4-1A0A0J9YVY3 117 aa6.95□□□□□ -1.3
RTN4IP1-204ENST00000539449 TMEM218A2RU14 115 aa6.95□□□□□ -1.3
RTN4IP1-204ENST00000539449 GGTLC3B5MD39 225 aa6.95□□□□□ -1.3
RTN4IP1-204ENST00000539449 K7EMT4 169 aa6.95□□□□□ -1.3
RTN4IP1-204ENST00000539449 IFNA1P01562 189 aa6.95□□□□□ -1.3
RTN4IP1-204ENST00000539449 HIST1H1EP10412 219 aaKnown RBP6.95□□□□□ -1.3
RTN4IP1-204ENST00000539449 HLA-DMBP28068 263 aa6.95□□□□□ -1.3
RTN4IP1-204ENST00000539449 MYCNOSP40205 109 aa6.95□□□□□ -1.3
RTN4IP1-204ENST00000539449 PPT1P50897 306 aa6.95□□□□□ -1.3
RTN4IP1-204ENST00000539449 NSUN5P1Q3KNT7 163 aa6.95□□□□□ -1.3
RTN4IP1-204ENST00000539449 IGFL4Q6B9Z1 124 aa6.95□□□□□ -1.3
RTN4IP1-204ENST00000539449 UQCC3Q6UW78 93 aa6.95□□□□□ -1.3
RTN4IP1-204ENST00000539449 BPIFA4PQ86YQ2 179 aa6.95□□□□□ -1.3
RTN4IP1-204ENST00000539449 CCDC28AQ8IWP9 274 aa6.95□□□□□ -1.3
RTN4IP1-204ENST00000539449 OR8I2Q8N0Y5 310 aa6.95□□□□□ -1.3
RTN4IP1-204ENST00000539449 WFDC12Q8WWY7 111 aa6.95□□□□□ -1.3
RTN4IP1-204ENST00000539449 OR4F4Q96R69 305 aa6.95□□□□□ -1.3
RTN4IP1-204ENST00000539449 ELOVL1Q9BW60 279 aa6.95□□□□□ -1.3
RTN4IP1-204ENST00000539449 MANBALQ9NQG1 85 aa6.95□□□□□ -1.3
RTN4IP1-204ENST00000539449 TRBV19A0A075B6N1 114 aa6.94□□□□□ -1.3
RTN4IP1-204ENST00000539449 C2orf70A6NJV1 201 aa6.94□□□□□ -1.3
RTN4IP1-204ENST00000539449 C11orf94C9JXX5 98 aa6.94□□□□□ -1.3
RTN4IP1-204ENST00000539449 CCL24O00175 119 aa6.94□□□□□ -1.3
RTN4IP1-204ENST00000539449 LGALS9O00182 355 aa6.94□□□□□ -1.3
RTN4IP1-204ENST00000539449 CHEK1O14757 476 aa6.94□□□□□ -1.3
RTN4IP1-204ENST00000539449 RANP62826 216 aaKnown RBP6.94□□□□□ -1.3
RTN4IP1-204ENST00000539449 SUMO1P63165 101 aaKnown RBP6.94□□□□□ -1.3
RTN4IP1-204ENST00000539449 GNG5P63218 68 aa6.94□□□□□ -1.3
RTN4IP1-204ENST00000539449 MEF2BQ02080 365 aaPredicted RBP6.94□□□□□ -1.3
RTN4IP1-204ENST00000539449 FAM90A2PQ658T7 463 aa6.94□□□□□ -1.3
RTN4IP1-204ENST00000539449 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.94□□□□□ -1.3
RTN4IP1-204ENST00000539449 EXOC3-AS1Q8N2X6 119 aa6.94□□□□□ -1.3
RTN4IP1-204ENST00000539449 CYB561D1Q8N8Q1 229 aa6.94□□□□□ -1.3
RTN4IP1-204ENST00000539449 STXBP6Q8NFX7 210 aa6.94□□□□□ -1.3
RTN4IP1-204ENST00000539449 RHPN1-AS1Q9BWJ2 59 aa6.94□□□□□ -1.3
RTN4IP1-204ENST00000539449 HYDINQ4G0P3 5121 aa6.94□□□□□ -1.3
RTN4IP1-204ENST00000539449 DYNC2H1Q8NCM8 4307 aaKnown RBP6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 A0A1B0GUS0 222 aa6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 SCO2A0A1W2PP80 73 aa6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 A0A1W2PRE2 83 aa6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 PGPA6NDG6 321 aa6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 ZNF785A8K8V0 405 aa6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 A8MWP6 167 aa6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 CSN3P07498 182 aa6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 SFTA3P0C7M3 94 aa6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 RPL7P18124 248 aaKnown RBP6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 ZP3P21754 424 aa6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 CEBPGP53567 150 aa6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 FHL3Q13643 280 aa6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 C1orf194Q5T5A4 169 aa6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 SIGLEC15Q6ZMC9 328 aa6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 OR4F17Q8NGA8 305 aa6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 NARS2Q96I59 477 aaKnown RBP6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 DERL1Q9BUN8 251 aa6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 SLC35B3Q9H1N7 401 aa6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 Q9H3A6 140 aa6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 DAZ1Q9NQZ3 744 aaKnown RBP6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 MLXQ9UH92 298 aa6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 UFC1Q9Y3C8 167 aa6.93□□□□□ -1.3
RTN4IP1-204ENST00000539449 A0A087X0K7 114 aa6.92□□□□□ -1.3
RTN4IP1-204ENST00000539449 TRAV8-2A0A0B4J237 113 aa6.92□□□□□ -1.3
RTN4IP1-204ENST00000539449 FOLR2P14207 255 aa6.92□□□□□ -1.3
RTN4IP1-204ENST00000539449 ATF4P18848 351 aaPredicted RBP6.92□□□□□ -1.3
RTN4IP1-204ENST00000539449 CBLN1P23435 193 aa6.92□□□□□ -1.3
RTN4IP1-204ENST00000539449 GUCA2BQ16661 112 aa6.92□□□□□ -1.3
RTN4IP1-204ENST00000539449 C10orf91Q5T1B1 145 aa6.92□□□□□ -1.3
RTN4IP1-204ENST00000539449 TCF24Q7RTU0 167 aa6.92□□□□□ -1.3
RTN4IP1-204ENST00000539449 NDUFA11Q86Y39 141 aa6.92□□□□□ -1.3
RTN4IP1-204ENST00000539449 ARL2-SNX15V9GYD0 113 aa6.92□□□□□ -1.3
RTN4IP1-204ENST00000539449 IGKV3-7A0A075B6H7 116 aa6.91□□□□□ -1.3
RTN4IP1-204ENST00000539449 F8W036 122 aa6.91□□□□□ -1.3
RTN4IP1-204ENST00000539449 M0R3E3 92 aa6.91□□□□□ -1.3
RTN4IP1-204ENST00000539449 SLC25A5P05141 298 aaKnown RBP6.91□□□□□ -1.3
RTN4IP1-204ENST00000539449 S100A7AQ86SG5 101 aa6.91□□□□□ -1.3
RTN4IP1-204ENST00000539449 OR9G4Q8NGQ1 327 aa6.91□□□□□ -1.3
RTN4IP1-204ENST00000539449 RPUSD4Q96CM3 377 aaKnown RBP6.91□□□□□ -1.3
RTN4IP1-204ENST00000539449 C20orf173Q96LM9 149 aa6.91□□□□□ -1.3
RTN4IP1-204ENST00000539449 LINC00479Q96M42 142 aa6.91□□□□□ -1.3
RTN4IP1-204ENST00000539449 SMDT1Q9H4I9 107 aa6.91□□□□□ -1.3
RTN4IP1-204ENST00000539449 OTORQ9NRC9 128 aa6.91□□□□□ -1.3
RTN4IP1-204ENST00000539449 RPH3ALQ9UNE2 315 aa6.91□□□□□ -1.3
RTN4IP1-204ENST00000539449 COL7A1Q02388 2944 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 TRAV34A0A0B4J273 112 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 A0A1W2PS18 150 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 ZNF705FA8MVS1 300 aaPredicted RBP6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 KRBOX1C9JBD0 128 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 PRAC2D3DTV9 90 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 F6UZH7 168 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 SOCS3O14543 225 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 OVOL1O14753 267 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 S100A1P23297 94 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 S100A7P31151 101 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 TAGLN2P37802 199 aaKnown RBP6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 GALR1P47211 349 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 DEFB1P60022 68 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 ZNF674Q2M3X9 581 aa6.9□□□□□ -1.3
RTN4IP1-204ENST00000539449 SOHLH1Q5JUK2 328 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms