RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 MEOX2P50222 304 aa11.51□□□□□ -0.57
RPAIN-206ENST00000539417 FFAR4Q5NUL3 377 aa11.51□□□□□ -0.57
RPAIN-206ENST00000539417 FAM78BQ5VT40 261 aa11.51□□□□□ -0.57
RPAIN-206ENST00000539417 Q6ZWC4 215 aa11.51□□□□□ -0.57
RPAIN-206ENST00000539417 ZNF709Q8N972 641 aa11.51□□□□□ -0.57
RPAIN-206ENST00000539417 OR11H4Q8NGC9 324 aa11.51□□□□□ -0.57
RPAIN-206ENST00000539417 SCGB1C1Q8TD33 95 aa11.51□□□□□ -0.57
RPAIN-206ENST00000539417 RNF183Q96D59 192 aa11.51□□□□□ -0.57
RPAIN-206ENST00000539417 FAM167A-AS1Q96KT0 104 aa11.51□□□□□ -0.57
RPAIN-206ENST00000539417 SLC25A2Q9BXI2 301 aa11.51□□□□□ -0.57
RPAIN-206ENST00000539417 PARD6GQ9BYG4 376 aaPredicted RBP11.51□□□□□ -0.57
RPAIN-206ENST00000539417 ZNF586Q9NXT0 402 aa11.51□□□□□ -0.57
RPAIN-206ENST00000539417 UBE2CO00762 179 aa11.51□□□□□ -0.57
RPAIN-206ENST00000539417 HLA-DRB4P13762 266 aa11.51□□□□□ -0.57
RPAIN-206ENST00000539417 BPIFA4PQ86YQ2 179 aa11.51□□□□□ -0.57
RPAIN-206ENST00000539417 SAT2Q96F10 170 aaPredicted RBP11.51□□□□□ -0.57
RPAIN-206ENST00000539417 WWC2-AS2Q96NR7 200 aa11.51□□□□□ -0.57
RPAIN-206ENST00000539417 CLEC5AQ9NY25 188 aa11.51□□□□□ -0.57
RPAIN-206ENST00000539417 HLA-DRB4X5D2U9 266 aa11.51□□□□□ -0.57
RPAIN-206ENST00000539417 STARD9Q9P2P6 4700 aa11.5□□□□□ -0.57
RPAIN-206ENST00000539417 C17orf112F2Z3M2 114 aa11.5□□□□□ -0.57
RPAIN-206ENST00000539417 RGS13O14921 159 aa11.5□□□□□ -0.57
RPAIN-206ENST00000539417 SPRY2O43597 315 aa11.5□□□□□ -0.57
RPAIN-206ENST00000539417 FXYD7P58549 80 aa11.5□□□□□ -0.57
RPAIN-206ENST00000539417 RPL7L1Q6DKI1 246 aaKnown RBP11.5□□□□□ -0.57
RPAIN-206ENST00000539417 S100A7AQ86SG5 101 aa11.5□□□□□ -0.57
RPAIN-206ENST00000539417 HSD17B11Q8NBQ5 300 aa11.5□□□□□ -0.57
RPAIN-206ENST00000539417 ZNF331Q9NQX6 463 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-206ENST00000539417 CSMD3Q7Z407 3707 aa11.49□□□□□ -0.57
RPAIN-206ENST00000539417 A0A0J9YX75 114 aa11.49□□□□□ -0.57
RPAIN-206ENST00000539417 ZNF705FA8MVS1 300 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-206ENST00000539417 ARPC5O15511 151 aa11.49□□□□□ -0.57
RPAIN-206ENST00000539417 FOXI2Q6ZQN5 318 aa11.49□□□□□ -0.57
RPAIN-206ENST00000539417 INO80EQ8NBZ0 244 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-206ENST00000539417 ZNF503Q96F45 646 aa11.49□□□□□ -0.57
RPAIN-206ENST00000539417 SH3BGRL3Q9H299 93 aa11.49□□□□□ -0.57
RPAIN-206ENST00000539417 HRH4Q9H3N8 390 aa11.49□□□□□ -0.57
RPAIN-206ENST00000539417 RPRMQ9NS64 109 aa11.49□□□□□ -0.57
RPAIN-206ENST00000539417 PRAC2D3DTV9 90 aa11.48□□□□□ -0.57
RPAIN-206ENST00000539417 ATP6V0CP27449 155 aa11.48□□□□□ -0.57
RPAIN-206ENST00000539417 RAB2AP61019 212 aa11.48□□□□□ -0.57
RPAIN-206ENST00000539417 ZNF738Q8NE65 137 aa11.48□□□□□ -0.57
RPAIN-206ENST00000539417 OR4B1Q8NGF8 309 aa11.48□□□□□ -0.57
RPAIN-206ENST00000539417 SLC35B3Q9H1N7 401 aa11.48□□□□□ -0.57
RPAIN-206ENST00000539417 KCNIP2Q9NS61 270 aa11.48□□□□□ -0.57
RPAIN-206ENST00000539417 FUT9Q9Y231 359 aa11.48□□□□□ -0.57
RPAIN-206ENST00000539417 NDUFB4O95168 129 aa11.47□□□□□ -0.57
RPAIN-206ENST00000539417 SPP1P10451 314 aa11.47□□□□□ -0.57
RPAIN-206ENST00000539417 IFITM2Q01629 132 aa11.47□□□□□ -0.57
RPAIN-206ENST00000539417 PSG3Q16557 428 aa11.47□□□□□ -0.57
RPAIN-206ENST00000539417 NDUFA5Q16718 116 aa11.47□□□□□ -0.57
RPAIN-206ENST00000539417 SAMD13Q5VXD3 122 aa11.47□□□□□ -0.57
RPAIN-206ENST00000539417 LCN15Q6UWW0 184 aa11.47□□□□□ -0.57
RPAIN-206ENST00000539417 CSNK1G2-AS1Q8NCQ2 148 aa11.47□□□□□ -0.57
RPAIN-206ENST00000539417 LRRC20Q8TCA0 184 aa11.47□□□□□ -0.57
RPAIN-206ENST00000539417 CYTL1Q9NRR1 136 aa11.47□□□□□ -0.57
RPAIN-206ENST00000539417 TMEM14CQ9P0S9 112 aa11.47□□□□□ -0.57
RPAIN-206ENST00000539417 XCL2Q9UBD3 114 aa11.47□□□□□ -0.57
RPAIN-206ENST00000539417 TP53TG1Q9Y2A0 90 aa11.47□□□□□ -0.57
RPAIN-206ENST00000539417 TRBV19A0A075B6N1 114 aa11.46□□□□□ -0.57
RPAIN-206ENST00000539417 ZNF266Q14584 549 aa11.46□□□□□ -0.57
RPAIN-206ENST00000539417 MORN3Q6PF18 240 aaPredicted RBP11.46□□□□□ -0.57
RPAIN-206ENST00000539417 AMTNQ6UX39 209 aa11.46□□□□□ -0.57
RPAIN-206ENST00000539417 RNF24Q9Y225 148 aa11.46□□□□□ -0.57
RPAIN-206ENST00000539417 TIMM9Q9Y5J7 89 aa11.46□□□□□ -0.57
RPAIN-206ENST00000539417 A8MTW9 85 aa11.45□□□□□ -0.58
RPAIN-206ENST00000539417 OR10J4P0C629 311 aa11.45□□□□□ -0.58
RPAIN-206ENST00000539417 HIST1H1EP10412 219 aaKnown RBP11.45□□□□□ -0.58
RPAIN-206ENST00000539417 CXCL2P19875 107 aa11.45□□□□□ -0.58
RPAIN-206ENST00000539417 CNN1P51911 297 aaKnown RBP11.45□□□□□ -0.58
RPAIN-206ENST00000539417 EBLN2Q6P2I7 272 aa11.45□□□□□ -0.58
RPAIN-206ENST00000539417 BLNKQ8WV28 456 aa11.45□□□□□ -0.58
RPAIN-206ENST00000539417 FXYD5Q96DB9 178 aa11.45□□□□□ -0.58
RPAIN-206ENST00000539417 MRPL32Q9BYC8 188 aaKnown RBP11.45□□□□□ -0.58
RPAIN-206ENST00000539417 MFFQ9GZY8 342 aa11.45□□□□□ -0.58
RPAIN-206ENST00000539417 A0A0J9YWU9 116 aa11.44□□□□□ -0.58
RPAIN-206ENST00000539417 HMGB3O15347 200 aaKnown RBP11.44□□□□□ -0.58
RPAIN-206ENST00000539417 FAM122CQ6P4D5 195 aa11.44□□□□□ -0.58
RPAIN-206ENST00000539417 OR11H2Q8NH07 326 aa11.44□□□□□ -0.58
RPAIN-206ENST00000539417 RPUSD4Q96CM3 377 aaKnown RBP11.44□□□□□ -0.58
RPAIN-206ENST00000539417 SLC50A1Q9BRV3 221 aa11.44□□□□□ -0.58
RPAIN-206ENST00000539417 OR51M1Q9H341 326 aa11.44□□□□□ -0.58
RPAIN-206ENST00000539417 M0R3E3 92 aa11.44□□□□□ -0.58
RPAIN-206ENST00000539417 DEFB4AO15263 64 aa11.44□□□□□ -0.58
RPAIN-206ENST00000539417 ATP6V1G1O75348 118 aa11.44□□□□□ -0.58
RPAIN-206ENST00000539417 M6PRP20645 277 aa11.44□□□□□ -0.58
RPAIN-206ENST00000539417 EXOC3-AS1Q8N2X6 119 aa11.44□□□□□ -0.58
RPAIN-206ENST00000539417 OR8A1Q8NGG7 326 aa11.44□□□□□ -0.58
RPAIN-206ENST00000539417 OR2G3Q8NGZ4 309 aa11.44□□□□□ -0.58
RPAIN-206ENST00000539417 CLUHP3Q96NS8 147 aa11.44□□□□□ -0.58
RPAIN-206ENST00000539417 RARRES2Q99969 163 aa11.44□□□□□ -0.58
RPAIN-206ENST00000539417 PAXXQ9BUH6 204 aa11.44□□□□□ -0.58
RPAIN-206ENST00000539417 RHOBP62745 196 aa11.43□□□□□ -0.58
RPAIN-206ENST00000539417 PSG9Q00887 426 aa11.43□□□□□ -0.58
RPAIN-206ENST00000539417 HIST1H1AQ02539 215 aaPredicted RBP11.43□□□□□ -0.58
RPAIN-206ENST00000539417 GUK1Q16774 197 aa11.43□□□□□ -0.58
RPAIN-206ENST00000539417 ACOT6Q3I5F7 207 aaPredicted RBP11.43□□□□□ -0.58
RPAIN-206ENST00000539417 SSX7Q7RTT5 188 aa11.43□□□□□ -0.58
RPAIN-206ENST00000539417 C9orf62Q8N4C0 152 aa11.43□□□□□ -0.58
RPAIN-206ENST00000539417 RPP25LQ8N5L8 163 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms