RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 HYLS1Q96M11 299 aa0.64□□□□□ -2.31
CCDC7-209ENST00000539197 LINC00052Q96N35 136 aa0.64□□□□□ -2.31
CCDC7-209ENST00000539197 MRPL57Q9BQC6 102 aaKnown RBP0.64□□□□□ -2.31
CCDC7-209ENST00000539197 ORMDL1Q9P0S3 153 aa0.64□□□□□ -2.31
CCDC7-209ENST00000539197 TRAV5A0A0B4J249 113 aa0.63□□□□□ -2.31
CCDC7-209ENST00000539197 IGHV1-58A0A0C4DH39 117 aa0.63□□□□□ -2.31
CCDC7-209ENST00000539197 A0A1W2PRE2 83 aa0.63□□□□□ -2.31
CCDC7-209ENST00000539197 C5orf67F2Z3F1 127 aa0.63□□□□□ -2.31
CCDC7-209ENST00000539197 H7BYZ3 331 aa0.63□□□□□ -2.31
CCDC7-209ENST00000539197 PGRMC1O00264 195 aaKnown RBP0.63□□□□□ -2.31
CCDC7-209ENST00000539197 CST7O76096 145 aa0.63□□□□□ -2.31
CCDC7-209ENST00000539197 IFNA4P05014 189 aa0.63□□□□□ -2.31
CCDC7-209ENST00000539197 CXCL8P10145 99 aa0.63□□□□□ -2.31
CCDC7-209ENST00000539197 TMEM78Q5T7P6 136 aa0.63□□□□□ -2.31
CCDC7-209ENST00000539197 ANGPTL5Q86XS5 388 aa0.63□□□□□ -2.31
CCDC7-209ENST00000539197 BORCS8Q96FH0 119 aa0.63□□□□□ -2.31
CCDC7-209ENST00000539197 LINC00526Q96FQ7 95 aa0.63□□□□□ -2.31
CCDC7-209ENST00000539197 TAF9BQ9HBM6 251 aa0.63□□□□□ -2.31
CCDC7-209ENST00000539197 NAT8BQ9UHF3 227 aa0.63□□□□□ -2.31
CCDC7-209ENST00000539197 V9GYQ6 96 aa0.63□□□□□ -2.31
CCDC7-209ENST00000539197 MED12LQ86YW9 2145 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 ADGRB2O60241 1585 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 ANAPC1Q9H1A4 1944 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 KIF1BO60333 1816 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 ROCK1Q13464 1354 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 A0A087WSZ3 146 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 TRAV27A0A087WT01 109 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 C9orf170A2RU37 121 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 F8W1H4 67 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 H3BQV1 296 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 NUPR1O60356 82 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 MT-ND6P03923 174 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 ARPINQ7Z6K5 226 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 CROCCP2Q86T23 111 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 GKN2Q86XP6 184 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 PRR15Q8IV56 129 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 LRRC18Q8N456 261 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 FAM216BQ8N7L0 139 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 RMND5BQ96G75 393 aaPredicted RBP0.62□□□□□ -2.31
CCDC7-209ENST00000539197 SELENOSQ9BQE4 189 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 OR2H1Q9GZK4 316 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 LRTM1Q9HBL6 345 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 TMEM14CQ9P0S9 112 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 SMPXQ9UHP9 88 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 NUBP2Q9Y5Y2 271 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 CD109Q6YHK3 1445 aa0.62□□□□□ -2.31
CCDC7-209ENST00000539197 TRDV1A0A1B0GX56 115 aa0.61□□□□□ -2.31
CCDC7-209ENST00000539197 hDV103S1A0JD37 113 aa0.61□□□□□ -2.31
CCDC7-209ENST00000539197 GABARAPH6UMI1 98 aa0.61□□□□□ -2.31
CCDC7-209ENST00000539197 FABP2P12104 132 aa0.61□□□□□ -2.31
CCDC7-209ENST00000539197 S100A11P31949 105 aa0.61□□□□□ -2.31
CCDC7-209ENST00000539197 RPL35P42766 123 aaKnown RBP0.61□□□□□ -2.31
CCDC7-209ENST00000539197 PSG9Q00887 426 aa0.61□□□□□ -2.31
CCDC7-209ENST00000539197 HRCT1Q6UXD1 115 aa0.61□□□□□ -2.31
CCDC7-209ENST00000539197 LINC00322Q6ZN03 302 aaPredicted RBP0.61□□□□□ -2.31
CCDC7-209ENST00000539197 TEN1Q86WV5 123 aa0.61□□□□□ -2.31
CCDC7-209ENST00000539197 OR5AS1Q8N127 324 aa0.61□□□□□ -2.31
CCDC7-209ENST00000539197 GRPEL2Q8TAA5 225 aa0.61□□□□□ -2.31
CCDC7-209ENST00000539197 CCDC32Q9BV29 185 aa0.61□□□□□ -2.31
CCDC7-209ENST00000539197 NIT2Q9NQR4 276 aa0.61□□□□□ -2.31
CCDC7-209ENST00000539197 LAMTOR3Q9UHA4 124 aa0.61□□□□□ -2.31
CCDC7-209ENST00000539197 ATPIF1Q9UII2 106 aa0.61□□□□□ -2.31
CCDC7-209ENST00000539197 TNS3Q68CZ2 1445 aa0.61□□□□□ -2.31
CCDC7-209ENST00000539197 SCN8AQ9UQD0 1980 aa0.61□□□□□ -2.31
CCDC7-209ENST00000539197 SBF1O95248 1867 aa0.61□□□□□ -2.31
CCDC7-209ENST00000539197 RFX7Q2KHR2 1363 aa0.6□□□□□ -2.31
CCDC7-209ENST00000539197 TAF1LQ8IZX4 1826 aa0.6□□□□□ -2.31
CCDC7-209ENST00000539197 A0A1B0GV72 72 aa0.6□□□□□ -2.31
CCDC7-209ENST00000539197 H3BRM9 83 aa0.6□□□□□ -2.31
CCDC7-209ENST00000539197 KPNA4O00629 521 aaPredicted RBP0.6□□□□□ -2.31
CCDC7-209ENST00000539197 LYRM1O43325 122 aa0.6□□□□□ -2.31
CCDC7-209ENST00000539197 IFNA21P01568 189 aa0.6□□□□□ -2.31
CCDC7-209ENST00000539197 COX7CP15954 63 aa0.6□□□□□ -2.31
CCDC7-209ENST00000539197 ISOC1Q96CN7 298 aa0.6□□□□□ -2.31
CCDC7-209ENST00000539197 EFCAB11Q9BUY7 163 aa0.6□□□□□ -2.31
CCDC7-209ENST00000539197 CENPHQ9H3R5 247 aa0.6□□□□□ -2.31
CCDC7-209ENST00000539197 TMEM138Q9NPI0 162 aa0.6□□□□□ -2.31
CCDC7-209ENST00000539197 TECPR2O15040 1411 aa0.6□□□□□ -2.31
CCDC7-209ENST00000539197 YTHDC2Q9H6S0 1430 aaKnown RBP0.6□□□□□ -2.31
CCDC7-209ENST00000539197 SYNMO15061 1565 aa0.6□□□□□ -2.31
CCDC7-209ENST00000539197 LAMB4A4D0S4 1761 aa0.6□□□□□ -2.31
CCDC7-209ENST00000539197 KDM6AO15550 1401 aaPredicted RBP0.59□□□□□ -2.31
CCDC7-209ENST00000539197 NCR3O14931 201 aa0.59□□□□□ -2.31
CCDC7-209ENST00000539197 BCL2P10415 239 aa0.59□□□□□ -2.31
CCDC7-209ENST00000539197 RPL7P18124 248 aaKnown RBP0.59□□□□□ -2.31
CCDC7-209ENST00000539197 SDC2P34741 201 aa0.59□□□□□ -2.31
CCDC7-209ENST00000539197 EFNA4P52798 201 aa0.59□□□□□ -2.31
CCDC7-209ENST00000539197 B2MP61769 119 aa0.59□□□□□ -2.31
CCDC7-209ENST00000539197 MIR22HGQ0VDD5 57 aa0.59□□□□□ -2.31
CCDC7-209ENST00000539197 CIRBPQ14011 172 aaKnown RBP0.59□□□□□ -2.31
CCDC7-209ENST00000539197 VMA21Q3ZAQ7 101 aa0.59□□□□□ -2.31
CCDC7-209ENST00000539197 ZNF431Q8TF32 576 aaPredicted RBP0.59□□□□□ -2.31
CCDC7-209ENST00000539197 THEM6Q8WUY1 208 aa0.59□□□□□ -2.31
CCDC7-209ENST00000539197 AMELYQ99218 206 aa0.59□□□□□ -2.31
CCDC7-209ENST00000539197 WFDC10AQ9H1F0 79 aa0.59□□□□□ -2.31
CCDC7-209ENST00000539197 TRAPPC2LQ9UL33 140 aa0.59□□□□□ -2.31
CCDC7-209ENST00000539197 TNFSF18Q9UNG2 199 aa0.59□□□□□ -2.31
CCDC7-209ENST00000539197 LAMTOR2Q9Y2Q5 125 aa0.59□□□□□ -2.31
CCDC7-209ENST00000539197 CAMSAP2Q08AD1 1489 aa0.59□□□□□ -2.32
CCDC7-209ENST00000539197 CECR2Q9BXF3 1484 aa0.59□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms