RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 H3BPC8 53 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 GSTZ1O43708 216 aaPredicted RBP0.5□□□□□ -2.33
HIF1A-204ENST00000539097 BPGMP07738 259 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 XCL1P47992 114 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 YPEL3P61236 119 aaPredicted RBP0.5□□□□□ -2.33
HIF1A-204ENST00000539097 RRAS2P62070 204 aaPredicted RBP0.5□□□□□ -2.33
HIF1A-204ENST00000539097 SLC35A2P78381 396 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 HPCAP84074 193 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 BSPH1Q075Z2 132 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 SPRNQ5BIV9 151 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 SBSNQ6UWP8 590 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 SDIM1Q6ZPB5 146 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 LINC00596Q86U02 117 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 SBSPONQ8IVN8 264 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 C1orf64Q8NEQ6 169 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 OR10D4PQ8NGN7 298 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 PSMF1Q92530 271 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 TCEAL4Q96EI5 215 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 ZC2HC1AQ96GY0 325 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 BIN3Q9NQY0 253 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 POLR3HQ9Y535 204 aaPredicted RBP0.5□□□□□ -2.33
HIF1A-204ENST00000539097 PCYT1BQ9Y5K3 369 aaPredicted RBP0.5□□□□□ -2.33
HIF1A-204ENST00000539097 ROCK2O75116 1388 aaKnown RBP0.5□□□□□ -2.33
HIF1A-204ENST00000539097 MED12LQ86YW9 2145 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 UACAQ9BZF9 1416 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 LMTK2Q8IWU2 1503 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 FSIP2Q5CZC0 6907 aa0.5□□□□□ -2.33
HIF1A-204ENST00000539097 DMDP11532 3685 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 TRAV36DV7A0A075B6V5 113 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 LINC00862A6NCI5 91 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 C19orf71A6NCJ1 209 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 FABP5P3A8MUU1 101 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 J3QQQ9 107 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 RGS5O15539 181 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 PFDN1O60925 122 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 GADD45GO95257 159 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 IGLV1-51P01701 117 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 HBZP02008 142 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 TNNC2P02585 160 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 GADD45AP24522 165 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 LPAR6P43657 344 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 RPL27AP46776 148 aaKnown RBP0.49□□□□□ -2.33
HIF1A-204ENST00000539097 RAB13P51153 203 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 MAXP61244 160 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 SNRPD2P62316 118 aaKnown RBP0.49□□□□□ -2.33
HIF1A-204ENST00000539097 IL15RAQ13261 267 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 JOSD1Q15040 202 aaPredicted RBP0.49□□□□□ -2.33
HIF1A-204ENST00000539097 TMED2Q15363 201 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 LIN52Q52LA3 116 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 RPL22L1Q6P5R6 122 aaKnown RBP0.49□□□□□ -2.33
HIF1A-204ENST00000539097 DPPA2Q7Z7J5 298 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 TRAPPC5Q8IUR0 188 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 ZNF561Q8N587 486 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 OR2T27Q8NH04 317 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 C1orf54Q8WWF1 131 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 TESCQ96BS2 214 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 CNBD2Q96M20 576 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 YPEL2Q96QA6 119 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 GPX7Q96SL4 187 aaPredicted RBP0.49□□□□□ -2.33
HIF1A-204ENST00000539097 CCL13Q99616 98 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 NDEL1Q9GZM8 345 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 SLC25A31Q9H0C2 315 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 BATF3Q9NR55 127 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 C14orf105Q9NVL8 296 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 NDUFB11Q9NX14 153 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 GLTPQ9NZD2 209 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 OR5V1Q9UGF6 321 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 COL6A6A6NMZ7 2263 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 NCOR1O75376 2440 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 NAV2Q8IVL1 2488 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 BDP1A6H8Y1 2624 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 A0A0J9YW62 118 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 G3V3Q6 166 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 COX7A2P2O60397 106 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 SH2D1AO60880 128 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 NCR2O95944 276 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 APOC1P02654 83 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 APODP05090 189 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 LINC00694P0DN24 101 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 CCL3P10147 92 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 ORM2P19652 201 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 CRHBPP24387 322 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 CD34P28906 385 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 S100A7P31151 101 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 CCR2P41597 374 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 CENPFP49454 3210 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 KRTAP10-1P60331 282 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 IQGAP2Q13576 1575 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 SCGB2B2Q4G0G5 96 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 SPANXN5Q5MJ07 72 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 C4orf22Q6V702 233 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 GOLT1AQ6ZVE7 132 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 KTN1-AS1Q86SY8 53 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 COMMD7Q86VX2 200 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 RTL9Q8NET4 1388 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 NAT14Q8WUY8 206 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 LZICQ8WZA0 190 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 CAPZA3Q96KX2 299 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 C12orf57Q99622 126 aa0.49□□□□□ -2.33
HIF1A-204ENST00000539097 SHANK2-AS3Q9BTD1 123 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms