RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 RNF182Q8N6D2 247 aa9.63□□□□□ -0.87
CHFR-216ENST00000538235 HSD17B11Q8NBQ5 300 aa9.63□□□□□ -0.87
CHFR-216ENST00000538235 TM2D3Q9BRN9 247 aa9.63□□□□□ -0.87
CHFR-216ENST00000538235 DNAJC4Q9NNZ3 241 aa9.63□□□□□ -0.87
CHFR-216ENST00000538235 FFAR4Q5NUL3 377 aa9.62□□□□□ -0.87
CHFR-216ENST00000538235 PXDC1Q5TGL8 231 aa9.62□□□□□ -0.87
CHFR-216ENST00000538235 ZNF586Q9NXT0 402 aa9.62□□□□□ -0.87
CHFR-216ENST00000538235 CD5P06127 495 aa9.61□□□□□ -0.87
CHFR-216ENST00000538235 ATF4P18848 351 aaPredicted RBP9.61□□□□□ -0.87
CHFR-216ENST00000538235 RAB31Q13636 194 aa9.61□□□□□ -0.87
CHFR-216ENST00000538235 TRPT1Q86TN4 253 aaKnown RBP9.61□□□□□ -0.87
CHFR-216ENST00000538235 KCNRGQ8N5I3 272 aa9.61□□□□□ -0.87
CHFR-216ENST00000538235 MFFQ9GZY8 342 aa9.61□□□□□ -0.87
CHFR-216ENST00000538235 ELOA3CA0A087WX78 387 aaPredicted RBP9.6□□□□□ -0.87
CHFR-216ENST00000538235 TEX46H3BTG2 121 aa9.6□□□□□ -0.87
CHFR-216ENST00000538235 NDUFB4O95168 129 aa9.6□□□□□ -0.87
CHFR-216ENST00000538235 IFNA5P01569 189 aa9.6□□□□□ -0.87
CHFR-216ENST00000538235 GALR1P47211 349 aa9.6□□□□□ -0.87
CHFR-216ENST00000538235 PAFAH1B2P68402 229 aa9.6□□□□□ -0.87
CHFR-216ENST00000538235 FLI1Q01543 452 aaPredicted RBP9.6□□□□□ -0.87
CHFR-216ENST00000538235 FAM78BQ5VT40 261 aa9.6□□□□□ -0.87
CHFR-216ENST00000538235 Q6ZRG5 221 aa9.6□□□□□ -0.87
CHFR-216ENST00000538235 OR1L4Q8NGR5 311 aa9.6□□□□□ -0.87
CHFR-216ENST00000538235 GATAD1Q8WUU5 269 aa9.6□□□□□ -0.87
CHFR-216ENST00000538235 SAT2Q96F10 170 aaPredicted RBP9.6□□□□□ -0.87
CHFR-216ENST00000538235 TUBA4BQ9H853 241 aa9.6□□□□□ -0.87
CHFR-216ENST00000538235 TIMM9Q9Y5J7 89 aa9.6□□□□□ -0.87
CHFR-216ENST00000538235 PRAC2D3DTV9 90 aa9.59□□□□□ -0.87
CHFR-216ENST00000538235 ZNF705DP0CH99 300 aaPredicted RBP9.59□□□□□ -0.87
CHFR-216ENST00000538235 ZNF705BP0CI00 300 aaPredicted RBP9.59□□□□□ -0.87
CHFR-216ENST00000538235 RPL7P18124 248 aaKnown RBP9.59□□□□□ -0.87
CHFR-216ENST00000538235 PSMB3P49720 205 aa9.59□□□□□ -0.87
CHFR-216ENST00000538235 ZNF345Q14585 488 aa9.59□□□□□ -0.87
CHFR-216ENST00000538235 ZNF726P1Q15940 193 aa9.59□□□□□ -0.87
CHFR-216ENST00000538235 LGALSLQ3ZCW2 172 aaPredicted RBP9.59□□□□□ -0.87
CHFR-216ENST00000538235 ACTL10Q5JWF8 245 aa9.59□□□□□ -0.87
CHFR-216ENST00000538235 OR2G3Q8NGZ4 309 aa9.59□□□□□ -0.87
CHFR-216ENST00000538235 FXYD5Q96DB9 178 aa9.59□□□□□ -0.87
CHFR-216ENST00000538235 PFDN5Q99471 154 aa9.59□□□□□ -0.87
CHFR-216ENST00000538235 ZNF331Q9NQX6 463 aaPredicted RBP9.59□□□□□ -0.87
CHFR-216ENST00000538235 LOC102724200A0A096LPH7 203 aaPredicted RBP9.58□□□□□ -0.88
CHFR-216ENST00000538235 ISLRO14498 428 aa9.58□□□□□ -0.88
CHFR-216ENST00000538235 HMGB3O15347 200 aaKnown RBP9.58□□□□□ -0.88
CHFR-216ENST00000538235 UQCC3Q6UW78 93 aa9.58□□□□□ -0.88
CHFR-216ENST00000538235 RPP25LQ8N5L8 163 aaKnown RBP9.58□□□□□ -0.88
CHFR-216ENST00000538235 INO80EQ8NBZ0 244 aaPredicted RBP9.58□□□□□ -0.88
CHFR-216ENST00000538235 SCGB1C1Q8TD33 95 aa9.58□□□□□ -0.88
CHFR-216ENST00000538235 PHYHIPLQ96FC7 376 aa9.58□□□□□ -0.88
CHFR-216ENST00000538235 LINC00052Q96N35 136 aa9.58□□□□□ -0.88
CHFR-216ENST00000538235 GPR82Q96P67 336 aa9.58□□□□□ -0.88
CHFR-216ENST00000538235 FUT9Q9Y231 359 aa9.58□□□□□ -0.88
CHFR-216ENST00000538235 STARD9Q9P2P6 4700 aa9.58□□□□□ -0.88
CHFR-216ENST00000538235 A0A0D9SG52 128 aa9.57□□□□□ -0.88
CHFR-216ENST00000538235 A8MTW9 85 aa9.57□□□□□ -0.88
CHFR-216ENST00000538235 ZNF705FA8MVS1 300 aaPredicted RBP9.57□□□□□ -0.88
CHFR-216ENST00000538235 C17orf112F2Z3M2 114 aa9.57□□□□□ -0.88
CHFR-216ENST00000538235 H3BMM0 161 aa9.57□□□□□ -0.88
CHFR-216ENST00000538235 OR10J4P0C629 311 aa9.57□□□□□ -0.88
CHFR-216ENST00000538235 HLA-DRB4P13762 266 aa9.57□□□□□ -0.88
CHFR-216ENST00000538235 ZNF266Q14584 549 aa9.57□□□□□ -0.88
CHFR-216ENST00000538235 DEFB135Q30KP9 77 aa9.57□□□□□ -0.88
CHFR-216ENST00000538235 AMTNQ6UX39 209 aa9.57□□□□□ -0.88
CHFR-216ENST00000538235 ZNF709Q8N972 641 aa9.57□□□□□ -0.88
CHFR-216ENST00000538235 C16orf92Q96LL3 132 aa9.57□□□□□ -0.88
CHFR-216ENST00000538235 PSMG3Q9BT73 122 aaPredicted RBP9.57□□□□□ -0.88
CHFR-216ENST00000538235 SAV1Q9H4B6 383 aaPredicted RBP9.57□□□□□ -0.88
CHFR-216ENST00000538235 TMEM14CQ9P0S9 112 aa9.57□□□□□ -0.88
CHFR-216ENST00000538235 HLA-DRB4X5D2U9 266 aa9.57□□□□□ -0.88
CHFR-216ENST00000538235 CSMD3Q7Z407 3707 aa9.57□□□□□ -0.88
CHFR-216ENST00000538235 TRBV19A0A075B6N1 114 aa9.56□□□□□ -0.88
CHFR-216ENST00000538235 A0A0J9YX75 114 aa9.56□□□□□ -0.88
CHFR-216ENST00000538235 M0R3E3 92 aa9.56□□□□□ -0.88
CHFR-216ENST00000538235 BCL2L11O43521 198 aa9.56□□□□□ -0.88
CHFR-216ENST00000538235 BPIFA4PQ86YQ2 179 aa9.56□□□□□ -0.88
CHFR-216ENST00000538235 RCHY1Q96PM5 261 aa9.56□□□□□ -0.88
CHFR-216ENST00000538235 OVOL2Q9BRP0 275 aa9.56□□□□□ -0.88
CHFR-216ENST00000538235 MRPL32Q9BYC8 188 aaKnown RBP9.56□□□□□ -0.88
CHFR-216ENST00000538235 HRH4Q9H3N8 390 aa9.56□□□□□ -0.88
CHFR-216ENST00000538235 KCNIP2Q9NS61 270 aa9.56□□□□□ -0.88
CHFR-216ENST00000538235 RPRMQ9NS64 109 aa9.56□□□□□ -0.88
CHFR-216ENST00000538235 IGKV3-20P01619 116 aa9.55□□□□□ -0.88
CHFR-216ENST00000538235 MEOX2P50222 304 aa9.55□□□□□ -0.88
CHFR-216ENST00000538235 FXYD7P58549 80 aa9.55□□□□□ -0.88
CHFR-216ENST00000538235 LCN15Q6UWW0 184 aa9.55□□□□□ -0.88
CHFR-216ENST00000538235 FOXI2Q6ZQN5 318 aa9.55□□□□□ -0.88
CHFR-216ENST00000538235 TMUB2Q71RG4 321 aa9.55□□□□□ -0.88
CHFR-216ENST00000538235 EXOC3-AS1Q8N2X6 119 aa9.55□□□□□ -0.88
CHFR-216ENST00000538235 SLC35B3Q9H1N7 401 aa9.55□□□□□ -0.88
CHFR-216ENST00000538235 HIST1H1EP10412 219 aaKnown RBP9.54□□□□□ -0.88
CHFR-216ENST00000538235 SPP1P10451 314 aa9.54□□□□□ -0.88
CHFR-216ENST00000538235 FHITP49789 147 aa9.54□□□□□ -0.88
CHFR-216ENST00000538235 SNRPD3P62318 126 aaKnown RBP9.54□□□□□ -0.88
CHFR-216ENST00000538235 CTAG1AP78358 180 aa9.54□□□□□ -0.88
CHFR-216ENST00000538235 PSG3Q16557 428 aa9.54□□□□□ -0.88
CHFR-216ENST00000538235 CSNK1G2-AS1Q8NCQ2 148 aa9.54□□□□□ -0.88
CHFR-216ENST00000538235 OR10G4Q8NGN3 311 aa9.54□□□□□ -0.88
CHFR-216ENST00000538235 OR10G9Q8NGN4 311 aa9.54□□□□□ -0.88
CHFR-216ENST00000538235 OR10G7Q8NGN6 311 aa9.54□□□□□ -0.88
CHFR-216ENST00000538235 BLNKQ8WV28 456 aa9.54□□□□□ -0.88
CHFR-216ENST00000538235 CLEC5AQ9NY25 188 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms