RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 ZNF738Q8NE65 137 aa15.44■□□□□ 0.06
CCDC78-215ENST00000538176 OR1L4Q8NGR5 311 aa15.44■□□□□ 0.06
CCDC78-215ENST00000538176 CHAC2Q8WUX2 184 aa15.44■□□□□ 0.06
CCDC78-215ENST00000538176 IGF2BP2-AS1Q96M15 143 aa15.44■□□□□ 0.06
CCDC78-215ENST00000538176 PFDN5Q99471 154 aa15.44■□□□□ 0.06
CCDC78-215ENST00000538176 SLC50A1Q9BRV3 221 aa15.44■□□□□ 0.06
CCDC78-215ENST00000538176 WDR83OSQ9Y284 106 aa15.44■□□□□ 0.06
CCDC78-215ENST00000538176 IGHV3OR16-12A0A075B7B8 117 aa15.43■□□□□ 0.06
CCDC78-215ENST00000538176 CNN1P51911 297 aaKnown RBP15.43■□□□□ 0.06
CCDC78-215ENST00000538176 PSG3Q16557 428 aa15.43■□□□□ 0.06
CCDC78-215ENST00000538176 RNF126Q9BV68 326 aa15.43■□□□□ 0.06
CCDC78-215ENST00000538176 BATF3Q9NR55 127 aa15.43■□□□□ 0.06
CCDC78-215ENST00000538176 MRPS12O15235 138 aaKnown RBP15.42■□□□□ 0.06
CCDC78-215ENST00000538176 MPDU1O75352 247 aa15.42■□□□□ 0.06
CCDC78-215ENST00000538176 RPL29P47914 159 aaKnown RBP15.42■□□□□ 0.06
CCDC78-215ENST00000538176 DEFA1P59665 94 aa15.42■□□□□ 0.06
CCDC78-215ENST00000538176 DEFA3P59666 94 aa15.42■□□□□ 0.06
CCDC78-215ENST00000538176 RRN3P1Q2M238 152 aa15.42■□□□□ 0.06
CCDC78-215ENST00000538176 C12orf74Q32Q52 190 aa15.42■□□□□ 0.06
CCDC78-215ENST00000538176 AMTNQ6UX39 209 aa15.42■□□□□ 0.06
CCDC78-215ENST00000538176 TMEM37Q8WXS4 190 aa15.42■□□□□ 0.06
CCDC78-215ENST00000538176 TMEM208Q9BTX3 173 aa15.42■□□□□ 0.06
CCDC78-215ENST00000538176 NMES1Q9C002 83 aa15.42■□□□□ 0.06
CCDC78-215ENST00000538176 DEFB131BA0A096LNP1 70 aa15.41■□□□□ 0.06
CCDC78-215ENST00000538176 PRR20EP86478 221 aa15.41■□□□□ 0.06
CCDC78-215ENST00000538176 PRR20CP86479 221 aa15.41■□□□□ 0.06
CCDC78-215ENST00000538176 PRR20DP86480 221 aa15.41■□□□□ 0.06
CCDC78-215ENST00000538176 PRR20BP86481 221 aa15.41■□□□□ 0.06
CCDC78-215ENST00000538176 PRR20AP86496 221 aa15.41■□□□□ 0.06
CCDC78-215ENST00000538176 C1orf158Q8N1D5 194 aa15.41■□□□□ 0.06
CCDC78-215ENST00000538176 RNF182Q8N6D2 247 aa15.41■□□□□ 0.06
CCDC78-215ENST00000538176 SLC25A31Q9H0C2 315 aa15.41■□□□□ 0.06
CCDC78-215ENST00000538176 PPP1R14DQ9NXH3 145 aa15.41■□□□□ 0.06
CCDC78-215ENST00000538176 APLNQ9ULZ1 77 aa15.41■□□□□ 0.06
CCDC78-215ENST00000538176 INMT-MINDY4F8WBC2 141 aa15.4■□□□□ 0.06
CCDC78-215ENST00000538176 GUK1Q16774 197 aa15.4■□□□□ 0.06
CCDC78-215ENST00000538176 IGFL4Q6B9Z1 124 aa15.4■□□□□ 0.06
CCDC78-215ENST00000538176 OR11H7Q8NGC8 314 aa15.4■□□□□ 0.06
CCDC78-215ENST00000538176 OR8A1Q8NGG7 326 aa15.4■□□□□ 0.06
CCDC78-215ENST00000538176 ZNF331Q9NQX6 463 aaPredicted RBP15.4■□□□□ 0.06
CCDC78-215ENST00000538176 CELA1Q9UNI1 258 aa15.4■□□□□ 0.06
CCDC78-215ENST00000538176 ALMS1Q8TCU4 4167 aa15.39■□□□□ 0.05
CCDC78-215ENST00000538176 E5RGE8 158 aa15.39■□□□□ 0.05
CCDC78-215ENST00000538176 INSP01308 110 aa15.39■□□□□ 0.05
CCDC78-215ENST00000538176 BAXQ07812 192 aa15.39■□□□□ 0.05
CCDC78-215ENST00000538176 OXA1LQ15070 435 aa15.39■□□□□ 0.05
CCDC78-215ENST00000538176 MARVELD1Q9BSK0 173 aa15.39■□□□□ 0.05
CCDC78-215ENST00000538176 PXMP4Q9Y6I8 212 aa15.39■□□□□ 0.05
CCDC78-215ENST00000538176 HYDINQ4G0P3 5121 aa15.38■□□□□ 0.05
CCDC78-215ENST00000538176 IGHV4-4A0A075B6R2 117 aa15.38■□□□□ 0.05
CCDC78-215ENST00000538176 IGSF23A1L1A6 192 aa15.38■□□□□ 0.05
CCDC78-215ENST00000538176 RHOBP62745 196 aa15.38■□□□□ 0.05
CCDC78-215ENST00000538176 IFITM3Q01628 133 aa15.38■□□□□ 0.05
CCDC78-215ENST00000538176 MIC13Q5XKP0 118 aa15.38■□□□□ 0.05
CCDC78-215ENST00000538176 TMEM256Q8N2U0 113 aa15.38■□□□□ 0.05
CCDC78-215ENST00000538176 RPUSD4Q96CM3 377 aaKnown RBP15.38■□□□□ 0.05
CCDC78-215ENST00000538176 FAM210BQ96KR6 192 aa15.38■□□□□ 0.05
CCDC78-215ENST00000538176 SLC39A9Q9NUM3 307 aa15.38■□□□□ 0.05
CCDC78-215ENST00000538176 DKK2Q9UBU2 259 aa15.38■□□□□ 0.05
CCDC78-215ENST00000538176 LOC102723971A0A1B0GUV8 181 aa15.37■□□□□ 0.05
CCDC78-215ENST00000538176 BOLA2-SMG1P6H3BVE0 249 aa15.37■□□□□ 0.05
CCDC78-215ENST00000538176 EMP1P54849 157 aa15.37■□□□□ 0.05
CCDC78-215ENST00000538176 HIST1H1AQ02539 215 aaPredicted RBP15.37■□□□□ 0.05
CCDC78-215ENST00000538176 OPCMLQ14982 345 aa15.37■□□□□ 0.05
CCDC78-215ENST00000538176 SPINK13Q1W4C9 94 aa15.37■□□□□ 0.05
CCDC78-215ENST00000538176 NIPSNAP3BQ9BS92 247 aa15.37■□□□□ 0.05
CCDC78-215ENST00000538176 UBE2L5PA0A1B0GUS4 154 aa15.36■□□□□ 0.05
CCDC78-215ENST00000538176 NDUFAF3Q9BU61 184 aa15.36■□□□□ 0.05
CCDC78-215ENST00000538176 CRXO43186 299 aaPredicted RBP15.35■□□□□ 0.05
CCDC78-215ENST00000538176 ZNF253O75346 499 aa15.35■□□□□ 0.05
CCDC78-215ENST00000538176 IGLC2P0DOY2 106 aa15.35■□□□□ 0.05
CCDC78-215ENST00000538176 FGF7P21781 194 aa15.35■□□□□ 0.05
CCDC78-215ENST00000538176 TSPOP30536 169 aa15.35■□□□□ 0.05
CCDC78-215ENST00000538176 FAM222AQ5U5X8 452 aa15.35■□□□□ 0.05
CCDC78-215ENST00000538176 M0R2Z0 102 aa15.34■□□□□ 0.05
CCDC78-215ENST00000538176 CDKN1BP46527 198 aa15.34■□□□□ 0.05
CCDC78-215ENST00000538176 OR10J6PQ8NGY7 276 aa15.34■□□□□ 0.05
CCDC78-215ENST00000538176 C20orf144Q9BQM9 153 aa15.34■□□□□ 0.05
CCDC78-215ENST00000538176 KCNIP2Q9NS61 270 aa15.34■□□□□ 0.05
CCDC78-215ENST00000538176 YTHDF2Q9Y5A9 579 aaKnown RBP15.34■□□□□ 0.05
CCDC78-215ENST00000538176 SIX6O95475 246 aa15.33■□□□□ 0.04
CCDC78-215ENST00000538176 PET100P0DJ07 73 aa15.33■□□□□ 0.04
CCDC78-215ENST00000538176 ZNF767PQ75MW2 155 aa15.33■□□□□ 0.04
CCDC78-215ENST00000538176 OR5C1Q8NGR4 320 aa15.33■□□□□ 0.04
CCDC78-215ENST00000538176 SAT2Q96F10 170 aaPredicted RBP15.33■□□□□ 0.04
CCDC78-215ENST00000538176 NPCDR1Q9BY65 106 aa15.33■□□□□ 0.04
CCDC78-215ENST00000538176 TMEM14CQ9P0S9 112 aa15.33■□□□□ 0.04
CCDC78-215ENST00000538176 LYRM9A8MSI8 78 aa15.32■□□□□ 0.04
CCDC78-215ENST00000538176 NHLH2Q02577 135 aa15.32■□□□□ 0.04
CCDC78-215ENST00000538176 MORN5Q5VZ52 161 aa15.32■□□□□ 0.04
CCDC78-215ENST00000538176 H3BQ15 152 aa15.31■□□□□ 0.04
CCDC78-215ENST00000538176 SSNA1O43805 119 aa15.31■□□□□ 0.04
CCDC78-215ENST00000538176 P0DMU3 169 aa15.31■□□□□ 0.04
CCDC78-215ENST00000538176 FAM231AP0DMU4 169 aa15.31■□□□□ 0.04
CCDC78-215ENST00000538176 FAM231CP0DMU5 169 aa15.31■□□□□ 0.04
CCDC78-215ENST00000538176 TAS2R60P59551 318 aa15.31■□□□□ 0.04
CCDC78-215ENST00000538176 LRRC37A5PQ49AS3 106 aa15.31■□□□□ 0.04
CCDC78-215ENST00000538176 RPP25LQ8N5L8 163 aaKnown RBP15.31■□□□□ 0.04
CCDC78-215ENST00000538176 LINC01587Q99440 93 aa15.31■□□□□ 0.04
CCDC78-215ENST00000538176 HIST1H1EP10412 219 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms