RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 PLCE1Q9P212 2302 aa8.53□□□□□ -1.04
RTN3-208ENST00000537981 A0A087WX48 190 aa8.52□□□□□ -1.04
RTN3-208ENST00000537981 CRLF1O75462 422 aa8.52□□□□□ -1.04
RTN3-208ENST00000537981 GRPP07492 148 aa8.52□□□□□ -1.04
RTN3-208ENST00000537981 ERVK11-1P61568 191 aa8.52□□□□□ -1.04
RTN3-208ENST00000537981 CFAP126Q5VTH2 177 aa8.52□□□□□ -1.04
RTN3-208ENST00000537981 POLDIP2Q9Y2S7 368 aa8.52□□□□□ -1.04
RTN3-208ENST00000537981 PGPA6NDG6 321 aa8.52□□□□□ -1.05
RTN3-208ENST00000537981 M0QXV9 152 aa8.52□□□□□ -1.05
RTN3-208ENST00000537981 NDUFS7O75251 213 aa8.52□□□□□ -1.05
RTN3-208ENST00000537981 SEC61GP60059 68 aa8.52□□□□□ -1.05
RTN3-208ENST00000537981 ZFP2Q6ZN57 461 aa8.52□□□□□ -1.05
RTN3-208ENST00000537981 Q6ZS52 159 aa8.52□□□□□ -1.05
RTN3-208ENST00000537981 LRRC75A-AS1Q8N1F1 130 aa8.52□□□□□ -1.05
RTN3-208ENST00000537981 RPRMLQ8N4K4 120 aa8.52□□□□□ -1.05
RTN3-208ENST00000537981 IFI27L1Q96BM0 104 aa8.52□□□□□ -1.05
RTN3-208ENST00000537981 FLYWCH2Q96CP2 140 aaKnown RBP8.52□□□□□ -1.05
RTN3-208ENST00000537981 FAM173AQ9BQD7 235 aa8.52□□□□□ -1.05
RTN3-208ENST00000537981 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.51□□□□□ -1.05
RTN3-208ENST00000537981 J3QT63 122 aa8.51□□□□□ -1.05
RTN3-208ENST00000537981 GAS8-AS1O95177 125 aa8.51□□□□□ -1.05
RTN3-208ENST00000537981 RRN3P1Q2M238 152 aa8.51□□□□□ -1.05
RTN3-208ENST00000537981 MORN3Q6PF18 240 aaPredicted RBP8.51□□□□□ -1.05
RTN3-208ENST00000537981 GGNQ86UU5 652 aa8.51□□□□□ -1.05
RTN3-208ENST00000537981 ZGRF1Q86YA3 2104 aa8.51□□□□□ -1.05
RTN3-208ENST00000537981 EPDR1Q9UM22 224 aa8.51□□□□□ -1.05
RTN3-208ENST00000537981 C15orf61A6NNL5 157 aa8.51□□□□□ -1.05
RTN3-208ENST00000537981 SS18L1O75177 396 aaPredicted RBP8.51□□□□□ -1.05
RTN3-208ENST00000537981 FSTL3O95633 263 aa8.51□□□□□ -1.05
RTN3-208ENST00000537981 LIFP15018 202 aa8.51□□□□□ -1.05
RTN3-208ENST00000537981 PCBD1P61457 104 aa8.51□□□□□ -1.05
RTN3-208ENST00000537981 PAX8Q06710 450 aa8.51□□□□□ -1.05
RTN3-208ENST00000537981 ICE1Q9Y2F5 2266 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 hADV38S2A0JD32 116 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 TMEM30CPA0ZSE6 113 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 TMEM213A2RRL7 107 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 HAX1O00165 279 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 MYCNOSP40205 109 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 PLP2Q04941 152 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 EDDM3AQ14507 147 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 ZFAND6Q6FIF0 208 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 AMN1Q8IY45 258 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 MRPL36Q9P0J6 103 aaKnown RBP8.5□□□□□ -1.05
RTN3-208ENST00000537981 TRAV4A0A0B4J268 109 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 FABP5P3A8MUU1 101 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 ZFAND5O76080 213 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 RFPL3SP0C7P2 107 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 COL8A1P27658 744 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 GPR179Q6PRD1 2367 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 TMEM105Q8N8V8 129 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 C8orf46Q8TAG6 207 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 DEFB126Q9BYW3 111 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 VPREB3Q9UKI3 123 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 SIT1Q9Y3P8 196 aa8.5□□□□□ -1.05
RTN3-208ENST00000537981 ZFHX2Q9C0A1 2572 aaPredicted RBP8.5□□□□□ -1.05
RTN3-208ENST00000537981 TRGV8A0A0C4DH27 118 aa8.49□□□□□ -1.05
RTN3-208ENST00000537981 SSR4P51571 173 aa8.49□□□□□ -1.05
RTN3-208ENST00000537981 ERVK-16P61578 105 aa8.49□□□□□ -1.05
RTN3-208ENST00000537981 PMS2CLQ68D20 193 aa8.49□□□□□ -1.05
RTN3-208ENST00000537981 FAM159AQ6UWV7 190 aa8.49□□□□□ -1.05
RTN3-208ENST00000537981 Q6ZQT7 251 aa8.49□□□□□ -1.05
RTN3-208ENST00000537981 TEX29Q8N6K0 151 aa8.49□□□□□ -1.05
RTN3-208ENST00000537981 WDR31Q8NA23 367 aa8.49□□□□□ -1.05
RTN3-208ENST00000537981 OR5AN1Q8NGI8 311 aa8.49□□□□□ -1.05
RTN3-208ENST00000537981 SPRY4Q9C004 299 aa8.49□□□□□ -1.05
RTN3-208ENST00000537981 B3GALT5-AS1P59052 145 aa8.49□□□□□ -1.05
RTN3-208ENST00000537981 SRSF12Q8WXF0 261 aaKnown RBP8.49□□□□□ -1.05
RTN3-208ENST00000537981 HIGD1BQ9P298 99 aa8.49□□□□□ -1.05
RTN3-208ENST00000537981 EP300Q09472 2414 aaPredicted RBP8.49□□□□□ -1.05
RTN3-208ENST00000537981 PSMB2P49721 201 aa8.48□□□□□ -1.05
RTN3-208ENST00000537981 NDUFV3P56181 108 aaKnown RBP8.48□□□□□ -1.05
RTN3-208ENST00000537981 ZC2HC1BQ5TFG8 222 aa8.48□□□□□ -1.05
RTN3-208ENST00000537981 TMEM14BQ9NUH8 114 aa8.48□□□□□ -1.05
RTN3-208ENST00000537981 RIF1Q5UIP0 2472 aaKnown RBP8.48□□□□□ -1.05
RTN3-208ENST00000537981 BOD1L1Q8NFC6 3051 aa8.48□□□□□ -1.05
RTN3-208ENST00000537981 A0A1B0GUT8 65 aa8.48□□□□□ -1.05
RTN3-208ENST00000537981 LILRA5A6NI73 299 aa8.48□□□□□ -1.05
RTN3-208ENST00000537981 E7EUB6 86 aa8.48□□□□□ -1.05
RTN3-208ENST00000537981 HBDP02042 147 aa8.48□□□□□ -1.05
RTN3-208ENST00000537981 MEOX1P50221 254 aa8.48□□□□□ -1.05
RTN3-208ENST00000537981 HSPE1P61604 102 aaKnown RBP8.48□□□□□ -1.05
RTN3-208ENST00000537981 ZNRD1Q9P1U0 126 aa8.48□□□□□ -1.05
RTN3-208ENST00000537981 PTPRZ1P23471 2315 aaPredicted RBP8.47□□□□□ -1.05
RTN3-208ENST00000537981 GAGE12JA6NER3 117 aa8.47□□□□□ -1.05
RTN3-208ENST00000537981 COX7A2P2O60397 106 aa8.47□□□□□ -1.05
RTN3-208ENST00000537981 GAGE7O76087 117 aa8.47□□□□□ -1.05
RTN3-208ENST00000537981 NPYP01303 97 aa8.47□□□□□ -1.05
RTN3-208ENST00000537981 GAGE12FP0CL80 117 aa8.47□□□□□ -1.05
RTN3-208ENST00000537981 GAGE12GP0CL81 117 aa8.47□□□□□ -1.05
RTN3-208ENST00000537981 GAGE12IP0CL82 117 aa8.47□□□□□ -1.05
RTN3-208ENST00000537981 FKBP2P26885 142 aaKnown RBP8.47□□□□□ -1.05
RTN3-208ENST00000537981 GAGE4Q13068 117 aa8.47□□□□□ -1.05
RTN3-208ENST00000537981 PRNTQ86SH4 94 aa8.47□□□□□ -1.05
RTN3-208ENST00000537981 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.47□□□□□ -1.05
RTN3-208ENST00000537981 SVEP1Q4LDE5 3571 aa8.47□□□□□ -1.05
RTN3-208ENST00000537981 C15orf65H3BRN8 121 aa8.47□□□□□ -1.05
RTN3-208ENST00000537981 SRYQ05066 204 aa8.47□□□□□ -1.05
RTN3-208ENST00000537981 C10orf113Q5VZT2 155 aa8.47□□□□□ -1.05
RTN3-208ENST00000537981 LINC00305Q7Z4B0 112 aa8.47□□□□□ -1.05
RTN3-208ENST00000537981 NRGNQ92686 78 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms