RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 EGFEM1PQ0D2K5 195 aa18.16■□□□□ 0.5
HMGA2-208ENST00000537429 K7EQG2 157 aa18.15■□□□□ 0.5
HMGA2-208ENST00000537429 SOCS3O14543 225 aa18.15■□□□□ 0.5
HMGA2-208ENST00000537429 IFNA7P01567 189 aa18.15■□□□□ 0.5
HMGA2-208ENST00000537429 H2AFB1P0C5Y9 115 aa18.15■□□□□ 0.5
HMGA2-208ENST00000537429 NBEAP1P0C6P0 100 aa18.15■□□□□ 0.5
HMGA2-208ENST00000537429 UBE2L3P68036 154 aaKnown RBP18.15■□□□□ 0.5
HMGA2-208ENST00000537429 GUK1Q16774 197 aa18.15■□□□□ 0.5
HMGA2-208ENST00000537429 BEAN1Q3B7T3 259 aa18.15■□□□□ 0.5
HMGA2-208ENST00000537429 SFT2D1Q8WV19 159 aa18.15■□□□□ 0.5
HMGA2-208ENST00000537429 SAT2Q96F10 170 aaPredicted RBP18.15■□□□□ 0.5
HMGA2-208ENST00000537429 ZMAT5Q9UDW3 170 aaKnown RBP18.15■□□□□ 0.5
HMGA2-208ENST00000537429 ZNF705EA8MWA4 302 aaPredicted RBP18.14■□□□□ 0.49
HMGA2-208ENST00000537429 GCHFRP30047 84 aa18.14■□□□□ 0.49
HMGA2-208ENST00000537429 FGF8P55075 233 aaPredicted RBP18.14■□□□□ 0.49
HMGA2-208ENST00000537429 TRBV19A0A075B6N1 114 aa18.13■□□□□ 0.49
HMGA2-208ENST00000537429 OR4C46A6NHA9 309 aa18.13■□□□□ 0.49
HMGA2-208ENST00000537429 H3BTX0 84 aa18.13■□□□□ 0.49
HMGA2-208ENST00000537429 SUN5Q8TC36 379 aa18.13■□□□□ 0.49
HMGA2-208ENST00000537429 KRTAP10-11P60412 298 aa18.12■□□□□ 0.49
HMGA2-208ENST00000537429 IFITM2Q01629 132 aa18.12■□□□□ 0.49
HMGA2-208ENST00000537429 PDE6HQ13956 83 aa18.12■□□□□ 0.49
HMGA2-208ENST00000537429 SAMD13Q5VXD3 122 aa18.12■□□□□ 0.49
HMGA2-208ENST00000537429 FAM24BQ8N5W8 94 aa18.12■□□□□ 0.49
HMGA2-208ENST00000537429 BLNKQ8WV28 456 aa18.12■□□□□ 0.49
HMGA2-208ENST00000537429 ZNF331Q9NQX6 463 aaPredicted RBP18.12■□□□□ 0.49
HMGA2-208ENST00000537429 UBQLN2Q9UHD9 624 aa18.12■□□□□ 0.49
HMGA2-208ENST00000537429 SORL1Q92673 2214 aa18.11■□□□□ 0.49
HMGA2-208ENST00000537429 TRAV1-1A0A0B4J248 108 aa18.11■□□□□ 0.49
HMGA2-208ENST00000537429 SLC17A3O00476 420 aa18.11■□□□□ 0.49
HMGA2-208ENST00000537429 ZNF253O75346 499 aa18.11■□□□□ 0.49
HMGA2-208ENST00000537429 NDUFB4O95168 129 aa18.11■□□□□ 0.49
HMGA2-208ENST00000537429 LRRC20Q8TCA0 184 aa18.11■□□□□ 0.49
HMGA2-208ENST00000537429 C16orf92Q96LL3 132 aa18.11■□□□□ 0.49
HMGA2-208ENST00000537429 TMPRSS5Q9H3S3 457 aa18.11■□□□□ 0.49
HMGA2-208ENST00000537429 TMEM167BQ9NRX6 74 aa18.11■□□□□ 0.49
HMGA2-208ENST00000537429 ISLRO14498 428 aa18.1■□□□□ 0.49
HMGA2-208ENST00000537429 BLOC1S1P78537 153 aa18.1■□□□□ 0.49
HMGA2-208ENST00000537429 SLC50A1Q9BRV3 221 aa18.1■□□□□ 0.49
HMGA2-208ENST00000537429 TRAV8-2A0A0B4J237 113 aa18.09■□□□□ 0.49
HMGA2-208ENST00000537429 IQCF2Q8IXL9 164 aa18.09■□□□□ 0.49
HMGA2-208ENST00000537429 A0A1B0GV50 99 aa18.08■□□□□ 0.49
HMGA2-208ENST00000537429 PSMB3P49720 205 aa18.08■□□□□ 0.49
HMGA2-208ENST00000537429 KPRPQ5T749 579 aaPredicted RBP18.08■□□□□ 0.49
HMGA2-208ENST00000537429 GTSCR1Q86UQ5 136 aa18.08■□□□□ 0.49
HMGA2-208ENST00000537429 PRR25Q96S07 402 aa18.08■□□□□ 0.49
HMGA2-208ENST00000537429 TEX46H3BTG2 121 aa18.08■□□□□ 0.48
HMGA2-208ENST00000537429 HBE1P02100 147 aa18.08■□□□□ 0.48
HMGA2-208ENST00000537429 CD7P09564 240 aa18.08■□□□□ 0.48
HMGA2-208ENST00000537429 ZNF688P0C7X2 276 aa18.08■□□□□ 0.48
HMGA2-208ENST00000537429 ID1P41134 155 aa18.08■□□□□ 0.48
HMGA2-208ENST00000537429 IGFL4Q6B9Z1 124 aa18.08■□□□□ 0.48
HMGA2-208ENST00000537429 CD81P60033 236 aa18.07■□□□□ 0.48
HMGA2-208ENST00000537429 SNRPD3P62318 126 aaKnown RBP18.07■□□□□ 0.48
HMGA2-208ENST00000537429 PSG9Q00887 426 aa18.07■□□□□ 0.48
HMGA2-208ENST00000537429 LYPD6BQ8NI32 183 aa18.07■□□□□ 0.48
HMGA2-208ENST00000537429 RANP62826 216 aaKnown RBP18.06■□□□□ 0.48
HMGA2-208ENST00000537429 CCL20P78556 96 aa18.06■□□□□ 0.48
HMGA2-208ENST00000537429 ODF3L2Q3SX64 289 aa18.06■□□□□ 0.48
HMGA2-208ENST00000537429 ZNF767PQ75MW2 155 aa18.06■□□□□ 0.48
HMGA2-208ENST00000537429 LYPD1Q8N2G4 141 aa18.06■□□□□ 0.48
HMGA2-208ENST00000537429 FAM110AQ9BQ89 295 aa18.06■□□□□ 0.48
HMGA2-208ENST00000537429 MAP6D1Q9H9H5 199 aa18.06■□□□□ 0.48
HMGA2-208ENST00000537429 C19orf73Q9NVV2 129 aa18.06■□□□□ 0.48
HMGA2-208ENST00000537429 DNAH3Q8TD57 4116 aa18.06■□□□□ 0.48
HMGA2-208ENST00000537429 HLA-DMBP28068 263 aa18.05■□□□□ 0.48
HMGA2-208ENST00000537429 RNF182Q8N6D2 247 aa18.05■□□□□ 0.48
HMGA2-208ENST00000537429 C20orf173Q96LM9 149 aa18.05■□□□□ 0.48
HMGA2-208ENST00000537429 LINC00052Q96N35 136 aa18.05■□□□□ 0.48
HMGA2-208ENST00000537429 CLEC5AQ9NY25 188 aa18.05■□□□□ 0.48
HMGA2-208ENST00000537429 CMC4P56277 68 aaPredicted RBP18.04■□□□□ 0.48
HMGA2-208ENST00000537429 PSMG4Q5JS54 123 aa18.04■□□□□ 0.48
HMGA2-208ENST00000537429 EXOC3-AS1Q8N2X6 119 aa18.04■□□□□ 0.48
HMGA2-208ENST00000537429 Q9H3A6 140 aa18.04■□□□□ 0.48
HMGA2-208ENST00000537429 NOTCH1P46531 2555 aa18.04■□□□□ 0.48
HMGA2-208ENST00000537429 DEFB131AP59861 70 aa18.03■□□□□ 0.48
HMGA2-208ENST00000537429 PCNPQ8WW12 178 aaKnown RBP18.03■□□□□ 0.48
HMGA2-208ENST00000537429 AAMDCQ9H7C9 122 aa18.03■□□□□ 0.48
HMGA2-208ENST00000537429 A0A1W2PRE2 83 aa18.03■□□□□ 0.48
HMGA2-208ENST00000537429 NMBP08949 121 aa18.03■□□□□ 0.48
HMGA2-208ENST00000537429 ICAM4Q14773 271 aa18.03■□□□□ 0.48
HMGA2-208ENST00000537429 PSG3Q16557 428 aa18.03■□□□□ 0.48
HMGA2-208ENST00000537429 Q8N1Y9 231 aa18.03■□□□□ 0.48
HMGA2-208ENST00000537429 OR11H12B2RN74 326 aa18.02■□□□□ 0.47
HMGA2-208ENST00000537429 PRB2P02812 416 aaPredicted RBP18.02■□□□□ 0.47
HMGA2-208ENST00000537429 YTHDF2Q9Y5A9 579 aaKnown RBP18.02■□□□□ 0.47
HMGA2-208ENST00000537429 FAM74A7A6NL05 159 aa18.01■□□□□ 0.47
HMGA2-208ENST00000537429 PPT1P50897 306 aa18.01■□□□□ 0.47
HMGA2-208ENST00000537429 UBE2G2P60604 165 aa18.01■□□□□ 0.47
HMGA2-208ENST00000537429 PMS2P11Q13670 270 aa18.01■□□□□ 0.47
HMGA2-208ENST00000537429 OTORQ9NRC9 128 aa18.01■□□□□ 0.47
HMGA2-208ENST00000537429 PRELID1Q9Y255 219 aa18.01■□□□□ 0.47
HMGA2-208ENST00000537429 ARL2-SNX15V9GYD0 113 aa18.01■□□□□ 0.47
HMGA2-208ENST00000537429 NBEAL1Q6ZS30 2694 aa18■□□□□ 0.47
HMGA2-208ENST00000537429 PGPA6NDG6 321 aa18■□□□□ 0.47
HMGA2-208ENST00000537429 M0R3E3 92 aa18■□□□□ 0.47
HMGA2-208ENST00000537429 APRG1Q8IVJ8 170 aa18■□□□□ 0.47
HMGA2-208ENST00000537429 MRPL53Q96EL3 112 aaKnown RBP18■□□□□ 0.47
HMGA2-208ENST00000537429 GGTLC3B5MD39 225 aa17.99■□□□□ 0.47
HMGA2-208ENST00000537429 WFDC10AQ9H1F0 79 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms