RNA–Protein interactions for RNA: ENST00000536509.5

LMO3-214, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-214ENST00000536509 SHANK2-AS3Q9BTD1 123 aa7.75□□□□□ -1.17
LMO3-214ENST00000536509 SLC25A39Q9BZJ4 359 aaPredicted RBP7.75□□□□□ -1.17
LMO3-214ENST00000536509 Q9H8V8 135 aa7.75□□□□□ -1.17
LMO3-214ENST00000536509 CCDC59Q9P031 241 aaKnown RBP7.75□□□□□ -1.17
LMO3-214ENST00000536509 HIGD1AQ9Y241 93 aa7.75□□□□□ -1.17
LMO3-214ENST00000536509 TRAV12-2A0A075B6T6 113 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 A0A087X0K7 114 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 H3BNG1 76 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 H3BRN7 92 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 H7BYZ3 331 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 HYPMO75409 117 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 PRM2P04554 102 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 IL5P05113 134 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 AZU1P20160 251 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 CDKN1BP46527 198 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 AP3S2P59780 193 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 PLP1P60201 277 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 HIST1H1AQ02539 215 aaPredicted RBP7.74□□□□□ -1.17
LMO3-214ENST00000536509 FGL1Q08830 312 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 SPATA12Q7Z6I5 190 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 RNF182Q8N6D2 247 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 LRRC20Q8TCA0 184 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 DEDD2Q8WXF8 326 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 BCL7BQ9BQE9 202 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 UPK3BQ9BT76 320 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 Q9H3A6 140 aa7.74□□□□□ -1.17
LMO3-214ENST00000536509 STRAPQ9Y3F4 350 aaKnown RBP7.74□□□□□ -1.17
LMO3-214ENST00000536509 HSPG2P98160 4391 aa7.73□□□□□ -1.17
LMO3-214ENST00000536509 WRBO00258 174 aa7.73□□□□□ -1.17
LMO3-214ENST00000536509 CXCL2P19875 107 aa7.73□□□□□ -1.17
LMO3-214ENST00000536509 CXCL3P19876 107 aa7.73□□□□□ -1.17
LMO3-214ENST00000536509 M6PRP20645 277 aa7.73□□□□□ -1.17
LMO3-214ENST00000536509 GATA2P23769 480 aaPredicted RBP7.73□□□□□ -1.17
LMO3-214ENST00000536509 FCN2Q15485 313 aa7.73□□□□□ -1.17
LMO3-214ENST00000536509 PSG3Q16557 428 aa7.73□□□□□ -1.17
LMO3-214ENST00000536509 SPANXN5Q5MJ07 72 aa7.73□□□□□ -1.17
LMO3-214ENST00000536509 CYP2G1PQ6ZSU1 146 aa7.73□□□□□ -1.17
LMO3-214ENST00000536509 TMED4Q7Z7H5 227 aa7.73□□□□□ -1.17
LMO3-214ENST00000536509 RNASE8Q8TDE3 154 aaKnown RBP7.73□□□□□ -1.17
LMO3-214ENST00000536509 RAB2BQ8WUD1 216 aa7.73□□□□□ -1.17
LMO3-214ENST00000536509 GNPNAT1Q96EK6 184 aaPredicted RBP7.73□□□□□ -1.17
LMO3-214ENST00000536509 SLC25A21Q9BQT8 299 aaPredicted RBP7.73□□□□□ -1.17
LMO3-214ENST00000536509 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.73□□□□□ -1.17
LMO3-214ENST00000536509 FABP12A6NFH5 140 aa7.72□□□□□ -1.17
LMO3-214ENST00000536509 SMIM18P0DKX4 95 aa7.72□□□□□ -1.17
LMO3-214ENST00000536509 HTN1P15515 57 aa7.72□□□□□ -1.17
LMO3-214ENST00000536509 SPCS2Q15005 226 aa7.72□□□□□ -1.17
LMO3-214ENST00000536509 PXDC1Q5TGL8 231 aa7.72□□□□□ -1.17
LMO3-214ENST00000536509 IGFL4Q6B9Z1 124 aa7.72□□□□□ -1.17
LMO3-214ENST00000536509 TMEM182Q6ZP80 229 aaPredicted RBP7.72□□□□□ -1.17
LMO3-214ENST00000536509 ACOT7LQ6ZUV0 252 aa7.72□□□□□ -1.17
LMO3-214ENST00000536509 CCDC28AQ8IWP9 274 aa7.72□□□□□ -1.17
LMO3-214ENST00000536509 RXFP4Q8TDU9 374 aa7.72□□□□□ -1.17
LMO3-214ENST00000536509 MRPS26Q9BYN8 205 aaKnown RBP7.72□□□□□ -1.17
LMO3-214ENST00000536509 NOP10Q9NPE3 64 aaKnown RBP7.72□□□□□ -1.17
LMO3-214ENST00000536509 SCRT2Q9NQ03 307 aa7.72□□□□□ -1.17
LMO3-214ENST00000536509 ABCA13Q86UQ4 5058 aa7.72□□□□□ -1.17
LMO3-214ENST00000536509 TRAV26-1A0A087WT03 109 aa7.71□□□□□ -1.18
LMO3-214ENST00000536509 FNDC10F2Z333 226 aa7.71□□□□□ -1.18
LMO3-214ENST00000536509 OR5G3P0C626 314 aa7.71□□□□□ -1.18
LMO3-214ENST00000536509 LINC00869P0C866 280 aa7.71□□□□□ -1.18
LMO3-214ENST00000536509 OR5I1Q13606 314 aa7.71□□□□□ -1.18
LMO3-214ENST00000536509 C4orf46Q504U0 113 aa7.71□□□□□ -1.18
LMO3-214ENST00000536509 LCN15Q6UWW0 184 aa7.71□□□□□ -1.18
LMO3-214ENST00000536509 LINC00612Q8N6U2 182 aa7.71□□□□□ -1.18
LMO3-214ENST00000536509 DYNC2LI1Q8TCX1 351 aa7.71□□□□□ -1.18
LMO3-214ENST00000536509 RPUSD4Q96CM3 377 aaKnown RBP7.71□□□□□ -1.18
LMO3-214ENST00000536509 SOSTQ9BQB4 213 aa7.71□□□□□ -1.18
LMO3-214ENST00000536509 SLC50A1Q9BRV3 221 aa7.71□□□□□ -1.18
LMO3-214ENST00000536509 SMCO3A2RU48 225 aa7.7□□□□□ -1.18
LMO3-214ENST00000536509 K7EPK0 472 aa7.7□□□□□ -1.18
LMO3-214ENST00000536509 ZNF701M0R085 212 aaPredicted RBP7.7□□□□□ -1.18
LMO3-214ENST00000536509 SFT2D2O95562 160 aa7.7□□□□□ -1.18
LMO3-214ENST00000536509 RLN2P04090 185 aa7.7□□□□□ -1.18
LMO3-214ENST00000536509 ANXA7P20073 488 aaKnown RBP7.7□□□□□ -1.18
LMO3-214ENST00000536509 TNFSF8P32971 234 aa7.7□□□□□ -1.18
LMO3-214ENST00000536509 TMBIM6P55061 237 aa7.7□□□□□ -1.18
LMO3-214ENST00000536509 UBE2MP61081 183 aaKnown RBP7.7□□□□□ -1.18
LMO3-214ENST00000536509 DLK1P80370 383 aa7.7□□□□□ -1.18
LMO3-214ENST00000536509 CCDC190Q86UF4 302 aa7.7□□□□□ -1.18
LMO3-214ENST00000536509 TOMM5Q8N4H5 51 aa7.7□□□□□ -1.18
LMO3-214ENST00000536509 NPVFQ9HCQ7 196 aa7.7□□□□□ -1.18
LMO3-214ENST00000536509 MRPS16Q9Y3D3 137 aaKnown RBP7.7□□□□□ -1.18
LMO3-214ENST00000536509 PMS2P5A8MQ11 134 aa7.69□□□□□ -1.18
LMO3-214ENST00000536509 SNURFLB1AK76 121 aa7.69□□□□□ -1.18
LMO3-214ENST00000536509 H3BP45 60 aa7.69□□□□□ -1.18
LMO3-214ENST00000536509 HOXB5P09067 269 aa7.69□□□□□ -1.18
LMO3-214ENST00000536509 PPP1R1AQ13522 171 aa7.69□□□□□ -1.18
LMO3-214ENST00000536509 CT83Q5H943 113 aa7.69□□□□□ -1.18
LMO3-214ENST00000536509 UHRF2Q96PU4 802 aa7.69□□□□□ -1.18
LMO3-214ENST00000536509 ARL6Q9H0F7 186 aa7.69□□□□□ -1.18
LMO3-214ENST00000536509 ZNF331Q9NQX6 463 aaPredicted RBP7.69□□□□□ -1.18
LMO3-214ENST00000536509 PSENENQ9NZ42 101 aa7.69□□□□□ -1.18
LMO3-214ENST00000536509 PTTG2Q9NZH5 202 aa7.69□□□□□ -1.18
LMO3-214ENST00000536509 ESRGQ1W209 222 aa7.68□□□□□ -1.18
LMO3-214ENST00000536509 ZNF546Q86UE3 836 aa7.68□□□□□ -1.18
LMO3-214ENST00000536509 BPIFA4PQ86YQ2 179 aa7.68□□□□□ -1.18
LMO3-214ENST00000536509 MCFD2Q8NI22 146 aa7.68□□□□□ -1.18
LMO3-214ENST00000536509 TRIM63Q969Q1 353 aa7.68□□□□□ -1.18
LMO3-214ENST00000536509 SMIM8Q96KF7 97 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms