RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 C10orf113Q5VZT2 155 aa9.64□□□□□ -0.87
CHFR-210ENST00000535527 EIF4E3Q8N5X7 224 aaKnown RBP9.64□□□□□ -0.87
CHFR-210ENST00000535527 NARS2Q96I59 477 aaKnown RBP9.64□□□□□ -0.87
CHFR-210ENST00000535527 FAM110AQ9BQ89 295 aa9.64□□□□□ -0.87
CHFR-210ENST00000535527 SLC25A2Q9BXI2 301 aa9.64□□□□□ -0.87
CHFR-210ENST00000535527 PLA2G2EQ9NZK7 142 aa9.64□□□□□ -0.87
CHFR-210ENST00000535527 A0A087X0K7 114 aa9.63□□□□□ -0.87
CHFR-210ENST00000535527 HMSDA8MTL9 139 aa9.63□□□□□ -0.87
CHFR-210ENST00000535527 F6UB75 175 aa9.63□□□□□ -0.87
CHFR-210ENST00000535527 DNASE2O00115 360 aaPredicted RBP9.63□□□□□ -0.87
CHFR-210ENST00000535527 GIG44P09565 113 aaPredicted RBP9.63□□□□□ -0.87
CHFR-210ENST00000535527 PYYP10082 97 aa9.63□□□□□ -0.87
CHFR-210ENST00000535527 RPL35AP18077 110 aaKnown RBP9.63□□□□□ -0.87
CHFR-210ENST00000535527 ATP6V0CP27449 155 aa9.63□□□□□ -0.87
CHFR-210ENST00000535527 S100A12P80511 92 aa9.63□□□□□ -0.87
CHFR-210ENST00000535527 PSMG4Q5JS54 123 aa9.63□□□□□ -0.87
CHFR-210ENST00000535527 SSX7Q7RTT5 188 aa9.63□□□□□ -0.87
CHFR-210ENST00000535527 RNF182Q8N6D2 247 aa9.63□□□□□ -0.87
CHFR-210ENST00000535527 HSD17B11Q8NBQ5 300 aa9.63□□□□□ -0.87
CHFR-210ENST00000535527 TM2D3Q9BRN9 247 aa9.63□□□□□ -0.87
CHFR-210ENST00000535527 DNAJC4Q9NNZ3 241 aa9.63□□□□□ -0.87
CHFR-210ENST00000535527 FFAR4Q5NUL3 377 aa9.62□□□□□ -0.87
CHFR-210ENST00000535527 PXDC1Q5TGL8 231 aa9.62□□□□□ -0.87
CHFR-210ENST00000535527 ZNF586Q9NXT0 402 aa9.62□□□□□ -0.87
CHFR-210ENST00000535527 CD5P06127 495 aa9.61□□□□□ -0.87
CHFR-210ENST00000535527 ATF4P18848 351 aaPredicted RBP9.61□□□□□ -0.87
CHFR-210ENST00000535527 RAB31Q13636 194 aa9.61□□□□□ -0.87
CHFR-210ENST00000535527 TRPT1Q86TN4 253 aaKnown RBP9.61□□□□□ -0.87
CHFR-210ENST00000535527 KCNRGQ8N5I3 272 aa9.61□□□□□ -0.87
CHFR-210ENST00000535527 MFFQ9GZY8 342 aa9.61□□□□□ -0.87
CHFR-210ENST00000535527 ELOA3CA0A087WX78 387 aaPredicted RBP9.6□□□□□ -0.87
CHFR-210ENST00000535527 TEX46H3BTG2 121 aa9.6□□□□□ -0.87
CHFR-210ENST00000535527 NDUFB4O95168 129 aa9.6□□□□□ -0.87
CHFR-210ENST00000535527 IFNA5P01569 189 aa9.6□□□□□ -0.87
CHFR-210ENST00000535527 GALR1P47211 349 aa9.6□□□□□ -0.87
CHFR-210ENST00000535527 PAFAH1B2P68402 229 aa9.6□□□□□ -0.87
CHFR-210ENST00000535527 FLI1Q01543 452 aaPredicted RBP9.6□□□□□ -0.87
CHFR-210ENST00000535527 FAM78BQ5VT40 261 aa9.6□□□□□ -0.87
CHFR-210ENST00000535527 Q6ZRG5 221 aa9.6□□□□□ -0.87
CHFR-210ENST00000535527 OR1L4Q8NGR5 311 aa9.6□□□□□ -0.87
CHFR-210ENST00000535527 GATAD1Q8WUU5 269 aa9.6□□□□□ -0.87
CHFR-210ENST00000535527 SAT2Q96F10 170 aaPredicted RBP9.6□□□□□ -0.87
CHFR-210ENST00000535527 TUBA4BQ9H853 241 aa9.6□□□□□ -0.87
CHFR-210ENST00000535527 TIMM9Q9Y5J7 89 aa9.6□□□□□ -0.87
CHFR-210ENST00000535527 PRAC2D3DTV9 90 aa9.59□□□□□ -0.87
CHFR-210ENST00000535527 ZNF705DP0CH99 300 aaPredicted RBP9.59□□□□□ -0.87
CHFR-210ENST00000535527 ZNF705BP0CI00 300 aaPredicted RBP9.59□□□□□ -0.87
CHFR-210ENST00000535527 RPL7P18124 248 aaKnown RBP9.59□□□□□ -0.87
CHFR-210ENST00000535527 PSMB3P49720 205 aa9.59□□□□□ -0.87
CHFR-210ENST00000535527 ZNF345Q14585 488 aa9.59□□□□□ -0.87
CHFR-210ENST00000535527 ZNF726P1Q15940 193 aa9.59□□□□□ -0.87
CHFR-210ENST00000535527 LGALSLQ3ZCW2 172 aaPredicted RBP9.59□□□□□ -0.87
CHFR-210ENST00000535527 ACTL10Q5JWF8 245 aa9.59□□□□□ -0.87
CHFR-210ENST00000535527 OR2G3Q8NGZ4 309 aa9.59□□□□□ -0.87
CHFR-210ENST00000535527 FXYD5Q96DB9 178 aa9.59□□□□□ -0.87
CHFR-210ENST00000535527 PFDN5Q99471 154 aa9.59□□□□□ -0.87
CHFR-210ENST00000535527 ZNF331Q9NQX6 463 aaPredicted RBP9.59□□□□□ -0.87
CHFR-210ENST00000535527 CSMD3Q7Z407 3707 aa9.59□□□□□ -0.87
CHFR-210ENST00000535527 LOC102724200A0A096LPH7 203 aaPredicted RBP9.58□□□□□ -0.88
CHFR-210ENST00000535527 ISLRO14498 428 aa9.58□□□□□ -0.88
CHFR-210ENST00000535527 HMGB3O15347 200 aaKnown RBP9.58□□□□□ -0.88
CHFR-210ENST00000535527 UQCC3Q6UW78 93 aa9.58□□□□□ -0.88
CHFR-210ENST00000535527 RPP25LQ8N5L8 163 aaKnown RBP9.58□□□□□ -0.88
CHFR-210ENST00000535527 INO80EQ8NBZ0 244 aaPredicted RBP9.58□□□□□ -0.88
CHFR-210ENST00000535527 SCGB1C1Q8TD33 95 aa9.58□□□□□ -0.88
CHFR-210ENST00000535527 PHYHIPLQ96FC7 376 aa9.58□□□□□ -0.88
CHFR-210ENST00000535527 LINC00052Q96N35 136 aa9.58□□□□□ -0.88
CHFR-210ENST00000535527 GPR82Q96P67 336 aa9.58□□□□□ -0.88
CHFR-210ENST00000535527 RCHY1Q96PM5 261 aa9.58□□□□□ -0.88
CHFR-210ENST00000535527 FUT9Q9Y231 359 aa9.58□□□□□ -0.88
CHFR-210ENST00000535527 STARD9Q9P2P6 4700 aa9.58□□□□□ -0.88
CHFR-210ENST00000535527 A0A0D9SG52 128 aa9.57□□□□□ -0.88
CHFR-210ENST00000535527 A8MTW9 85 aa9.57□□□□□ -0.88
CHFR-210ENST00000535527 ZNF705FA8MVS1 300 aaPredicted RBP9.57□□□□□ -0.88
CHFR-210ENST00000535527 C17orf112F2Z3M2 114 aa9.57□□□□□ -0.88
CHFR-210ENST00000535527 H3BMM0 161 aa9.57□□□□□ -0.88
CHFR-210ENST00000535527 OR10J4P0C629 311 aa9.57□□□□□ -0.88
CHFR-210ENST00000535527 HLA-DRB4P13762 266 aa9.57□□□□□ -0.88
CHFR-210ENST00000535527 ZNF266Q14584 549 aa9.57□□□□□ -0.88
CHFR-210ENST00000535527 DEFB135Q30KP9 77 aa9.57□□□□□ -0.88
CHFR-210ENST00000535527 AMTNQ6UX39 209 aa9.57□□□□□ -0.88
CHFR-210ENST00000535527 ZNF709Q8N972 641 aa9.57□□□□□ -0.88
CHFR-210ENST00000535527 C16orf92Q96LL3 132 aa9.57□□□□□ -0.88
CHFR-210ENST00000535527 PSMG3Q9BT73 122 aaPredicted RBP9.57□□□□□ -0.88
CHFR-210ENST00000535527 SAV1Q9H4B6 383 aaPredicted RBP9.57□□□□□ -0.88
CHFR-210ENST00000535527 TMEM14CQ9P0S9 112 aa9.57□□□□□ -0.88
CHFR-210ENST00000535527 HLA-DRB4X5D2U9 266 aa9.57□□□□□ -0.88
CHFR-210ENST00000535527 TRBV19A0A075B6N1 114 aa9.56□□□□□ -0.88
CHFR-210ENST00000535527 A0A0J9YX75 114 aa9.56□□□□□ -0.88
CHFR-210ENST00000535527 M0R3E3 92 aa9.56□□□□□ -0.88
CHFR-210ENST00000535527 BCL2L11O43521 198 aa9.56□□□□□ -0.88
CHFR-210ENST00000535527 BPIFA4PQ86YQ2 179 aa9.56□□□□□ -0.88
CHFR-210ENST00000535527 OVOL2Q9BRP0 275 aa9.56□□□□□ -0.88
CHFR-210ENST00000535527 MRPL32Q9BYC8 188 aaKnown RBP9.56□□□□□ -0.88
CHFR-210ENST00000535527 HRH4Q9H3N8 390 aa9.56□□□□□ -0.88
CHFR-210ENST00000535527 KCNIP2Q9NS61 270 aa9.56□□□□□ -0.88
CHFR-210ENST00000535527 RPRMQ9NS64 109 aa9.56□□□□□ -0.88
CHFR-210ENST00000535527 IGKV3-20P01619 116 aa9.55□□□□□ -0.88
CHFR-210ENST00000535527 MEOX2P50222 304 aa9.55□□□□□ -0.88
CHFR-210ENST00000535527 FXYD7P58549 80 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms