RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 HIST1H2BKO60814 126 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 HIST1H2BJP06899 126 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 HIST1H2BOP23527 126 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 HIST1H2BBP33778 126 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 HIST1H2BDP58876 126 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 HIST1H2BCP62807 126 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 SS18Q15532 418 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 HIST2H2BEQ16778 126 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.29□□□□□ -0.76
SPG11-203ENST00000535302 AMN1Q8IY45 258 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 HIST1H2BHQ93079 126 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 HIST1H2BNQ99877 126 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 HIST1H2BMQ99879 126 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 hADV29S1A0JD25 119 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 SRRM5B3KS81 715 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 STPG4Q8N801 248 aa10.29□□□□□ -0.76
SPG11-203ENST00000535302 LOC105371267A0A1B0GV96 52 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 FAM90A2PQ658T7 463 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 NEGR1Q7Z3B1 354 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 TMEM256Q8N2U0 113 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.28□□□□□ -0.763e-6■■■■□ 25.4
SPG11-203ENST00000535302 TRAV26-2A0A0B4J265 109 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 TMEM238C9JI98 176 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 ZNF561-AS1K7EIQ3 104 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 OVOL1O14753 267 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 RBMY1FQ15415 496 aaKnown RBP10.28□□□□□ -0.76
SPG11-203ENST00000535302 ID3Q02535 119 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 H0YJW9 148 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 NDUFS8O00217 210 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 GAGE6Q13070 117 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 MORN5Q5VZ52 161 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 MDS2Q8NDY4 140 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 HS3ST6Q96QI5 342 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 IGKV1D-17A0A075B6S4 117 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 A0A087WWC5 75 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 BUB1B-PAK6H3BSN5 160 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 IGKV1-5P01602 117 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 CITED1Q99966 193 aa10.28□□□□□ -0.76
SPG11-203ENST00000535302 F2Z2F3 143 aa10.27□□□□□ -0.76
SPG11-203ENST00000535302 GHRHP01286 108 aa10.27□□□□□ -0.76
SPG11-203ENST00000535302 C20orf204Q6ZNR8 217 aa10.27□□□□□ -0.76
SPG11-203ENST00000535302 NUP35Q8NFH5 326 aa10.27□□□□□ -0.76
SPG11-203ENST00000535302 RASL10AQ92737 203 aa10.27□□□□□ -0.76
SPG11-203ENST00000535302 ABCA1O95477 2261 aa10.27□□□□□ -0.77
SPG11-203ENST00000535302 GAS1P54826 345 aa10.27□□□□□ -0.77
SPG11-203ENST00000535302 PAX9P55771 341 aa10.27□□□□□ -0.77
SPG11-203ENST00000535302 PMVKQ15126 192 aa10.27□□□□□ -0.77
SPG11-203ENST00000535302 SPTA1P02549 2419 aa10.27□□□□□ -0.77
SPG11-203ENST00000535302 A0A1B0GW15 77 aa10.27□□□□□ -0.77
SPG11-203ENST00000535302 GAGE12BA1L429 117 aa10.27□□□□□ -0.77
SPG11-203ENST00000535302 GAGE7O76087 117 aa10.27□□□□□ -0.77
SPG11-203ENST00000535302 GAGE12FP0CL80 117 aa10.27□□□□□ -0.77
SPG11-203ENST00000535302 GAGE12GP0CL81 117 aa10.27□□□□□ -0.77
SPG11-203ENST00000535302 GAGE12IP0CL82 117 aa10.27□□□□□ -0.77
SPG11-203ENST00000535302 SUPT4H1P63272 117 aaKnown RBP10.27□□□□□ -0.77
SPG11-203ENST00000535302 CHD3Q12873 2000 aaKnown RBP10.27□□□□□ -0.77
SPG11-203ENST00000535302 TEX38Q6PEX7 206 aa10.27□□□□□ -0.77
SPG11-203ENST00000535302 TSKUQ8WUA8 353 aa10.27□□□□□ -0.77
SPG11-203ENST00000535302 SPOCK3Q9BQ16 436 aa10.27□□□□□ -0.77
SPG11-203ENST00000535302 KLF12Q9Y4X4 402 aa10.27□□□□□ -0.77
SPG11-203ENST00000535302 RASL11AQ6T310 242 aa10.26□□□□□ -0.77
SPG11-203ENST00000535302 IGFBPL1Q8WX77 278 aa10.26□□□□□ -0.77
SPG11-203ENST00000535302 TIMM21Q9BVV7 248 aa10.26□□□□□ -0.77
SPG11-203ENST00000535302 GNB1LQ9BYB4 327 aa10.26□□□□□ -0.77
SPG11-203ENST00000535302 HAMPP81172 84 aa10.26□□□□□ -0.77
SPG11-203ENST00000535302 C5orf47Q569G3 176 aa10.26□□□□□ -0.77
SPG11-203ENST00000535302 SLC25A48Q6ZT89 311 aaKnown RBP10.26□□□□□ -0.77
SPG11-203ENST00000535302 WDR83OSQ9Y284 106 aa10.26□□□□□ -0.77
SPG11-203ENST00000535302 TINCRA0A1B0GVN0 87 aa10.26□□□□□ -0.77
SPG11-203ENST00000535302 NKAPP1Q8N9T2 125 aa10.26□□□□□ -0.77
SPG11-203ENST00000535302 MYLKQ15746 1914 aa10.26□□□□□ -0.77
SPG11-203ENST00000535302 NTF4P34130 210 aa10.25□□□□□ -0.77
SPG11-203ENST00000535302 HEPN1Q6WQI6 88 aa10.25□□□□□ -0.77
SPG11-203ENST00000535302 COL6A6A6NMZ7 2263 aa10.25□□□□□ -0.77
SPG11-203ENST00000535302 DLX4Q92988 240 aaPredicted RBP10.25□□□□□ -0.77
SPG11-203ENST00000535302 DAD1P61803 113 aa10.25□□□□□ -0.77
SPG11-203ENST00000535302 B4DSR2 109 aa10.25□□□□□ -0.77
SPG11-203ENST00000535302 E7EQL1 145 aa10.25□□□□□ -0.77
SPG11-203ENST00000535302 SAA4P35542 130 aa10.25□□□□□ -0.77
SPG11-203ENST00000535302 B3GALT5-AS1P59052 145 aa10.25□□□□□ -0.77
SPG11-203ENST00000535302 HSD52Q0P140 79 aa10.25□□□□□ -0.77
SPG11-203ENST00000535302 DUX4L9Q6RFH8 374 aaPredicted RBP10.25□□□□□ -0.77
SPG11-203ENST00000535302 HIST1H2BLQ99880 126 aa10.25□□□□□ -0.77
SPG11-203ENST00000535302 IGKV1-16P04430 117 aa10.25□□□□□ -0.77
SPG11-203ENST00000535302 SP5Q6BEB4 398 aaPredicted RBP10.25□□□□□ -0.77
SPG11-203ENST00000535302 Q96MF0 132 aa10.25□□□□□ -0.77
SPG11-203ENST00000535302 Q9HAA7 133 aa10.25□□□□□ -0.77
SPG11-203ENST00000535302 ABCA4P78363 2273 aa10.25□□□□□ -0.77
SPG11-203ENST00000535302 A0A1B0GUS0 222 aa10.25□□□□□ -0.77
SPG11-203ENST00000535302 CD5LO43866 347 aa10.25□□□□□ -0.77
SPG11-203ENST00000535302 KIR3DS1Q14943 382 aa10.25□□□□□ -0.77
SPG11-203ENST00000535302 OSTCQ9NRP0 149 aa10.25□□□□□ -0.77
SPG11-203ENST00000535302 GBF1Q92538 1859 aa10.24□□□□□ -0.77
SPG11-203ENST00000535302 CHCHD1Q96BP2 118 aaKnown RBP10.24□□□□□ -0.77
SPG11-203ENST00000535302 OVOL3O00110 214 aa10.24□□□□□ -0.77
SPG11-203ENST00000535302 SRSF8Q9BRL6 282 aaKnown RBP10.24□□□□□ -0.77
SPG11-203ENST00000535302 A0A0G2JRQ6 117 aa10.24□□□□□ -0.77
SPG11-203ENST00000535302 CFHR2P36980 270 aa10.24□□□□□ -0.77
SPG11-203ENST00000535302 Q6P435 159 aa10.24□□□□□ -0.77
SPG11-203ENST00000535302 H3BMM0 161 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms