RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 PDCD11Q14690 1871 aaKnown RBP14.71□□□□□ -0.05
SFSWAP-203ENST00000535236 C15orf62A8K5M9 175 aa14.71□□□□□ -0.05
SFSWAP-203ENST00000535236 ZNF562Q6V9R5 426 aa14.71□□□□□ -0.05
SFSWAP-203ENST00000535236 TRPT1Q86TN4 253 aaKnown RBP14.71□□□□□ -0.05
SFSWAP-203ENST00000535236 CACNA1GO43497 2377 aa14.71□□□□□ -0.05
SFSWAP-203ENST00000535236 VWC2LB2RUY7 222 aa14.71□□□□□ -0.06
SFSWAP-203ENST00000535236 IGKV1-16P04430 117 aa14.71□□□□□ -0.06
SFSWAP-203ENST00000535236 GATA4P43694 442 aa14.71□□□□□ -0.06
SFSWAP-203ENST00000535236 GUSBP1Q15486 140 aa14.71□□□□□ -0.06
SFSWAP-203ENST00000535236 IL17RELQ6ZVW7 336 aa14.71□□□□□ -0.06
SFSWAP-203ENST00000535236 SPXQ9BT56 116 aa14.7□□□□□ -0.06
SFSWAP-203ENST00000535236 ZNF561-AS1K7EIQ3 104 aa14.7□□□□□ -0.06
SFSWAP-203ENST00000535236 DKK1O94907 266 aa14.7□□□□□ -0.06
SFSWAP-203ENST00000535236 SSBP2P81877 361 aaPredicted RBP14.7□□□□□ -0.06
SFSWAP-203ENST00000535236 Q86TA4 180 aa14.7□□□□□ -0.06
SFSWAP-203ENST00000535236 SMKR1H3BMG3 65 aa14.69□□□□□ -0.06
SFSWAP-203ENST00000535236 CFHR3Q02985 330 aa14.69□□□□□ -0.06
SFSWAP-203ENST00000535236 J3QKU1 62 aa14.69□□□□□ -0.06
SFSWAP-203ENST00000535236 ARMS2P0C7Q2 107 aa14.69□□□□□ -0.06
SFSWAP-203ENST00000535236 PDE6HQ13956 83 aa14.69□□□□□ -0.06
SFSWAP-203ENST00000535236 MLANAQ16655 118 aa14.69□□□□□ -0.06
SFSWAP-203ENST00000535236 KLF12Q9Y4X4 402 aa14.69□□□□□ -0.06
SFSWAP-203ENST00000535236 A0A0G2JMZ2 1700 aa14.69□□□□□ -0.06
SFSWAP-203ENST00000535236 LRRC37A2A6NM11 1700 aa14.69□□□□□ -0.06
SFSWAP-203ENST00000535236 GAGE12JA6NER3 117 aa14.69□□□□□ -0.06
SFSWAP-203ENST00000535236 FNDC10F2Z333 226 aa14.69□□□□□ -0.06
SFSWAP-203ENST00000535236 GAGE1Q13065 139 aa14.69□□□□□ -0.06
SFSWAP-203ENST00000535236 GAGE4Q13068 117 aa14.69□□□□□ -0.06
SFSWAP-203ENST00000535236 GAGE5Q13069 117 aa14.69□□□□□ -0.06
SFSWAP-203ENST00000535236 FOXL2NBQ6ZUU3 175 aa14.69□□□□□ -0.06
SFSWAP-203ENST00000535236 RNF144BQ7Z419 303 aa14.69□□□□□ -0.06
SFSWAP-203ENST00000535236 KNCNA6PVL3 124 aa14.68□□□□□ -0.06
SFSWAP-203ENST00000535236 RPL32P62910 135 aaKnown RBP14.68□□□□□ -0.06
SFSWAP-203ENST00000535236 A0A1W2PPI3 338 aa14.68□□□□□ -0.06
SFSWAP-203ENST00000535236 GAGE2EQ4V326 116 aa14.68□□□□□ -0.06
SFSWAP-203ENST00000535236 Q6ZS49 121 aa14.68□□□□□ -0.06
SFSWAP-203ENST00000535236 AMN1Q8IY45 258 aa14.68□□□□□ -0.06
SFSWAP-203ENST00000535236 GAGE2DQ9UEU5 116 aa14.68□□□□□ -0.06
SFSWAP-203ENST00000535236 CR1LQ2VPA4 569 aa14.68□□□□□ -0.06
SFSWAP-203ENST00000535236 C2orf82Q6UX34 121 aa14.68□□□□□ -0.06
SFSWAP-203ENST00000535236 CEP250Q9BV73 2442 aa14.68□□□□□ -0.06
SFSWAP-203ENST00000535236 E9PQ18 207 aa14.68□□□□□ -0.06
SFSWAP-203ENST00000535236 RHODO00212 210 aa14.68□□□□□ -0.06
SFSWAP-203ENST00000535236 DNAJC30Q96LL9 226 aa14.68□□□□□ -0.06
SFSWAP-203ENST00000535236 ZNF581Q9P0T4 197 aa14.68□□□□□ -0.06
SFSWAP-203ENST00000535236 UBE2CO00762 179 aa14.67□□□□□ -0.06
SFSWAP-203ENST00000535236 HIST3H2BBQ8N257 126 aa14.67□□□□□ -0.06
SFSWAP-203ENST00000535236 GREB1LQ9C091 1923 aaPredicted RBP14.67□□□□□ -0.06
SFSWAP-203ENST00000535236 SIGMAR1Q99720 223 aa14.67□□□□□ -0.06
SFSWAP-203ENST00000535236 SPINK13Q1W4C9 94 aa14.67□□□□□ -0.06
SFSWAP-203ENST00000535236 ZNF625Q96I27 306 aaPredicted RBP14.67□□□□□ -0.06
SFSWAP-203ENST00000535236 IGHV2-70DA0A0C4DH43 119 aa14.66□□□□□ -0.06
SFSWAP-203ENST00000535236 NYNRINQ9P2P1 1898 aaKnown RBP14.66□□□□□ -0.06
SFSWAP-203ENST00000535236 NDUFB8O95169 186 aa14.66□□□□□ -0.06
SFSWAP-203ENST00000535236 hDV102S1A0JD36 115 aa14.66□□□□□ -0.06
SFSWAP-203ENST00000535236 QRFPP83859 136 aa14.66□□□□□ -0.06
SFSWAP-203ENST00000535236 ZNF48Q96MX3 618 aaPredicted RBP14.66□□□□□ -0.06
SFSWAP-203ENST00000535236 DOCK6Q96HP0 2047 aa14.66□□□□□ -0.06
SFSWAP-203ENST00000535236 TRBV25-1A0A075B6N4 114 aa14.66□□□□□ -0.06
SFSWAP-203ENST00000535236 MST1LQ2TV78 715 aa14.66□□□□□ -0.06
SFSWAP-203ENST00000535236 HAPLN4Q86UW8 402 aa14.66□□□□□ -0.06
SFSWAP-203ENST00000535236 ZNRD1Q9P1U0 126 aa14.66□□□□□ -0.06
SFSWAP-203ENST00000535236 APOC4P55056 127 aa14.65□□□□□ -0.06
SFSWAP-203ENST00000535236 MCRIP2Q9BUT9 160 aaKnown RBP14.65□□□□□ -0.06
SFSWAP-203ENST00000535236 Q71RC1 249 aaPredicted RBP14.65□□□□□ -0.06
SFSWAP-203ENST00000535236 NAA38Q9BRA0 125 aaKnown RBP14.65□□□□□ -0.06
SFSWAP-203ENST00000535236 TRAV8-3A0A0A6YYJ7 113 aa14.65□□□□□ -0.06
SFSWAP-203ENST00000535236 GREB1Q4ZG55 1949 aa14.65□□□□□ -0.06
SFSWAP-203ENST00000535236 KLK9Q9UKQ9 250 aa14.64□□□□□ -0.07
SFSWAP-203ENST00000535236 IGHV3-16A0A0C4DH30 117 aa14.64□□□□□ -0.07
SFSWAP-203ENST00000535236 ZC2HC1BQ5TFG8 222 aa14.64□□□□□ -0.07
SFSWAP-203ENST00000535236 WNK3Q9BYP7 1800 aa14.64□□□□□ -0.07
SFSWAP-203ENST00000535236 A0A0G2JRQ6 117 aa14.64□□□□□ -0.07
SFSWAP-203ENST00000535236 AZU1P20160 251 aa14.64□□□□□ -0.07
SFSWAP-203ENST00000535236 EREGO14944 169 aa14.64□□□□□ -0.07
SFSWAP-203ENST00000535236 Q8TCH9 128 aa14.64□□□□□ -0.07
SFSWAP-203ENST00000535236 GFRA4Q9GZZ7 299 aa14.64□□□□□ -0.07
SFSWAP-203ENST00000535236 KIF26BQ2KJY2 2108 aa14.64□□□□□ -0.07
SFSWAP-203ENST00000535236 LCTP09848 1927 aa14.64□□□□□ -0.07
SFSWAP-203ENST00000535236 J3QLI3 93 aa14.63□□□□□ -0.07
SFSWAP-203ENST00000535236 YPEL3P61236 119 aaPredicted RBP14.63□□□□□ -0.07
SFSWAP-203ENST00000535236 TNFRSF6BO95407 300 aa14.63□□□□□ -0.07
SFSWAP-203ENST00000535236 CGB3P0DN86 165 aa14.63□□□□□ -0.07
SFSWAP-203ENST00000535236 CFHR2P36980 270 aa14.63□□□□□ -0.07
SFSWAP-203ENST00000535236 C1orf122Q6ZSJ8 110 aa14.63□□□□□ -0.07
SFSWAP-203ENST00000535236 G3V318 75 aa14.63□□□□□ -0.07
SFSWAP-203ENST00000535236 ESDP10768 282 aa14.63□□□□□ -0.07
SFSWAP-203ENST00000535236 TMEM75Q8N9X5 138 aa14.63□□□□□ -0.07
SFSWAP-203ENST00000535236 GAGE2BQ13066 116 aa14.63□□□□□ -0.07
SFSWAP-203ENST00000535236 NKAPP1Q8N9T2 125 aa14.63□□□□□ -0.07
SFSWAP-203ENST00000535236 SYS1-DBNDD2H3BUS1 97 aa14.63□□□□□ -0.07
SFSWAP-203ENST00000535236 MRPL27Q9P0M9 148 aaKnown RBP14.63□□□□□ -0.07
SFSWAP-203ENST00000535236 SIPA1L1O43166 1804 aa14.62□□□□□ -0.07
SFSWAP-203ENST00000535236 DLX4Q92988 240 aaPredicted RBP14.62□□□□□ -0.07
SFSWAP-203ENST00000535236 TMEM126AQ9H061 195 aa14.62□□□□□ -0.07
SFSWAP-203ENST00000535236 CACNA1DQ01668 2161 aa14.62□□□□□ -0.07
SFSWAP-203ENST00000535236 SNHG12Q9BXW3 62 aa14.62□□□□□ -0.07
SFSWAP-203ENST00000535236 GAGE12BA1L429 117 aa14.62□□□□□ -0.07
SFSWAP-203ENST00000535236 GAGE7O76087 117 aa14.62□□□□□ -0.07
SFSWAP-203ENST00000535236 GAGE12FP0CL80 117 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms