RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 COL7A1Q02388 2944 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 FAM223BA6NKX1 122 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 SCGB1D2O95969 90 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 IFNA5P01569 189 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 IGLV1-51P01701 117 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 FRMD6-AS1P0C7T7 363 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 SLC25A6P12236 298 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 FXYD4P59646 89 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 RPL23P62829 140 aaKnown RBP6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 EIF4EBP1Q13541 118 aaPredicted RBP6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 KLF5Q13887 457 aaPredicted RBP6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 MSMO1Q15800 293 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 PMCHL1Q16048 86 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 BATFQ16520 125 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 RNF151Q2KHN1 245 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 FAM223AQ8IWN6 122 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 TMEM252Q8N6L7 170 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 VSTM2AQ8TAG5 236 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 IL22RA2Q969J5 263 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 CCL28Q9NRJ3 127 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 GNG13Q9P2W3 67 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 SMPXQ9UHP9 88 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 TIMM9Q9Y5J7 89 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 TRAPPC1Q9Y5R8 145 aa6.52□□□□□ -1.37
SFSWAP-202ENST00000535202 IGSF23A1L1A6 192 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 HYPMO75409 117 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 OR2J3O76001 311 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 KRASP01116 189 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 PPYP01298 95 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 PI3P19957 117 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 KIR2DS2P43631 304 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 NKX2-1P43699 371 aaPredicted RBP6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 RPL27AP46776 148 aaKnown RBP6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 TFPI2P48307 235 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 BRWD1-AS2P59051 145 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 MEF2BQ02080 365 aaPredicted RBP6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 ATP5G2Q06055 141 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 ADIRFQ15847 76 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 PRR27Q6MZM9 219 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 C19orf35Q6ZS72 473 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 TTC9CQ8N5M4 171 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 TMEM167AQ8TBQ9 72 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 TMEM56Q96MV1 263 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 RCHY1Q96PM5 261 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 TXN2Q99757 166 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 TXNDC17Q9BRA2 123 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 ZNF257Q9Y2Q1 563 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 PAM16Q9Y3D7 125 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 TMEM56-RWDD3S4R434 201 aa6.51□□□□□ -1.37
SFSWAP-202ENST00000535202 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 IGLC7A0M8Q6 106 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 TEX22C9J3V5 150 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 C17orf112F2Z3M2 114 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 H0Y980 276 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 BMPR1BO00238 502 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 CSN3P07498 182 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 IGHV4-30-4P0DP06 118 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 MYOD1P15172 320 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 TSPOP30536 169 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 PSMB3P49720 205 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 PIGPP57054 158 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 HERV-K104P61576 105 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 CATR1Q13166 79 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 C15orf32Q32M92 178 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 SPATA45Q537H7 98 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 Q6ZN92 141 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 NIT1Q86X76 327 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 TMEM217Q8N7C4 229 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 NECAP1Q8NC96 275 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 ZBTB34Q8NCN2 500 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 ZMAT4Q9H898 229 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 PRR13Q9NZ81 148 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 PEMTQ9UBM1 199 aa6.5□□□□□ -1.37
SFSWAP-202ENST00000535202 KMT2CQ8NEZ4 4911 aaKnown RBP6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 NPIPB5A8MRT5 1133 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 CEBPZOSA8MTT3 80 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 DIRC3C9JPN6 131 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 E7EUB6 86 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 CORTO00230 105 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 ZNF253O75346 499 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 IGHV3-23P01764 117 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 MT-ND6P03923 174 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 AREGP15514 252 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 FGF8P55075 233 aaPredicted RBP6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 RPL8P62917 257 aaKnown RBP6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 ID3Q02535 119 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 OR10J3Q5JRS4 329 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 OR4A47Q6IF82 309 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 LCN12Q6JVE5 192 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 ZNF818PQ6ZRF7 136 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 LYZL2Q7Z4W2 148 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 GTSCR1Q86UQ5 136 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 Q8N1Y9 231 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 TMEM256Q8N2U0 113 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 Q8N976 141 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 OR5C1Q8NGR4 320 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 OR51H1Q8NH63 302 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 OR4A5Q8NH83 315 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 SCGB1C1Q8TD33 95 aa6.49□□□□□ -1.37
SFSWAP-202ENST00000535202 DYNLRB2Q8TF09 96 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms