RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 EBLN2Q6P2I7 272 aa15.48■□□□□ 0.07
PKP3-211ENST00000534401 SAT2Q96F10 170 aaPredicted RBP15.48■□□□□ 0.07
PKP3-211ENST00000534401 ATP5SQ99766 215 aa15.48■□□□□ 0.07
PKP3-211ENST00000534401 HRH4Q9H3N8 390 aa15.48■□□□□ 0.07
PKP3-211ENST00000534401 ZNF331Q9NQX6 463 aaPredicted RBP15.48■□□□□ 0.07
PKP3-211ENST00000534401 PSG3Q16557 428 aa15.47■□□□□ 0.07
PKP3-211ENST00000534401 RGS21Q2M5E4 152 aa15.47■□□□□ 0.07
PKP3-211ENST00000534401 LCN15Q6UWW0 184 aa15.47■□□□□ 0.07
PKP3-211ENST00000534401 ZNF705AQ6ZN79 300 aaPredicted RBP15.47■□□□□ 0.07
PKP3-211ENST00000534401 RNF182Q8N6D2 247 aa15.47■□□□□ 0.07
PKP3-211ENST00000534401 THAP6Q8TBB0 222 aa15.47■□□□□ 0.07
PKP3-211ENST00000534401 ASB13Q8WXK3 278 aa15.47■□□□□ 0.07
PKP3-211ENST00000534401 PARD6GQ9BYG4 376 aaPredicted RBP15.47■□□□□ 0.07
PKP3-211ENST00000534401 TRAV5A0A0B4J249 113 aa15.46■□□□□ 0.07
PKP3-211ENST00000534401 H3BQ15 152 aa15.46■□□□□ 0.07
PKP3-211ENST00000534401 MIFP14174 115 aa15.46■□□□□ 0.07
PKP3-211ENST00000534401 PSG9Q00887 426 aa15.46■□□□□ 0.07
PKP3-211ENST00000534401 SLC50A1Q9BRV3 221 aa15.46■□□□□ 0.07
PKP3-211ENST00000534401 CLEC5AQ9NY25 188 aa15.46■□□□□ 0.07
PKP3-211ENST00000534401 TMEM14CQ9P0S9 112 aa15.46■□□□□ 0.07
PKP3-211ENST00000534401 XCL2Q9UBD3 114 aa15.46■□□□□ 0.07
PKP3-211ENST00000534401 RBMY1A1P0DJD3 496 aaKnown RBP15.45■□□□□ 0.06
PKP3-211ENST00000534401 RBMY1CP0DJD4 496 aa15.45■□□□□ 0.06
PKP3-211ENST00000534401 FGL1Q08830 312 aa15.45■□□□□ 0.06
PKP3-211ENST00000534401 RBMY1FQ15415 496 aaKnown RBP15.45■□□□□ 0.06
PKP3-211ENST00000534401 NEU1Q99519 415 aa15.45■□□□□ 0.06
PKP3-211ENST00000534401 ZNF705FA8MVS1 300 aaPredicted RBP15.44■□□□□ 0.06
PKP3-211ENST00000534401 ZNF253O75346 499 aa15.44■□□□□ 0.06
PKP3-211ENST00000534401 DUSP14O95147 198 aaKnown RBP15.44■□□□□ 0.06
PKP3-211ENST00000534401 GIPP09681 153 aaPredicted RBP15.44■□□□□ 0.06
PKP3-211ENST00000534401 ZNF705DP0CH99 300 aaPredicted RBP15.44■□□□□ 0.06
PKP3-211ENST00000534401 ZNF705BP0CI00 300 aaPredicted RBP15.44■□□□□ 0.06
PKP3-211ENST00000534401 HLA-DMBP28068 263 aa15.44■□□□□ 0.06
PKP3-211ENST00000534401 GUK1Q16774 197 aa15.44■□□□□ 0.06
PKP3-211ENST00000534401 GCSAMLQ5JQS6 135 aa15.44■□□□□ 0.06
PKP3-211ENST00000534401 OR4B1Q8NGF8 309 aa15.44■□□□□ 0.06
PKP3-211ENST00000534401 SLC35B3Q9H1N7 401 aa15.44■□□□□ 0.06
PKP3-211ENST00000534401 WFDC1Q9HC57 220 aa15.44■□□□□ 0.06
PKP3-211ENST00000534401 KCNIP2Q9NS61 270 aa15.44■□□□□ 0.06
PKP3-211ENST00000534401 LYSTQ99698 3801 aa15.43■□□□□ 0.06
PKP3-211ENST00000534401 IGKV3-20P01619 116 aa15.43■□□□□ 0.06
PKP3-211ENST00000534401 CNN1P51911 297 aaKnown RBP15.43■□□□□ 0.06
PKP3-211ENST00000534401 FAM167A-AS1Q96KT0 104 aa15.43■□□□□ 0.06
PKP3-211ENST00000534401 IGHV4-28A0A0C4DH34 117 aa15.42■□□□□ 0.06
PKP3-211ENST00000534401 SLC17A3O00476 420 aa15.42■□□□□ 0.06
PKP3-211ENST00000534401 Q5BKY6 102 aa15.42■□□□□ 0.06
PKP3-211ENST00000534401 OR8A1Q8NGG7 326 aa15.42■□□□□ 0.06
PKP3-211ENST00000534401 ZNF586Q9NXT0 402 aa15.42■□□□□ 0.06
PKP3-211ENST00000534401 ZNF738Q8NE65 137 aa15.41■□□□□ 0.06
PKP3-211ENST00000534401 LRRC20Q8TCA0 184 aa15.41■□□□□ 0.06
PKP3-211ENST00000534401 AQP10Q96PS8 301 aa15.41■□□□□ 0.06
PKP3-211ENST00000534401 SMIM9A6NGZ8 99 aa15.4■□□□□ 0.06
PKP3-211ENST00000534401 C17orf112F2Z3M2 114 aa15.4■□□□□ 0.06
PKP3-211ENST00000534401 AMBPP02760 352 aa15.4■□□□□ 0.06
PKP3-211ENST00000534401 HIST1H1EP10412 219 aaKnown RBP15.4■□□□□ 0.06
PKP3-211ENST00000534401 FXYD7P58549 80 aa15.4■□□□□ 0.06
PKP3-211ENST00000534401 C1orf158Q8N1D5 194 aa15.4■□□□□ 0.06
PKP3-211ENST00000534401 RPUSD4Q96CM3 377 aaKnown RBP15.4■□□□□ 0.06
PKP3-211ENST00000534401 TRBV19A0A075B6N1 114 aa15.39■□□□□ 0.05
PKP3-211ENST00000534401 CRXO43186 299 aaPredicted RBP15.39■□□□□ 0.05
PKP3-211ENST00000534401 NDUFB4O95168 129 aa15.39■□□□□ 0.05
PKP3-211ENST00000534401 IFNA5P01569 189 aa15.39■□□□□ 0.05
PKP3-211ENST00000534401 SNRPCP09234 159 aaKnown RBP15.39■□□□□ 0.05
PKP3-211ENST00000534401 PDE6HQ13956 83 aa15.39■□□□□ 0.05
PKP3-211ENST00000534401 IGF2BP2-AS1Q96M15 143 aa15.39■□□□□ 0.05
PKP3-211ENST00000534401 SLC25A2Q9BXI2 301 aa15.39■□□□□ 0.05
PKP3-211ENST00000534401 MRPL32Q9BYC8 188 aaKnown RBP15.39■□□□□ 0.05
PKP3-211ENST00000534401 SMIM3Q9BZL3 60 aa15.39■□□□□ 0.05
PKP3-211ENST00000534401 MFFQ9GZY8 342 aa15.39■□□□□ 0.05
PKP3-211ENST00000534401 LCE6AA0A183 80 aa15.38■□□□□ 0.05
PKP3-211ENST00000534401 H3BTX0 84 aa15.38■□□□□ 0.05
PKP3-211ENST00000534401 DEFB4AO15263 64 aa15.38■□□□□ 0.05
PKP3-211ENST00000534401 CEMP1Q6PRD7 247 aaPredicted RBP15.38■□□□□ 0.05
PKP3-211ENST00000534401 MIR17HGQ75NE6 70 aa15.38■□□□□ 0.05
PKP3-211ENST00000534401 C11orf45Q8TAV5 145 aa15.38■□□□□ 0.05
PKP3-211ENST00000534401 G3V3Q6 166 aa15.37■□□□□ 0.05
PKP3-211ENST00000534401 SCGB1C1Q8TD33 95 aa15.37■□□□□ 0.05
PKP3-211ENST00000534401 MRPL53Q96EL3 112 aaKnown RBP15.37■□□□□ 0.05
PKP3-211ENST00000534401 FUT9Q9Y231 359 aa15.37■□□□□ 0.05
PKP3-211ENST00000534401 SACSQ9NZJ4 4579 aa15.36■□□□□ 0.05
PKP3-211ENST00000534401 NUPR2A6NF83 97 aa15.36■□□□□ 0.05
PKP3-211ENST00000534401 PRAC2D3DTV9 90 aa15.36■□□□□ 0.05
PKP3-211ENST00000534401 PYYP10082 97 aa15.36■□□□□ 0.05
PKP3-211ENST00000534401 TIMM9Q9Y5J7 89 aa15.36■□□□□ 0.05
PKP3-211ENST00000534401 PLECQ15149 4684 aaKnown RBP15.35■□□□□ 0.05
PKP3-211ENST00000534401 CXorf65A6NEN9 183 aa15.35■□□□□ 0.05
PKP3-211ENST00000534401 NANOS2P60321 138 aaKnown RBP15.35■□□□□ 0.05
PKP3-211ENST00000534401 HIST1H1AQ02539 215 aaPredicted RBP15.35■□□□□ 0.05
PKP3-211ENST00000534401 FFAR4Q5NUL3 377 aa15.35■□□□□ 0.05
PKP3-211ENST00000534401 PHLDA1Q8WV24 401 aaPredicted RBP15.35■□□□□ 0.05
PKP3-211ENST00000534401 ZNF503Q96F45 646 aa15.35■□□□□ 0.05
PKP3-211ENST00000534401 RFNGQ9Y644 331 aa15.35■□□□□ 0.05
PKP3-211ENST00000534401 RNF222A6NCQ9 220 aa15.34■□□□□ 0.05
PKP3-211ENST00000534401 BOLA2-SMG1P6H3BVE0 249 aa15.34■□□□□ 0.05
PKP3-211ENST00000534401 PMS2P11Q13670 270 aa15.34■□□□□ 0.05
PKP3-211ENST00000534401 FXYD5Q96DB9 178 aa15.34■□□□□ 0.05
PKP3-211ENST00000534401 OR51M1Q9H341 326 aa15.34■□□□□ 0.05
PKP3-211ENST00000534401 PRELID1Q9Y255 219 aa15.34■□□□□ 0.05
PKP3-211ENST00000534401 GOLT1BQ9Y3E0 138 aa15.34■□□□□ 0.05
PKP3-211ENST00000534401 M0R2Z0 102 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms