RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 MAP6D1Q9H9H5 199 aa11.62□□□□□ -0.55
CTTN-215ENST00000533931 CTXND1A0A1B0GTU2 59 aa11.61□□□□□ -0.55
CTTN-215ENST00000533931 CD7P09564 240 aa11.61□□□□□ -0.55
CTTN-215ENST00000533931 RAB24Q969Q5 203 aa11.61□□□□□ -0.55
CTTN-215ENST00000533931 PAXXQ9BUH6 204 aa11.61□□□□□ -0.55
CTTN-215ENST00000533931 TRBV19A0A075B6N1 114 aa11.6□□□□□ -0.55
CTTN-215ENST00000533931 H3BQ15 152 aa11.6□□□□□ -0.55
CTTN-215ENST00000533931 OR7C2O60412 319 aa11.6□□□□□ -0.55
CTTN-215ENST00000533931 NKX2-5P52952 324 aaPredicted RBP11.6□□□□□ -0.55
CTTN-215ENST00000533931 WFDC3Q8IUB2 231 aa11.6□□□□□ -0.55
CTTN-215ENST00000533931 RNF141Q8WVD5 230 aa11.6□□□□□ -0.55
CTTN-215ENST00000533931 TMED6Q8WW62 240 aa11.6□□□□□ -0.55
CTTN-215ENST00000533931 FXYD5Q96DB9 178 aa11.6□□□□□ -0.55
CTTN-215ENST00000533931 SAT2Q96F10 170 aaPredicted RBP11.6□□□□□ -0.55
CTTN-215ENST00000533931 C16orf92Q96LL3 132 aa11.6□□□□□ -0.55
CTTN-215ENST00000533931 ZNF331Q9NQX6 463 aaPredicted RBP11.6□□□□□ -0.55
CTTN-215ENST00000533931 K7EIL1 84 aa11.59□□□□□ -0.55
CTTN-215ENST00000533931 CXorf1O96002 111 aa11.59□□□□□ -0.55
CTTN-215ENST00000533931 NBEAP1P0C6P0 100 aa11.59□□□□□ -0.55
CTTN-215ENST00000533931 ZNF688P0C7X2 276 aa11.59□□□□□ -0.55
CTTN-215ENST00000533931 UBE2L3P68036 154 aaKnown RBP11.59□□□□□ -0.55
CTTN-215ENST00000533931 PSG9Q00887 426 aa11.59□□□□□ -0.55
CTTN-215ENST00000533931 LYPD1Q8N2G4 141 aa11.59□□□□□ -0.55
CTTN-215ENST00000533931 SUN5Q8TC36 379 aa11.59□□□□□ -0.55
CTTN-215ENST00000533931 ZNF503Q96F45 646 aa11.59□□□□□ -0.55
CTTN-215ENST00000533931 ZNF586Q9NXT0 402 aa11.59□□□□□ -0.55
CTTN-215ENST00000533931 SORL1Q92673 2214 aa11.59□□□□□ -0.55
CTTN-215ENST00000533931 TRAV8-2A0A0B4J237 113 aa11.58□□□□□ -0.56
CTTN-215ENST00000533931 PYYP10082 97 aa11.58□□□□□ -0.56
CTTN-215ENST00000533931 SULT1A2P50226 295 aa11.58□□□□□ -0.56
CTTN-215ENST00000533931 FAM24BQ8N5W8 94 aa11.58□□□□□ -0.56
CTTN-215ENST00000533931 LRRC20Q8TCA0 184 aa11.58□□□□□ -0.56
CTTN-215ENST00000533931 MRPL53Q96EL3 112 aaKnown RBP11.58□□□□□ -0.56
CTTN-215ENST00000533931 TMEM167BQ9NRX6 74 aa11.58□□□□□ -0.56
CTTN-215ENST00000533931 PRELID1Q9Y255 219 aa11.58□□□□□ -0.56
CTTN-215ENST00000533931 BOLA2-SMG1P6H3BVE0 249 aa11.57□□□□□ -0.56
CTTN-215ENST00000533931 ARL14EPLP0DKL9 152 aa11.57□□□□□ -0.56
CTTN-215ENST00000533931 DEFB131AP59861 70 aa11.57□□□□□ -0.56
CTTN-215ENST00000533931 DEFA6Q01524 100 aa11.57□□□□□ -0.56
CTTN-215ENST00000533931 ZNF726P1Q15940 193 aa11.57□□□□□ -0.56
CTTN-215ENST00000533931 PSMG4Q5JS54 123 aa11.57□□□□□ -0.56
CTTN-215ENST00000533931 MBD3L1Q8WWY6 194 aa11.57□□□□□ -0.56
CTTN-215ENST00000533931 NDUFB4O95168 129 aa11.56□□□□□ -0.56
CTTN-215ENST00000533931 IGHV4-30-4P0DP06 118 aa11.56□□□□□ -0.56
CTTN-215ENST00000533931 FOXI2Q6ZQN5 318 aa11.56□□□□□ -0.56
CTTN-215ENST00000533931 ARL6IP6Q8N6S5 226 aa11.56□□□□□ -0.56
CTTN-215ENST00000533931 CLUHP3Q96NS8 147 aa11.56□□□□□ -0.56
CTTN-215ENST00000533931 AAMDCQ9H7C9 122 aa11.56□□□□□ -0.56
CTTN-215ENST00000533931 PLA2G2EQ9NZK7 142 aa11.56□□□□□ -0.56
CTTN-215ENST00000533931 UBQLN2Q9UHD9 624 aa11.56□□□□□ -0.56
CTTN-215ENST00000533931 TRAV1-1A0A0B4J248 108 aa11.55□□□□□ -0.56
CTTN-215ENST00000533931 MAP1LC3B2A6NCE7 125 aa11.55□□□□□ -0.56
CTTN-215ENST00000533931 SLC17A3O00476 420 aa11.55□□□□□ -0.56
CTTN-215ENST00000533931 OR10J4P0C629 311 aa11.55□□□□□ -0.56
CTTN-215ENST00000533931 GCHFRP30047 84 aa11.55□□□□□ -0.56
CTTN-215ENST00000533931 PSG3Q16557 428 aa11.55□□□□□ -0.56
CTTN-215ENST00000533931 LINC00322Q6ZN03 302 aaPredicted RBP11.55□□□□□ -0.56
CTTN-215ENST00000533931 DEFB125Q8N687 156 aa11.55□□□□□ -0.56
CTTN-215ENST00000533931 FAM213BQ8TBF2 198 aa11.55□□□□□ -0.56
CTTN-215ENST00000533931 MAP1LC3BQ9GZQ8 125 aa11.55□□□□□ -0.56
CTTN-215ENST00000533931 TUBA4BQ9H853 241 aa11.55□□□□□ -0.56
CTTN-215ENST00000533931 SRD5A3Q9H8P0 318 aa11.55□□□□□ -0.56
CTTN-215ENST00000533931 ARL2-SNX15V9GYD0 113 aa11.55□□□□□ -0.56
CTTN-215ENST00000533931 PRB2P02812 416 aaPredicted RBP11.54□□□□□ -0.56
CTTN-215ENST00000533931 SSX7Q7RTT5 188 aa11.54□□□□□ -0.56
CTTN-215ENST00000533931 MRAPQ8TCY5 172 aa11.54□□□□□ -0.56
CTTN-215ENST00000533931 LINC00052Q96N35 136 aa11.54□□□□□ -0.56
CTTN-215ENST00000533931 SAV1Q9H4B6 383 aaPredicted RBP11.54□□□□□ -0.56
CTTN-215ENST00000533931 BOLA1Q9Y3E2 137 aa11.54□□□□□ -0.56
CTTN-215ENST00000533931 KIR2DL5BA0A0G2JN68 375 aa11.53□□□□□ -0.56
CTTN-215ENST00000533931 KIR2DL5BA0A0G2JPC4 375 aa11.53□□□□□ -0.56
CTTN-215ENST00000533931 TEX46H3BTG2 121 aa11.53□□□□□ -0.56
CTTN-215ENST00000533931 HMGB3O15347 200 aaKnown RBP11.53□□□□□ -0.56
CTTN-215ENST00000533931 H2AFB1P0C5Y9 115 aa11.53□□□□□ -0.56
CTTN-215ENST00000533931 HLA-DRB4P13762 266 aa11.53□□□□□ -0.56
CTTN-215ENST00000533931 FHITP49789 147 aa11.53□□□□□ -0.56
CTTN-215ENST00000533931 FAM74A1Q5RGS3 127 aa11.53□□□□□ -0.56
CTTN-215ENST00000533931 EBLN2Q6P2I7 272 aa11.53□□□□□ -0.56
CTTN-215ENST00000533931 APRG1Q8IVJ8 170 aa11.53□□□□□ -0.56
CTTN-215ENST00000533931 KIR2DL5AQ8N109 375 aa11.53□□□□□ -0.56
CTTN-215ENST00000533931 KIR2DL5BQ8NHK3 375 aa11.53□□□□□ -0.56
CTTN-215ENST00000533931 BLNKQ8WV28 456 aa11.53□□□□□ -0.56
CTTN-215ENST00000533931 C20orf173Q96LM9 149 aa11.53□□□□□ -0.56
CTTN-215ENST00000533931 CITED4Q96RK1 184 aa11.53□□□□□ -0.56
CTTN-215ENST00000533931 WFDC10AQ9H1F0 79 aa11.53□□□□□ -0.56
CTTN-215ENST00000533931 HLA-DRB4X5D2U9 266 aa11.53□□□□□ -0.56
CTTN-215ENST00000533931 LOC102724200A0A096LPH7 203 aaPredicted RBP11.52□□□□□ -0.57
CTTN-215ENST00000533931 A0A0J9YX75 114 aa11.52□□□□□ -0.57
CTTN-215ENST00000533931 A0A1W2PRE2 83 aa11.52□□□□□ -0.57
CTTN-215ENST00000533931 A8MTW9 85 aa11.52□□□□□ -0.57
CTTN-215ENST00000533931 H3BTX0 84 aa11.52□□□□□ -0.57
CTTN-215ENST00000533931 DUSP14O95147 198 aaKnown RBP11.52□□□□□ -0.57
CTTN-215ENST00000533931 HBE1P02100 147 aa11.52□□□□□ -0.57
CTTN-215ENST00000533931 PPT1P50897 306 aa11.52□□□□□ -0.57
CTTN-215ENST00000533931 TRPT1Q86TN4 253 aaKnown RBP11.52□□□□□ -0.57
CTTN-215ENST00000533931 STHQ8IWL8 128 aa11.52□□□□□ -0.57
CTTN-215ENST00000533931 ZNF738Q8NE65 137 aa11.52□□□□□ -0.57
CTTN-215ENST00000533931 SFT2D1Q8WV19 159 aa11.52□□□□□ -0.57
CTTN-215ENST00000533931 NKX6-2Q9C056 277 aaPredicted RBP11.52□□□□□ -0.57
CTTN-215ENST00000533931 OTORQ9NRC9 128 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms