RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 OR5C1Q8NGR4 320 aa7.13□□□□□ -1.27
NUP98-220ENST00000533346 SAT2Q96F10 170 aaPredicted RBP7.13□□□□□ -1.27
NUP98-220ENST00000533346 C20orf173Q96LM9 149 aa7.13□□□□□ -1.27
NUP98-220ENST00000533346 LINC00052Q96N35 136 aa7.13□□□□□ -1.27
NUP98-220ENST00000533346 SLC50A1Q9BRV3 221 aa7.13□□□□□ -1.27
NUP98-220ENST00000533346 NPCDR1Q9BY65 106 aa7.13□□□□□ -1.27
NUP98-220ENST00000533346 PARD6GQ9BYG4 376 aaPredicted RBP7.13□□□□□ -1.27
NUP98-220ENST00000533346 MFFQ9GZY8 342 aa7.13□□□□□ -1.27
NUP98-220ENST00000533346 ZNF331Q9NQX6 463 aaPredicted RBP7.13□□□□□ -1.27
NUP98-220ENST00000533346 TMEM14CQ9P0S9 112 aa7.13□□□□□ -1.27
NUP98-220ENST00000533346 DOK5Q9P104 306 aa7.13□□□□□ -1.27
NUP98-220ENST00000533346 UBE2L5PA0A1B0GUS4 154 aa7.12□□□□□ -1.27
NUP98-220ENST00000533346 NUPR2A6NF83 97 aa7.12□□□□□ -1.27
NUP98-220ENST00000533346 COX7A2P2O60397 106 aa7.12□□□□□ -1.27
NUP98-220ENST00000533346 AMBPP02760 352 aa7.12□□□□□ -1.27
NUP98-220ENST00000533346 PSG9Q00887 426 aa7.12□□□□□ -1.27
NUP98-220ENST00000533346 PSG3Q16557 428 aa7.12□□□□□ -1.27
NUP98-220ENST00000533346 ZFAND6Q6FIF0 208 aa7.12□□□□□ -1.27
NUP98-220ENST00000533346 WDR61Q9GZS3 305 aaKnown RBP7.12□□□□□ -1.27
NUP98-220ENST00000533346 ALG5Q9Y673 324 aa7.12□□□□□ -1.27
NUP98-220ENST00000533346 PXMP4Q9Y6I8 212 aa7.12□□□□□ -1.27
NUP98-220ENST00000533346 RBMY1A1P0DJD3 496 aaKnown RBP7.11□□□□□ -1.27
NUP98-220ENST00000533346 RBMY1CP0DJD4 496 aa7.11□□□□□ -1.27
NUP98-220ENST00000533346 FGF7P21781 194 aa7.11□□□□□ -1.27
NUP98-220ENST00000533346 TCTAP57738 103 aa7.11□□□□□ -1.27
NUP98-220ENST00000533346 RBMY1FQ15415 496 aaKnown RBP7.11□□□□□ -1.27
NUP98-220ENST00000533346 LRRC37A5PQ49AS3 106 aa7.11□□□□□ -1.27
NUP98-220ENST00000533346 FAM78BQ5VT40 261 aa7.11□□□□□ -1.27
NUP98-220ENST00000533346 MORN5Q5VZ52 161 aa7.11□□□□□ -1.27
NUP98-220ENST00000533346 CEMP1Q6PRD7 247 aaPredicted RBP7.11□□□□□ -1.27
NUP98-220ENST00000533346 KCNIP2Q9NS61 270 aa7.11□□□□□ -1.27
NUP98-220ENST00000533346 HSPB11Q9Y547 144 aa7.11□□□□□ -1.27
NUP98-220ENST00000533346 IGHV4-28A0A0C4DH34 117 aa7.1□□□□□ -1.27
NUP98-220ENST00000533346 F6UB75 175 aa7.1□□□□□ -1.27
NUP98-220ENST00000533346 RPL12P30050 165 aaKnown RBP7.1□□□□□ -1.27
NUP98-220ENST00000533346 CNN1P51911 297 aaKnown RBP7.1□□□□□ -1.27
NUP98-220ENST00000533346 DEFB1P60022 68 aa7.1□□□□□ -1.27
NUP98-220ENST00000533346 PDE6HQ13956 83 aa7.1□□□□□ -1.27
NUP98-220ENST00000533346 OR8A1Q8NGG7 326 aa7.1□□□□□ -1.27
NUP98-220ENST00000533346 C11orf45Q8TAV5 145 aa7.1□□□□□ -1.27
NUP98-220ENST00000533346 MRPL53Q96EL3 112 aaKnown RBP7.1□□□□□ -1.27
NUP98-220ENST00000533346 IGF2BP2-AS1Q96M15 143 aa7.1□□□□□ -1.27
NUP98-220ENST00000533346 ATP5SQ99766 215 aa7.1□□□□□ -1.27
NUP98-220ENST00000533346 TMEM189A5PLL7 270 aa7.09□□□□□ -1.27
NUP98-220ENST00000533346 C11orf94C9JXX5 98 aa7.09□□□□□ -1.27
NUP98-220ENST00000533346 C17orf112F2Z3M2 114 aa7.09□□□□□ -1.27
NUP98-220ENST00000533346 H3BQ15 152 aa7.09□□□□□ -1.27
NUP98-220ENST00000533346 CRXO43186 299 aaPredicted RBP7.09□□□□□ -1.27
NUP98-220ENST00000533346 HIST1H1EP10412 219 aaKnown RBP7.09□□□□□ -1.27
NUP98-220ENST00000533346 FGL1Q08830 312 aa7.09□□□□□ -1.27
NUP98-220ENST00000533346 OXA1LQ15070 435 aa7.09□□□□□ -1.27
NUP98-220ENST00000533346 C1orf158Q8N1D5 194 aa7.09□□□□□ -1.27
NUP98-220ENST00000533346 OR11H7Q8NGC8 314 aa7.09□□□□□ -1.27
NUP98-220ENST00000533346 OR4B1Q8NGF8 309 aa7.09□□□□□ -1.27
NUP98-220ENST00000533346 MRPL32Q9BYC8 188 aaKnown RBP7.09□□□□□ -1.27
NUP98-220ENST00000533346 SLC35B3Q9H1N7 401 aa7.09□□□□□ -1.27
NUP98-220ENST00000533346 XCL2Q9UBD3 114 aa7.09□□□□□ -1.27
NUP98-220ENST00000533346 KLK5Q9Y337 293 aaPredicted RBP7.09□□□□□ -1.27
NUP98-220ENST00000533346 TRBV19A0A075B6N1 114 aa7.08□□□□□ -1.28
NUP98-220ENST00000533346 GIPP09681 153 aaPredicted RBP7.08□□□□□ -1.28
NUP98-220ENST00000533346 FCN2Q15485 313 aa7.08□□□□□ -1.28
NUP98-220ENST00000533346 RGS21Q2M5E4 152 aa7.08□□□□□ -1.28
NUP98-220ENST00000533346 RNF182Q8N6D2 247 aa7.08□□□□□ -1.28
NUP98-220ENST00000533346 ZNF738Q8NE65 137 aa7.08□□□□□ -1.28
NUP98-220ENST00000533346 THAP6Q8TBB0 222 aa7.08□□□□□ -1.28
NUP98-220ENST00000533346 PHLDA1Q8WV24 401 aaPredicted RBP7.08□□□□□ -1.28
NUP98-220ENST00000533346 FAM167A-AS1Q96KT0 104 aa7.08□□□□□ -1.28
NUP98-220ENST00000533346 AQP10Q96PS8 301 aa7.08□□□□□ -1.28
NUP98-220ENST00000533346 ODF3Q96PU9 254 aa7.08□□□□□ -1.28
NUP98-220ENST00000533346 C20orf144Q9BQM9 153 aa7.08□□□□□ -1.28
NUP98-220ENST00000533346 MED28Q9H204 178 aa7.08□□□□□ -1.28
NUP98-220ENST00000533346 ZNF586Q9NXT0 402 aa7.08□□□□□ -1.28
NUP98-220ENST00000533346 MBD2Q9UBB5 411 aa7.08□□□□□ -1.28
NUP98-220ENST00000533346 PRELID1Q9Y255 219 aa7.08□□□□□ -1.28
NUP98-220ENST00000533346 GOLT1BQ9Y3E0 138 aa7.08□□□□□ -1.28
NUP98-220ENST00000533346 TIMM9Q9Y5J7 89 aa7.08□□□□□ -1.28
NUP98-220ENST00000533346 ALMS1Q8TCU4 4167 aa7.07□□□□□ -1.28
NUP98-220ENST00000533346 TRAV5A0A0B4J249 113 aa7.07□□□□□ -1.28
NUP98-220ENST00000533346 TEX48A0A1B0GUV7 120 aa7.07□□□□□ -1.28
NUP98-220ENST00000533346 CXorf65A6NEN9 183 aa7.07□□□□□ -1.28
NUP98-220ENST00000533346 JTBO76095 146 aa7.07□□□□□ -1.28
NUP98-220ENST00000533346 HLA-DMBP28068 263 aa7.07□□□□□ -1.28
NUP98-220ENST00000533346 TSPOP30536 169 aa7.07□□□□□ -1.28
NUP98-220ENST00000533346 CLINT1Q14677 625 aa7.07□□□□□ -1.28
NUP98-220ENST00000533346 IGFL4Q6B9Z1 124 aa7.07□□□□□ -1.28
NUP98-220ENST00000533346 LRRC20Q8TCA0 184 aa7.07□□□□□ -1.28
NUP98-220ENST00000533346 RPUSD4Q96CM3 377 aaKnown RBP7.07□□□□□ -1.28
NUP98-220ENST00000533346 SLC25A2Q9BXI2 301 aa7.07□□□□□ -1.28
NUP98-220ENST00000533346 RFNGQ9Y644 331 aa7.07□□□□□ -1.28
NUP98-220ENST00000533346 BOLA2-SMG1P6H3BVE0 249 aa7.06□□□□□ -1.28
NUP98-220ENST00000533346 SLC17A3O00476 420 aa7.06□□□□□ -1.28
NUP98-220ENST00000533346 NDUFB4O95168 129 aa7.06□□□□□ -1.28
NUP98-220ENST00000533346 IFNA5P01569 189 aa7.06□□□□□ -1.28
NUP98-220ENST00000533346 IGKV3-20P01619 116 aa7.06□□□□□ -1.28
NUP98-220ENST00000533346 CDKN1BP46527 198 aa7.06□□□□□ -1.28
NUP98-220ENST00000533346 NANOS2P60321 138 aaKnown RBP7.06□□□□□ -1.28
NUP98-220ENST00000533346 GCSAMLQ5JQS6 135 aa7.06□□□□□ -1.28
NUP98-220ENST00000533346 LYPD1Q8N2G4 141 aa7.06□□□□□ -1.28
NUP98-220ENST00000533346 TMEM256Q8N2U0 113 aa7.06□□□□□ -1.28
NUP98-220ENST00000533346 SCGB1C1Q8TD33 95 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms