RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TRAV5A0A0B4J249 113 aa14.86□□□□□ -0.03
CCS-208ENST00000533244 FAM78BQ5VT40 261 aa14.86□□□□□ -0.03
CCS-208ENST00000533244 ZFAND6Q6FIF0 208 aa14.86□□□□□ -0.03
CCS-208ENST00000533244 ZNF709Q8N972 641 aa14.86□□□□□ -0.03
CCS-208ENST00000533244 PARD6GQ9BYG4 376 aaPredicted RBP14.86□□□□□ -0.03
CCS-208ENST00000533244 C11orf68Q9H3H3 251 aaKnown RBP14.86□□□□□ -0.03
CCS-208ENST00000533244 HRH4Q9H3N8 390 aa14.86□□□□□ -0.03
CCS-208ENST00000533244 ZNF331Q9NQX6 463 aaPredicted RBP14.86□□□□□ -0.03
CCS-208ENST00000533244 HLA-DMBP28068 263 aa14.85□□□□□ -0.03
CCS-208ENST00000533244 SLC50A1Q9BRV3 221 aa14.85□□□□□ -0.03
CCS-208ENST00000533244 SMIM3Q9BZL3 60 aa14.85□□□□□ -0.03
CCS-208ENST00000533244 WFDC1Q9HC57 220 aa14.85□□□□□ -0.03
CCS-208ENST00000533244 CLEC5AQ9NY25 188 aa14.85□□□□□ -0.03
CCS-208ENST00000533244 H3BQ15 152 aa14.84□□□□□ -0.03
CCS-208ENST00000533244 IGKV3-20P01619 116 aa14.84□□□□□ -0.03
CCS-208ENST00000533244 PSG3Q16557 428 aa14.84□□□□□ -0.03
CCS-208ENST00000533244 Q5BKY6 102 aa14.84□□□□□ -0.03
CCS-208ENST00000533244 AMTNQ6UX39 209 aa14.84□□□□□ -0.03
CCS-208ENST00000533244 Q8NAQ8 132 aa14.84□□□□□ -0.03
CCS-208ENST00000533244 OR4B1Q8NGF8 309 aa14.84□□□□□ -0.03
CCS-208ENST00000533244 SAT2Q96F10 170 aaPredicted RBP14.84□□□□□ -0.03
CCS-208ENST00000533244 TMEM14CQ9P0S9 112 aa14.84□□□□□ -0.03
CCS-208ENST00000533244 XCL2Q9UBD3 114 aa14.84□□□□□ -0.03
CCS-208ENST00000533244 X6R8D5 127 aa14.84□□□□□ -0.03
CCS-208ENST00000533244 C17orf112F2Z3M2 114 aa14.83□□□□□ -0.03
CCS-208ENST00000533244 SLC17A3O00476 420 aa14.83□□□□□ -0.03
CCS-208ENST00000533244 PSG9Q00887 426 aa14.83□□□□□ -0.03
CCS-208ENST00000533244 GUK1Q16774 197 aa14.83□□□□□ -0.03
CCS-208ENST00000533244 LRRC20Q8TCA0 184 aa14.83□□□□□ -0.03
CCS-208ENST00000533244 AQP10Q96PS8 301 aa14.83□□□□□ -0.03
CCS-208ENST00000533244 DYNC2H1Q8NCM8 4307 aaKnown RBP14.83□□□□□ -0.04
CCS-208ENST00000533244 IFNA5P01569 189 aa14.83□□□□□ -0.04
CCS-208ENST00000533244 SNRPCP09234 159 aaKnown RBP14.83□□□□□ -0.04
CCS-208ENST00000533244 ZNF738Q8NE65 137 aa14.83□□□□□ -0.04
CCS-208ENST00000533244 SLC35B3Q9H1N7 401 aa14.83□□□□□ -0.04
CCS-208ENST00000533244 ZNF253O75346 499 aa14.82□□□□□ -0.04
CCS-208ENST00000533244 DUSP14O95147 198 aaKnown RBP14.82□□□□□ -0.04
CCS-208ENST00000533244 MIFP14174 115 aa14.82□□□□□ -0.04
CCS-208ENST00000533244 CNN1P51911 297 aaKnown RBP14.82□□□□□ -0.04
CCS-208ENST00000533244 FAM167A-AS1Q96KT0 104 aa14.82□□□□□ -0.04
CCS-208ENST00000533244 ZNF586Q9NXT0 402 aa14.82□□□□□ -0.04
CCS-208ENST00000533244 TENM2Q9NT68 2774 aa14.82□□□□□ -0.04
CCS-208ENST00000533244 H3BTX0 84 aa14.81□□□□□ -0.04
CCS-208ENST00000533244 FXYD7P58549 80 aa14.81□□□□□ -0.04
CCS-208ENST00000533244 ZNF705AQ6ZN79 300 aaPredicted RBP14.81□□□□□ -0.04
CCS-208ENST00000533244 OR8A1Q8NGG7 326 aa14.81□□□□□ -0.04
CCS-208ENST00000533244 SCGB1C1Q8TD33 95 aa14.81□□□□□ -0.04
CCS-208ENST00000533244 SLC25A2Q9BXI2 301 aa14.81□□□□□ -0.04
CCS-208ENST00000533244 MRPL32Q9BYC8 188 aaKnown RBP14.81□□□□□ -0.04
CCS-208ENST00000533244 G3V3Q6 166 aa14.8□□□□□ -0.04
CCS-208ENST00000533244 MIR17HGQ75NE6 70 aa14.8□□□□□ -0.04
CCS-208ENST00000533244 RPUSD4Q96CM3 377 aaKnown RBP14.8□□□□□ -0.04
CCS-208ENST00000533244 MFFQ9GZY8 342 aa14.8□□□□□ -0.04
CCS-208ENST00000533244 TRBV19A0A075B6N1 114 aa14.79□□□□□ -0.04
CCS-208ENST00000533244 IGHV4-28A0A0C4DH34 117 aa14.79□□□□□ -0.04
CCS-208ENST00000533244 ZNF705FA8MVS1 300 aaPredicted RBP14.79□□□□□ -0.04
CCS-208ENST00000533244 ZNF705DP0CH99 300 aaPredicted RBP14.79□□□□□ -0.04
CCS-208ENST00000533244 ZNF705BP0CI00 300 aaPredicted RBP14.79□□□□□ -0.04
CCS-208ENST00000533244 RBMY1A1P0DJD3 496 aaKnown RBP14.79□□□□□ -0.04
CCS-208ENST00000533244 RBMY1CP0DJD4 496 aa14.79□□□□□ -0.04
CCS-208ENST00000533244 HIST1H1EP10412 219 aaKnown RBP14.79□□□□□ -0.04
CCS-208ENST00000533244 RBMY1FQ15415 496 aaKnown RBP14.79□□□□□ -0.04
CCS-208ENST00000533244 FUT9Q9Y231 359 aa14.79□□□□□ -0.04
CCS-208ENST00000533244 RNF222A6NCQ9 220 aa14.78□□□□□ -0.04
CCS-208ENST00000533244 PYYP10082 97 aa14.78□□□□□ -0.04
CCS-208ENST00000533244 PDE6HQ13956 83 aa14.78□□□□□ -0.04
CCS-208ENST00000533244 FFAR4Q5NUL3 377 aa14.78□□□□□ -0.04
CCS-208ENST00000533244 OR2T35Q8NGX2 323 aa14.78□□□□□ -0.04
CCS-208ENST00000533244 NEU1Q99519 415 aa14.78□□□□□ -0.04
CCS-208ENST00000533244 DEFB4AO15263 64 aa14.77□□□□□ -0.04
CCS-208ENST00000533244 NDUFB4O95168 129 aa14.77□□□□□ -0.04
CCS-208ENST00000533244 ZNF266Q14584 549 aa14.77□□□□□ -0.04
CCS-208ENST00000533244 TNFSF18Q9UNG2 199 aa14.77□□□□□ -0.04
CCS-208ENST00000533244 TIMM9Q9Y5J7 89 aa14.77□□□□□ -0.04
CCS-208ENST00000533244 RFNGQ9Y644 331 aa14.77□□□□□ -0.04
CCS-208ENST00000533244 AMBPP02760 352 aa14.76□□□□□ -0.05
CCS-208ENST00000533244 HIST1H1AQ02539 215 aaPredicted RBP14.76□□□□□ -0.05
CCS-208ENST00000533244 C1orf158Q8N1D5 194 aa14.76□□□□□ -0.05
CCS-208ENST00000533244 MRPL53Q96EL3 112 aaKnown RBP14.76□□□□□ -0.05
CCS-208ENST00000533244 IGF2BP2-AS1Q96M15 143 aa14.76□□□□□ -0.05
CCS-208ENST00000533244 LYSTQ99698 3801 aa14.76□□□□□ -0.05
CCS-208ENST00000533244 PRAC2D3DTV9 90 aa14.75□□□□□ -0.05
CCS-208ENST00000533244 CRXO43186 299 aaPredicted RBP14.75□□□□□ -0.05
CCS-208ENST00000533244 OR51M1Q9H341 326 aa14.75□□□□□ -0.05
CCS-208ENST00000533244 FXYD6-FXYD2A0A087WZ82 144 aa14.75□□□□□ -0.05
CCS-208ENST00000533244 BOLA2-SMG1P6H3BVE0 249 aa14.75□□□□□ -0.05
CCS-208ENST00000533244 M0R2Z0 102 aa14.75□□□□□ -0.05
CCS-208ENST00000533244 SPINK13Q1W4C9 94 aa14.75□□□□□ -0.05
CCS-208ENST00000533244 FXYD5Q96DB9 178 aa14.75□□□□□ -0.05
CCS-208ENST00000533244 SMIM9A6NGZ8 99 aa14.74□□□□□ -0.05
CCS-208ENST00000533244 PRB4P10163 310 aaPredicted RBP14.74□□□□□ -0.05
CCS-208ENST00000533244 RHOBP62745 196 aa14.74□□□□□ -0.05
CCS-208ENST00000533244 PMS2P11Q13670 270 aa14.74□□□□□ -0.05
CCS-208ENST00000533244 INO80EQ8NBZ0 244 aaPredicted RBP14.74□□□□□ -0.05
CCS-208ENST00000533244 C11orf45Q8TAV5 145 aa14.74□□□□□ -0.05
CCS-208ENST00000533244 ZNF503Q96F45 646 aa14.74□□□□□ -0.05
CCS-208ENST00000533244 PAXXQ9BUH6 204 aa14.74□□□□□ -0.05
CCS-208ENST00000533244 PLECQ15149 4684 aaKnown RBP14.73□□□□□ -0.05
CCS-208ENST00000533244 RYR3Q15413 4870 aa14.73□□□□□ -0.05
CCS-208ENST00000533244 CXorf65A6NEN9 183 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms