RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 PSMG4Q5JS54 123 aa9.59□□□□□ -0.87
TRAPPC4-212ENST00000533058 OR10G4Q8NGN3 311 aa9.59□□□□□ -0.87
TRAPPC4-212ENST00000533058 OR10G9Q8NGN4 311 aa9.59□□□□□ -0.87
TRAPPC4-212ENST00000533058 OR10G7Q8NGN6 311 aa9.59□□□□□ -0.87
TRAPPC4-212ENST00000533058 DCANP1Q8TF63 244 aa9.59□□□□□ -0.87
TRAPPC4-212ENST00000533058 SEPSECSQ9HD40 501 aaKnown RBP9.59□□□□□ -0.87
TRAPPC4-212ENST00000533058 NBEAL2Q6ZNJ1 2754 aa9.58□□□□□ -0.88
TRAPPC4-212ENST00000533058 KIR2DL5BA0A0G2JN68 375 aa9.58□□□□□ -0.88
TRAPPC4-212ENST00000533058 KIR2DL5BA0A0G2JPC4 375 aa9.58□□□□□ -0.88
TRAPPC4-212ENST00000533058 H3BTX0 84 aa9.58□□□□□ -0.88
TRAPPC4-212ENST00000533058 OR7C2O60412 319 aa9.58□□□□□ -0.88
TRAPPC4-212ENST00000533058 TAS2R45P59539 299 aa9.58□□□□□ -0.88
TRAPPC4-212ENST00000533058 LGALSLQ3ZCW2 172 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC4-212ENST00000533058 AKR1C8PQ5T2L2 129 aa9.58□□□□□ -0.88
TRAPPC4-212ENST00000533058 SAMD13Q5VXD3 122 aa9.58□□□□□ -0.88
TRAPPC4-212ENST00000533058 APRG1Q8IVJ8 170 aa9.58□□□□□ -0.88
TRAPPC4-212ENST00000533058 KIR2DL5AQ8N109 375 aa9.58□□□□□ -0.88
TRAPPC4-212ENST00000533058 FAM24BQ8N5W8 94 aa9.58□□□□□ -0.88
TRAPPC4-212ENST00000533058 KIR2DL5BQ8NHK3 375 aa9.58□□□□□ -0.88
TRAPPC4-212ENST00000533058 MAP6D1Q9H9H5 199 aa9.58□□□□□ -0.88
TRAPPC4-212ENST00000533058 TPT1P13693 172 aaKnown RBP9.57□□□□□ -0.88
TRAPPC4-212ENST00000533058 CDC34P49427 236 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC4-212ENST00000533058 NKX2-5P52952 324 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC4-212ENST00000533058 KHDC3LQ587J8 217 aa9.57□□□□□ -0.88
TRAPPC4-212ENST00000533058 TMEM41BQ5BJD5 291 aa9.57□□□□□ -0.88
TRAPPC4-212ENST00000533058 CASC10Q5T4H9 136 aa9.57□□□□□ -0.88
TRAPPC4-212ENST00000533058 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.57□□□□□ -0.88
TRAPPC4-212ENST00000533058 PAXXQ9BUH6 204 aa9.57□□□□□ -0.88
TRAPPC4-212ENST00000533058 SLC25A2Q9BXI2 301 aa9.57□□□□□ -0.88
TRAPPC4-212ENST00000533058 A0A087X0K7 114 aa9.56□□□□□ -0.88
TRAPPC4-212ENST00000533058 UBE2CO00762 179 aa9.56□□□□□ -0.88
TRAPPC4-212ENST00000533058 ISLRO14498 428 aa9.56□□□□□ -0.88
TRAPPC4-212ENST00000533058 HMGB3O15347 200 aaKnown RBP9.56□□□□□ -0.88
TRAPPC4-212ENST00000533058 EIF3GO75821 320 aaKnown RBP eCLIP9.56□□□□□ -0.88
TRAPPC4-212ENST00000533058 OR10J4P0C629 311 aa9.56□□□□□ -0.88
TRAPPC4-212ENST00000533058 PYYP10082 97 aa9.56□□□□□ -0.88
TRAPPC4-212ENST00000533058 PSMB3P49720 205 aa9.56□□□□□ -0.88
TRAPPC4-212ENST00000533058 APOC4P55056 127 aa9.56□□□□□ -0.88
TRAPPC4-212ENST00000533058 LCN15Q6UWW0 184 aa9.56□□□□□ -0.88
TRAPPC4-212ENST00000533058 Q6ZWC4 215 aa9.56□□□□□ -0.88
TRAPPC4-212ENST00000533058 BAP18Q8IXM2 172 aa9.56□□□□□ -0.88
TRAPPC4-212ENST00000533058 C9orf62Q8N4C0 152 aa9.56□□□□□ -0.88
TRAPPC4-212ENST00000533058 BLNKQ8WV28 456 aa9.56□□□□□ -0.88
TRAPPC4-212ENST00000533058 ACTR3CQ9C0K3 210 aaPredicted RBP9.56□□□□□ -0.88
TRAPPC4-212ENST00000533058 OR51M1Q9H341 326 aa9.56□□□□□ -0.88
TRAPPC4-212ENST00000533058 TMEM14CQ9P0S9 112 aa9.56□□□□□ -0.88
TRAPPC4-212ENST00000533058 TP53TG1Q9Y2A0 90 aa9.56□□□□□ -0.88
TRAPPC4-212ENST00000533058 MRPS12O15235 138 aaKnown RBP9.55□□□□□ -0.88
TRAPPC4-212ENST00000533058 HIST1H1EP10412 219 aaKnown RBP9.55□□□□□ -0.88
TRAPPC4-212ENST00000533058 SPP1P10451 314 aa9.55□□□□□ -0.88
TRAPPC4-212ENST00000533058 UBE2L3P68036 154 aaKnown RBP9.55□□□□□ -0.88
TRAPPC4-212ENST00000533058 ZNF124Q15973 351 aa9.55□□□□□ -0.88
TRAPPC4-212ENST00000533058 GUK1Q16774 197 aa9.55□□□□□ -0.88
TRAPPC4-212ENST00000533058 IGFL4Q6B9Z1 124 aa9.55□□□□□ -0.88
TRAPPC4-212ENST00000533058 IQCF2Q8IXL9 164 aa9.55□□□□□ -0.88
TRAPPC4-212ENST00000533058 ZNF738Q8NE65 137 aa9.55□□□□□ -0.88
TRAPPC4-212ENST00000533058 IL17DQ8TAD2 202 aa9.55□□□□□ -0.88
TRAPPC4-212ENST00000533058 C17orf77Q96MU5 243 aa9.55□□□□□ -0.88
TRAPPC4-212ENST00000533058 HRH4Q9H3N8 390 aa9.55□□□□□ -0.88
TRAPPC4-212ENST00000533058 RETNQ9HD89 108 aa9.55□□□□□ -0.88
TRAPPC4-212ENST00000533058 KNCNA6PVL3 124 aa9.54□□□□□ -0.88
TRAPPC4-212ENST00000533058 H3BQ15 152 aa9.54□□□□□ -0.88
TRAPPC4-212ENST00000533058 SOCS3O14543 225 aa9.54□□□□□ -0.88
TRAPPC4-212ENST00000533058 SEC11BP0C7V7 166 aa9.54□□□□□ -0.88
TRAPPC4-212ENST00000533058 IGLC2P0DOY2 106 aa9.54□□□□□ -0.88
TRAPPC4-212ENST00000533058 RPL35AP18077 110 aaKnown RBP9.54□□□□□ -0.88
TRAPPC4-212ENST00000533058 ACTL10Q5JWF8 245 aa9.54□□□□□ -0.88
TRAPPC4-212ENST00000533058 EIF5AL1Q6IS14 154 aaKnown RBP9.54□□□□□ -0.88
TRAPPC4-212ENST00000533058 SLC51BQ86UW2 128 aa9.54□□□□□ -0.88
TRAPPC4-212ENST00000533058 STHQ8IWL8 128 aa9.54□□□□□ -0.88
TRAPPC4-212ENST00000533058 RPP25LQ8N5L8 163 aaKnown RBP9.54□□□□□ -0.88
TRAPPC4-212ENST00000533058 RNF182Q8N6D2 247 aa9.54□□□□□ -0.88
TRAPPC4-212ENST00000533058 RNF141Q8WVD5 230 aa9.54□□□□□ -0.88
TRAPPC4-212ENST00000533058 TMED6Q8WW62 240 aa9.54□□□□□ -0.88
TRAPPC4-212ENST00000533058 FAM167A-AS1Q96KT0 104 aa9.54□□□□□ -0.88
TRAPPC4-212ENST00000533058 OVOL2Q9BRP0 275 aa9.54□□□□□ -0.88
TRAPPC4-212ENST00000533058 SLC50A1Q9BRV3 221 aa9.54□□□□□ -0.88
TRAPPC4-212ENST00000533058 RPRMQ9NS64 109 aa9.54□□□□□ -0.88
TRAPPC4-212ENST00000533058 ZNF586Q9NXT0 402 aa9.54□□□□□ -0.88
TRAPPC4-212ENST00000533058 NBEAP1P0C6P0 100 aa9.53□□□□□ -0.88
TRAPPC4-212ENST00000533058 EBLN2Q6P2I7 272 aa9.53□□□□□ -0.88
TRAPPC4-212ENST00000533058 PQLC2Q6ZP29 291 aa9.53□□□□□ -0.88
TRAPPC4-212ENST00000533058 STOML3Q8TAV4 291 aa9.53□□□□□ -0.88
TRAPPC4-212ENST00000533058 RAB24Q969Q5 203 aa9.53□□□□□ -0.88
TRAPPC4-212ENST00000533058 C20orf173Q96LM9 149 aa9.53□□□□□ -0.88
TRAPPC4-212ENST00000533058 TRBV19A0A075B6N1 114 aa9.52□□□□□ -0.89
TRAPPC4-212ENST00000533058 TRAV8-2A0A0B4J237 113 aa9.52□□□□□ -0.89
TRAPPC4-212ENST00000533058 SLC17A3O00476 420 aa9.52□□□□□ -0.89
TRAPPC4-212ENST00000533058 ARL14EPLP0DKL9 152 aa9.52□□□□□ -0.89
TRAPPC4-212ENST00000533058 HLA-DMBP28068 263 aa9.52□□□□□ -0.89
TRAPPC4-212ENST00000533058 PSG9Q00887 426 aa9.52□□□□□ -0.89
TRAPPC4-212ENST00000533058 FAM213BQ8TBF2 198 aa9.52□□□□□ -0.89
TRAPPC4-212ENST00000533058 AAMDCQ9H7C9 122 aa9.52□□□□□ -0.89
TRAPPC4-212ENST00000533058 ZNF331Q9NQX6 463 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC4-212ENST00000533058 CTXND1A0A1B0GTU2 59 aa9.51□□□□□ -0.89
TRAPPC4-212ENST00000533058 UMAD1C9J7I0 102 aa9.51□□□□□ -0.89
TRAPPC4-212ENST00000533058 SPRY2O43597 315 aa9.51□□□□□ -0.89
TRAPPC4-212ENST00000533058 DEFB1P60022 68 aa9.51□□□□□ -0.89
TRAPPC4-212ENST00000533058 PDE6HQ13956 83 aa9.51□□□□□ -0.89
TRAPPC4-212ENST00000533058 PSG3Q16557 428 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms