RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 TSSC4Q9Y5U2 329 aaPredicted RBP8.69□□□□□ -1.02
COLCA1-203ENST00000532918 LMO1P25800 156 aa8.69□□□□□ -1.02
COLCA1-203ENST00000532918 NMSQ5H8A3 153 aa8.69□□□□□ -1.02
COLCA1-203ENST00000532918 LINC00311Q8N616 119 aa8.69□□□□□ -1.02
COLCA1-203ENST00000532918 SCRT1Q9BWW7 348 aa8.69□□□□□ -1.02
COLCA1-203ENST00000532918 SPANXCQ9NY87 97 aa8.69□□□□□ -1.02
COLCA1-203ENST00000532918 RMI2Q96E14 147 aa8.68□□□□□ -1.02
COLCA1-203ENST00000532918 KIAA1671Q9BY89 1806 aa8.68□□□□□ -1.02
COLCA1-203ENST00000532918 NDUFC2O95298 119 aa8.68□□□□□ -1.02
COLCA1-203ENST00000532918 ADMP35318 185 aa8.68□□□□□ -1.02
COLCA1-203ENST00000532918 PSG3Q16557 428 aa8.68□□□□□ -1.02
COLCA1-203ENST00000532918 NAA38Q9BRA0 125 aaKnown RBP8.68□□□□□ -1.02
COLCA1-203ENST00000532918 V9GYY9 64 aa8.68□□□□□ -1.02
COLCA1-203ENST00000532918 IGKV2-40A0A087WW87 121 aaPredicted RBP8.68□□□□□ -1.02
COLCA1-203ENST00000532918 H3BUA1 57 aa8.68□□□□□ -1.02
COLCA1-203ENST00000532918 IGKV2D-40P01614 121 aaPredicted RBP8.68□□□□□ -1.02
COLCA1-203ENST00000532918 PRB1P04280 392 aa8.68□□□□□ -1.02
COLCA1-203ENST00000532918 LINC01559Q495D7 138 aa8.68□□□□□ -1.02
COLCA1-203ENST00000532918 KLHDC3Q9BQ90 382 aa8.68□□□□□ -1.02
COLCA1-203ENST00000532918 GGTLC1Q9BX51 225 aa8.68□□□□□ -1.02
COLCA1-203ENST00000532918 IGKCP01834 107 aa8.68□□□□□ -1.02
COLCA1-203ENST00000532918 VPREB3Q9UKI3 123 aa8.68□□□□□ -1.02
COLCA1-203ENST00000532918 MORN3Q6PF18 240 aaPredicted RBP8.67□□□□□ -1.02
COLCA1-203ENST00000532918 LHFPL1Q86WI0 220 aa8.67□□□□□ -1.02
COLCA1-203ENST00000532918 NPIPB5A8MRT5 1133 aa8.67□□□□□ -1.02
COLCA1-203ENST00000532918 HIST3H2BBQ8N257 126 aa8.67□□□□□ -1.02
COLCA1-203ENST00000532918 KAAG1Q9UBP8 84 aa8.67□□□□□ -1.02
COLCA1-203ENST00000532918 ESPL1Q14674 2120 aa8.67□□□□□ -1.02
COLCA1-203ENST00000532918 TRACP01848 142 aa8.67□□□□□ -1.02
COLCA1-203ENST00000532918 DEFB130BP0DP73 79 aa8.67□□□□□ -1.02
COLCA1-203ENST00000532918 DEFB130AP0DP74 79 aa8.67□□□□□ -1.02
COLCA1-203ENST00000532918 LOXP28300 417 aaPredicted RBP8.67□□□□□ -1.02
COLCA1-203ENST00000532918 BCL6BQ8N143 479 aaPredicted RBP8.67□□□□□ -1.02
COLCA1-203ENST00000532918 COL6A6A6NMZ7 2263 aa8.67□□□□□ -1.02
COLCA1-203ENST00000532918 TMEM258P61165 79 aa8.67□□□□□ -1.02
COLCA1-203ENST00000532918 PDE6HQ13956 83 aa8.67□□□□□ -1.02
COLCA1-203ENST00000532918 DAZAP2Q15038 168 aaPredicted RBP8.67□□□□□ -1.02
COLCA1-203ENST00000532918 SPATA31B1PQ5VZV4 182 aa8.67□□□□□ -1.02
COLCA1-203ENST00000532918 ADAMTSL5Q6ZMM2 481 aa8.67□□□□□ -1.02
COLCA1-203ENST00000532918 ATP6V0BQ99437 205 aa8.67□□□□□ -1.02
COLCA1-203ENST00000532918 NDUFA4O00483 81 aa8.67□□□□□ -1.02
COLCA1-203ENST00000532918 IGHV2-5P01817 119 aa8.67□□□□□ -1.02
COLCA1-203ENST00000532918 FXYD7P58549 80 aa8.67□□□□□ -1.02
COLCA1-203ENST00000532918 YPEL3P61236 119 aaPredicted RBP8.67□□□□□ -1.02
COLCA1-203ENST00000532918 GAGE2AQ6NT46 116 aa8.67□□□□□ -1.02
COLCA1-203ENST00000532918 ATP5L2Q7Z4Y8 100 aa8.67□□□□□ -1.02
COLCA1-203ENST00000532918 PI4KAP42356 2102 aa8.66□□□□□ -1.02
COLCA1-203ENST00000532918 TSKUQ8WUA8 353 aa8.66□□□□□ -1.02
COLCA1-203ENST00000532918 CHCHD1Q96BP2 118 aaKnown RBP8.66□□□□□ -1.02
COLCA1-203ENST00000532918 SMPXQ9UHP9 88 aa8.66□□□□□ -1.02
COLCA1-203ENST00000532918 A0A087WV48 116 aa8.66□□□□□ -1.02
COLCA1-203ENST00000532918 LINC00473A8K010 186 aa8.66□□□□□ -1.02
COLCA1-203ENST00000532918 F5H768 121 aa8.66□□□□□ -1.02
COLCA1-203ENST00000532918 RHODO00212 210 aa8.66□□□□□ -1.02
COLCA1-203ENST00000532918 IGHV3-53P01767 116 aa8.66□□□□□ -1.02
COLCA1-203ENST00000532918 RPL23P62829 140 aaKnown RBP8.66□□□□□ -1.02
COLCA1-203ENST00000532918 CT83Q5H943 113 aa8.66□□□□□ -1.02
COLCA1-203ENST00000532918 MRPL27Q9P0M9 148 aaKnown RBP8.66□□□□□ -1.02
COLCA1-203ENST00000532918 TRAV3A0A0B4J244 114 aa8.66□□□□□ -1.02
COLCA1-203ENST00000532918 TMEM238C9JI98 176 aa8.66□□□□□ -1.02
COLCA1-203ENST00000532918 GZMBP10144 247 aa8.66□□□□□ -1.02
COLCA1-203ENST00000532918 PPIFP30405 207 aaKnown RBP8.66□□□□□ -1.02
COLCA1-203ENST00000532918 SS18Q15532 418 aa8.66□□□□□ -1.02
COLCA1-203ENST00000532918 ZNF876PQ49A33 203 aa8.66□□□□□ -1.02
COLCA1-203ENST00000532918 ZNF833PQ6ZTB9 187 aa8.66□□□□□ -1.02
COLCA1-203ENST00000532918 C1QL4Q86Z23 238 aa8.66□□□□□ -1.02
COLCA1-203ENST00000532918 GFI1Q99684 422 aa8.66□□□□□ -1.02
COLCA1-203ENST00000532918 TCRAP04437 139 aa8.65□□□□□ -1.02
COLCA1-203ENST00000532918 CHTOPQ9Y3Y2 248 aaKnown RBP8.65□□□□□ -1.02
COLCA1-203ENST00000532918 IGKV3D-20A0A0C4DH25 116 aa8.65□□□□□ -1.02
COLCA1-203ENST00000532918 RNASE2P10153 161 aaKnown RBP8.65□□□□□ -1.02
COLCA1-203ENST00000532918 CST9LQ9H4G1 147 aa8.65□□□□□ -1.02
COLCA1-203ENST00000532918 MYO7BQ6PIF6 2116 aa8.65□□□□□ -1.02
COLCA1-203ENST00000532918 TMEM14EPQ6UXP3 125 aa8.65□□□□□ -1.02
COLCA1-203ENST00000532918 RNASE7Q9H1E1 156 aaKnown RBP8.65□□□□□ -1.02
COLCA1-203ENST00000532918 RNF222A6NCQ9 220 aa8.65□□□□□ -1.03
COLCA1-203ENST00000532918 IGKV1-5P01602 117 aa8.65□□□□□ -1.03
COLCA1-203ENST00000532918 C9orf66Q5T8R8 295 aa8.65□□□□□ -1.03
COLCA1-203ENST00000532918 IL17RELQ6ZVW7 336 aa8.65□□□□□ -1.03
COLCA1-203ENST00000532918 SVIPQ8NHG7 77 aa8.65□□□□□ -1.03
COLCA1-203ENST00000532918 TMEM158Q8WZ71 300 aa8.65□□□□□ -1.03
COLCA1-203ENST00000532918 OVOL2Q9BRP0 275 aa8.65□□□□□ -1.03
COLCA1-203ENST00000532918 SHANK2-AS3Q9BTD1 123 aa8.65□□□□□ -1.03
COLCA1-203ENST00000532918 RNF126Q9BV68 326 aa8.65□□□□□ -1.03
COLCA1-203ENST00000532918 LAMTOR3Q9UHA4 124 aa8.65□□□□□ -1.03
COLCA1-203ENST00000532918 FRMPD3Q5JV73 1810 aa8.64□□□□□ -1.03
COLCA1-203ENST00000532918 SHISA9B4DS77 424 aa8.64□□□□□ -1.03
COLCA1-203ENST00000532918 VCYO14598 125 aa8.64□□□□□ -1.03
COLCA1-203ENST00000532918 TDGF1P3P51864 188 aa8.64□□□□□ -1.03
COLCA1-203ENST00000532918 ERCC8Q13216 396 aa8.64□□□□□ -1.03
COLCA1-203ENST00000532918 TCTEX1D4Q5JR98 221 aa8.64□□□□□ -1.03
COLCA1-203ENST00000532918 Q6ZR03 302 aa8.64□□□□□ -1.03
COLCA1-203ENST00000532918 IFI27L1Q96BM0 104 aa8.64□□□□□ -1.03
COLCA1-203ENST00000532918 DNAJC30Q96LL9 226 aa8.64□□□□□ -1.03
COLCA1-203ENST00000532918 C5orf63A6NC05 138 aa8.64□□□□□ -1.03
COLCA1-203ENST00000532918 CD5LO43866 347 aa8.64□□□□□ -1.03
COLCA1-203ENST00000532918 CDK2AP2O75956 126 aa8.64□□□□□ -1.03
COLCA1-203ENST00000532918 SELENOKQ9Y6D0 94 aa8.64□□□□□ -1.03
COLCA1-203ENST00000532918 EXOC3-AS1Q8N2X6 119 aa8.64□□□□□ -1.03
COLCA1-203ENST00000532918 GATD1Q8NB37 220 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms