RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 FANCD2OSQ96PS1 177 aa11.7□□□□□ -0.54
SSH3-210ENST00000532881 SHANK2-AS3Q9BTD1 123 aa11.7□□□□□ -0.54
SSH3-210ENST00000532881 CHRDL1Q9BU40 450 aa11.7□□□□□ -0.54
SSH3-210ENST00000532881 OR2T8A6NH00 312 aa11.7□□□□□ -0.54
SSH3-210ENST00000532881 GNG7O60262 68 aa11.7□□□□□ -0.54
SSH3-210ENST00000532881 FAM106CPP0CH98 169 aa11.7□□□□□ -0.54
SSH3-210ENST00000532881 FAM106AQ4KMX7 169 aa11.7□□□□□ -0.54
SSH3-210ENST00000532881 ERASQ7Z444 233 aa11.7□□□□□ -0.54
SSH3-210ENST00000532881 BPIFA4PQ86YQ2 179 aa11.7□□□□□ -0.54
SSH3-210ENST00000532881 F8W735 103 aaPredicted RBP11.69□□□□□ -0.54
SSH3-210ENST00000532881 H3BRN7 92 aa11.69□□□□□ -0.54
SSH3-210ENST00000532881 APOHP02749 345 aaPredicted RBP11.69□□□□□ -0.54
SSH3-210ENST00000532881 ZFP36P26651 326 aaKnown RBP11.69□□□□□ -0.54
SSH3-210ENST00000532881 ATP5L2Q7Z4Y8 100 aa11.69□□□□□ -0.54
SSH3-210ENST00000532881 LY6G5BQ8NDX9 201 aa11.69□□□□□ -0.54
SSH3-210ENST00000532881 ZNF414Q96IQ9 312 aa11.69□□□□□ -0.54
SSH3-210ENST00000532881 UQCR10Q9UDW1 63 aa11.69□□□□□ -0.54
SSH3-210ENST00000532881 PSG8Q9UQ74 426 aa11.69□□□□□ -0.54
SSH3-210ENST00000532881 IGKV2-40A0A087WW87 121 aaPredicted RBP11.69□□□□□ -0.54
SSH3-210ENST00000532881 IGKV2D-40P01614 121 aaPredicted RBP11.69□□□□□ -0.54
SSH3-210ENST00000532881 TMUB1Q9BVT8 246 aa11.69□□□□□ -0.54
SSH3-210ENST00000532881 CELSR2Q9HCU4 2923 aa11.68□□□□□ -0.54
SSH3-210ENST00000532881 HIVEP3Q5T1R4 2406 aa11.68□□□□□ -0.54
SSH3-210ENST00000532881 LOC105371242A0A075B767 164 aa11.68□□□□□ -0.54
SSH3-210ENST00000532881 LOC102724200A0A096LPH7 203 aaPredicted RBP11.68□□□□□ -0.54
SSH3-210ENST00000532881 NDUFB8O95169 186 aa11.68□□□□□ -0.54
SSH3-210ENST00000532881 OR4F17Q8NGA8 305 aa11.68□□□□□ -0.54
SSH3-210ENST00000532881 Q8TAT8 98 aa11.68□□□□□ -0.54
SSH3-210ENST00000532881 ZNF492Q9P255 531 aa11.68□□□□□ -0.54
SSH3-210ENST00000532881 LAMTOR2Q9Y2Q5 125 aa11.68□□□□□ -0.54
SSH3-210ENST00000532881 ITPR1Q14643 2758 aa11.68□□□□□ -0.54
SSH3-210ENST00000532881 NPIPB6E9PJ23 425 aa11.68□□□□□ -0.54
SSH3-210ENST00000532881 DLEU1O43261 78 aa11.68□□□□□ -0.54
SSH3-210ENST00000532881 TCTAP57738 103 aa11.68□□□□□ -0.54
SSH3-210ENST00000532881 IGHV3OR16-13A0A075B7E8 117 aa11.67□□□□□ -0.54
SSH3-210ENST00000532881 IGHV3-74A0A0B4J1X5 117 aa11.67□□□□□ -0.54
SSH3-210ENST00000532881 M0QZK8 103 aa11.67□□□□□ -0.54
SSH3-210ENST00000532881 MRPS12O15235 138 aaKnown RBP11.67□□□□□ -0.54
SSH3-210ENST00000532881 LINC00614P0C842 121 aa11.67□□□□□ -0.54
SSH3-210ENST00000532881 TSPOP30536 169 aa11.67□□□□□ -0.54
SSH3-210ENST00000532881 C5orf64Q2M2E5 130 aa11.67□□□□□ -0.54
SSH3-210ENST00000532881 VMO1Q7Z5L0 202 aa11.67□□□□□ -0.54
SSH3-210ENST00000532881 TMEM14CQ9P0S9 112 aa11.67□□□□□ -0.54
SSH3-210ENST00000532881 IGHV3-66A0A0C4DH42 116 aa11.67□□□□□ -0.54
SSH3-210ENST00000532881 C1RLQ9NZP8 487 aa11.67□□□□□ -0.54
SSH3-210ENST00000532881 CRYBG3Q68DQ2 2970 aa11.66□□□□□ -0.54
SSH3-210ENST00000532881 LOC389332A0A1B0GUA5 103 aa11.66□□□□□ -0.54
SSH3-210ENST00000532881 TMEM213A2RRL7 107 aa11.66□□□□□ -0.54
SSH3-210ENST00000532881 OR4C46A6NHA9 309 aa11.66□□□□□ -0.54
SSH3-210ENST00000532881 FOXE3Q13461 319 aa11.66□□□□□ -0.54
SSH3-210ENST00000532881 UNQ5815/PRO19632Q6UWF5 114 aa11.66□□□□□ -0.54
SSH3-210ENST00000532881 TMEM70Q9BUB7 260 aa11.66□□□□□ -0.54
SSH3-210ENST00000532881 SERTM2A0A1B0GWG4 89 aa11.66□□□□□ -0.54
SSH3-210ENST00000532881 LEPROTL1O95214 131 aa11.66□□□□□ -0.54
SSH3-210ENST00000532881 HOXB4P17483 251 aaPredicted RBP11.66□□□□□ -0.54
SSH3-210ENST00000532881 LOXL1Q08397 574 aaPredicted RBP11.66□□□□□ -0.54
SSH3-210ENST00000532881 PSG3Q16557 428 aa11.66□□□□□ -0.54
SSH3-210ENST00000532881 TMEM75Q8N9X5 138 aa11.66□□□□□ -0.54
SSH3-210ENST00000532881 OR11H6Q8NGC7 330 aa11.66□□□□□ -0.54
SSH3-210ENST00000532881 RAB1BQ9H0U4 201 aa11.66□□□□□ -0.54
SSH3-210ENST00000532881 TRAV9-2A0A087WT02 112 aa11.65□□□□□ -0.54
SSH3-210ENST00000532881 SMIM12Q96EX1 92 aa11.65□□□□□ -0.54
SSH3-210ENST00000532881 GOLT1BQ9Y3E0 138 aa11.65□□□□□ -0.54
SSH3-210ENST00000532881 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.65□□□□□ -0.55
SSH3-210ENST00000532881 ARPC1AQ92747 370 aa11.65□□□□□ -0.55
SSH3-210ENST00000532881 IGLV11-55A0A075B6I3 123 aa11.64□□□□□ -0.55
SSH3-210ENST00000532881 A0A1B0GUT8 65 aa11.64□□□□□ -0.55
SSH3-210ENST00000532881 WI2-2373I1.2A0A1W2PRP0 233 aa11.64□□□□□ -0.55
SSH3-210ENST00000532881 LINC01548A6NM66 108 aa11.64□□□□□ -0.55
SSH3-210ENST00000532881 SYS1-DBNDD2H3BUS1 97 aa11.64□□□□□ -0.55
SSH3-210ENST00000532881 SNAI2O43623 268 aa11.64□□□□□ -0.55
SSH3-210ENST00000532881 NDUFA3O95167 84 aa11.64□□□□□ -0.55
SSH3-210ENST00000532881 CT83Q5H943 113 aa11.64□□□□□ -0.55
SSH3-210ENST00000532881 DMRTA1Q5VZB9 504 aa11.64□□□□□ -0.55
SSH3-210ENST00000532881 IGHV3-49A0A0A0MS15 119 aa11.64□□□□□ -0.55
SSH3-210ENST00000532881 PAX2Q02962 417 aa11.64□□□□□ -0.55
SSH3-210ENST00000532881 COL5A1-AS1Q5SY13 56 aa11.64□□□□□ -0.55
SSH3-210ENST00000532881 ODF3BA8MYP8 253 aa11.63□□□□□ -0.55
SSH3-210ENST00000532881 HAX1O00165 279 aa11.63□□□□□ -0.55
SSH3-210ENST00000532881 ZNF80P51504 273 aaPredicted RBP11.63□□□□□ -0.55
SSH3-210ENST00000532881 NPBQ8NG41 125 aa11.63□□□□□ -0.55
SSH3-210ENST00000532881 TIMD4Q96H15 378 aa11.63□□□□□ -0.55
SSH3-210ENST00000532881 VGLL1Q99990 258 aa11.63□□□□□ -0.55
SSH3-210ENST00000532881 NPIPB5A8MRT5 1133 aa11.63□□□□□ -0.55
SSH3-210ENST00000532881 SMKR1H3BMG3 65 aa11.63□□□□□ -0.55
SSH3-210ENST00000532881 NCR2O95944 276 aa11.63□□□□□ -0.55
SSH3-210ENST00000532881 EGR2P11161 476 aaPredicted RBP11.63□□□□□ -0.55
SSH3-210ENST00000532881 PRTN3P24158 256 aa11.63□□□□□ -0.55
SSH3-210ENST00000532881 LYZL1Q6UWQ5 148 aa11.63□□□□□ -0.55
SSH3-210ENST00000532881 GFRA4Q9GZZ7 299 aa11.63□□□□□ -0.55
SSH3-210ENST00000532881 C21orf62Q9NYP8 219 aa11.63□□□□□ -0.55
SSH3-210ENST00000532881 C16orf54Q6UWD8 224 aa11.62□□□□□ -0.55
SSH3-210ENST00000532881 AMN1Q8IY45 258 aa11.62□□□□□ -0.55
SSH3-210ENST00000532881 KLHDC1Q8N7A1 406 aa11.62□□□□□ -0.55
SSH3-210ENST00000532881 SMAD5-AS1Q9Y6J3 95 aa11.62□□□□□ -0.55
SSH3-210ENST00000532881 IFI27P40305 119 aaPredicted RBP11.62□□□□□ -0.55
SSH3-210ENST00000532881 MFAP4P55083 255 aa11.62□□□□□ -0.55
SSH3-210ENST00000532881 ECSCRQ19T08 205 aa11.62□□□□□ -0.55
SSH3-210ENST00000532881 C11orf71Q6IPW1 123 aa11.62□□□□□ -0.55
SSH3-210ENST00000532881 NEU4Q8WWR8 484 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms