RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 TRPT1Q86TN4 253 aaKnown RBP18.25■□□□□ 0.51
USP48-214ENST00000532737 KIR2DL5AQ8N109 375 aa18.25■□□□□ 0.51
USP48-214ENST00000532737 OR2G3Q8NGZ4 309 aa18.25■□□□□ 0.51
USP48-214ENST00000532737 KIR2DL5BQ8NHK3 375 aa18.25■□□□□ 0.51
USP48-214ENST00000532737 LRRC20Q8TCA0 184 aa18.25■□□□□ 0.51
USP48-214ENST00000532737 PSMG3Q9BT73 122 aaPredicted RBP18.25■□□□□ 0.51
USP48-214ENST00000532737 RETNQ9HD89 108 aa18.25■□□□□ 0.51
USP48-214ENST00000532737 ZNF586Q9NXT0 402 aa18.25■□□□□ 0.51
USP48-214ENST00000532737 PYYP10082 97 aa18.24■□□□□ 0.51
USP48-214ENST00000532737 HLA-DMBP28068 263 aa18.24■□□□□ 0.51
USP48-214ENST00000532737 ACOT6Q3I5F7 207 aaPredicted RBP18.24■□□□□ 0.51
USP48-214ENST00000532737 LCN15Q6UWW0 184 aa18.24■□□□□ 0.51
USP48-214ENST00000532737 SPATA25Q9BR10 227 aa18.24■□□□□ 0.51
USP48-214ENST00000532737 ZMAT4Q9H898 229 aa18.24■□□□□ 0.51
USP48-214ENST00000532737 AGRNO00468 2067 aa18.24■□□□□ 0.51
USP48-214ENST00000532737 H3BMM0 161 aa18.23■□□□□ 0.51
USP48-214ENST00000532737 SLC17A3O00476 420 aa18.23■□□□□ 0.51
USP48-214ENST00000532737 M6PRP20645 277 aa18.23■□□□□ 0.51
USP48-214ENST00000532737 AKAP14Q86UN6 197 aa18.23■□□□□ 0.51
USP48-214ENST00000532737 SAT2Q96F10 170 aaPredicted RBP18.23■□□□□ 0.51
USP48-214ENST00000532737 CSTL1Q9H114 145 aa18.23■□□□□ 0.51
USP48-214ENST00000532737 ZNF331Q9NQX6 463 aaPredicted RBP18.23■□□□□ 0.51
USP48-214ENST00000532737 RPRMQ9NS64 109 aa18.23■□□□□ 0.51
USP48-214ENST00000532737 U3KQK5 164 aa18.23■□□□□ 0.51
USP48-214ENST00000532737 F6UB75 175 aa18.22■□□□□ 0.51
USP48-214ENST00000532737 EIF3GO75821 320 aaKnown RBP eCLIP18.22■□□□□ 0.51
USP48-214ENST00000532737 JTBO76095 146 aa18.22■□□□□ 0.51
USP48-214ENST00000532737 HIST1H1EP10412 219 aaKnown RBP18.22■□□□□ 0.51
USP48-214ENST00000532737 HLA-DRB4P13762 266 aa18.22■□□□□ 0.51
USP48-214ENST00000532737 RHOBP62745 196 aa18.22■□□□□ 0.51
USP48-214ENST00000532737 FOXI2Q6ZQN5 318 aa18.22■□□□□ 0.51
USP48-214ENST00000532737 GNPNAT1Q96EK6 184 aaPredicted RBP18.22■□□□□ 0.51
USP48-214ENST00000532737 ARPC5LQ9BPX5 153 aa18.22■□□□□ 0.51
USP48-214ENST00000532737 SAV1Q9H4B6 383 aaPredicted RBP18.22■□□□□ 0.51
USP48-214ENST00000532737 HLA-DRB4X5D2U9 266 aa18.22■□□□□ 0.51
USP48-214ENST00000532737 A0A0D9SG52 128 aa18.21■□□□□ 0.51
USP48-214ENST00000532737 UBE2CO00762 179 aa18.21■□□□□ 0.51
USP48-214ENST00000532737 PSG3Q16557 428 aa18.21■□□□□ 0.51
USP48-214ENST00000532737 GUK1Q16774 197 aa18.21■□□□□ 0.51
USP48-214ENST00000532737 OR10G4Q8NGN3 311 aa18.21■□□□□ 0.51
USP48-214ENST00000532737 OR10G9Q8NGN4 311 aa18.21■□□□□ 0.51
USP48-214ENST00000532737 OR10G7Q8NGN6 311 aa18.21■□□□□ 0.51
USP48-214ENST00000532737 RCHY1Q96PM5 261 aa18.21■□□□□ 0.51
USP48-214ENST00000532737 SLC50A1Q9BRV3 221 aa18.21■□□□□ 0.51
USP48-214ENST00000532737 OR51M1Q9H341 326 aa18.21■□□□□ 0.51
USP48-214ENST00000532737 SERF2P84101 59 aa18.2■□□□□ 0.5
USP48-214ENST00000532737 CD300CQ08708 224 aa18.2■□□□□ 0.5
USP48-214ENST00000532737 FAM122CQ6P4D5 195 aa18.2■□□□□ 0.5
USP48-214ENST00000532737 ZNF503Q96F45 646 aa18.2■□□□□ 0.5
USP48-214ENST00000532737 TRBV19A0A075B6N1 114 aa18.19■□□□□ 0.5
USP48-214ENST00000532737 A0A0J9YX75 114 aa18.19■□□□□ 0.5
USP48-214ENST00000532737 Q6ZWC4 215 aa18.19■□□□□ 0.5
USP48-214ENST00000532737 ZNF738Q8NE65 137 aa18.19■□□□□ 0.5
USP48-214ENST00000532737 PAXXQ9BUH6 204 aa18.19■□□□□ 0.5
USP48-214ENST00000532737 RYR3Q15413 4870 aa18.18■□□□□ 0.5
USP48-214ENST00000532737 NDUFB4O95168 129 aa18.18■□□□□ 0.5
USP48-214ENST00000532737 C1QBP02746 253 aa18.18■□□□□ 0.5
USP48-214ENST00000532737 GIG44P09565 113 aaPredicted RBP18.18■□□□□ 0.5
USP48-214ENST00000532737 OR10J4P0C629 311 aa18.18■□□□□ 0.5
USP48-214ENST00000532737 EBLN2Q6P2I7 272 aa18.18■□□□□ 0.5
USP48-214ENST00000532737 RPP25LQ8N5L8 163 aaKnown RBP18.18■□□□□ 0.5
USP48-214ENST00000532737 RNF141Q8WVD5 230 aa18.18■□□□□ 0.5
USP48-214ENST00000532737 FXYD5Q96DB9 178 aa18.18■□□□□ 0.5
USP48-214ENST00000532737 OVOL2Q9BRP0 275 aa18.18■□□□□ 0.5
USP48-214ENST00000532737 A0A1W2PPV4 95 aa18.17■□□□□ 0.5
USP48-214ENST00000532737 BCL2L11O43521 198 aa18.17■□□□□ 0.5
USP48-214ENST00000532737 OR7C2O60412 319 aa18.17■□□□□ 0.5
USP48-214ENST00000532737 ZNF253O75346 499 aa18.17■□□□□ 0.5
USP48-214ENST00000532737 IGKV3-20P01619 116 aa18.17■□□□□ 0.5
USP48-214ENST00000532737 NBEAP1P0C6P0 100 aa18.17■□□□□ 0.5
USP48-214ENST00000532737 PRB4P10163 310 aaPredicted RBP18.17■□□□□ 0.5
USP48-214ENST00000532737 DEFB135Q30KP9 77 aa18.17■□□□□ 0.5
USP48-214ENST00000532737 TMUB2Q71RG4 321 aa18.17■□□□□ 0.5
USP48-214ENST00000532737 BLNKQ8WV28 456 aa18.17■□□□□ 0.5
USP48-214ENST00000532737 STAB2Q8WWQ8 2551 aa18.17■□□□□ 0.5
USP48-214ENST00000532737 CA1P00915 261 aaPredicted RBP18.16■□□□□ 0.5
USP48-214ENST00000532737 MBP02144 154 aa18.16■□□□□ 0.5
USP48-214ENST00000532737 ZNF705DP0CH99 300 aaPredicted RBP18.16■□□□□ 0.5
USP48-214ENST00000532737 ZNF705BP0CI00 300 aaPredicted RBP18.16■□□□□ 0.5
USP48-214ENST00000532737 SPP1P10451 314 aa18.16■□□□□ 0.5
USP48-214ENST00000532737 C4BPBP20851 252 aa18.16■□□□□ 0.5
USP48-214ENST00000532737 TAS2R45P59539 299 aa18.16■□□□□ 0.5
USP48-214ENST00000532737 LGALSLQ3ZCW2 172 aaPredicted RBP18.16■□□□□ 0.5
USP48-214ENST00000532737 KHDC3LQ587J8 217 aa18.16■□□□□ 0.5
USP48-214ENST00000532737 MORN3Q6PF18 240 aaPredicted RBP18.16■□□□□ 0.5
USP48-214ENST00000532737 OR4B1Q8NGF8 309 aa18.16■□□□□ 0.5
USP48-214ENST00000532737 KANTRA0A1W2PQU2 76 aa18.15■□□□□ 0.5
USP48-214ENST00000532737 ZNF705FA8MVS1 300 aaPredicted RBP18.15■□□□□ 0.5
USP48-214ENST00000532737 HMGB3O15347 200 aaKnown RBP18.15■□□□□ 0.5
USP48-214ENST00000532737 RPUSD4Q96CM3 377 aaKnown RBP18.15■□□□□ 0.5
USP48-214ENST00000532737 RNF183Q96D59 192 aa18.15■□□□□ 0.5
USP48-214ENST00000532737 WWC2-AS2Q96NR7 200 aa18.15■□□□□ 0.5
USP48-214ENST00000532737 CLUHP3Q96NS8 147 aa18.15■□□□□ 0.5
USP48-214ENST00000532737 SPRY2O43597 315 aa18.14■□□□□ 0.49
USP48-214ENST00000532737 CDC34P49427 236 aaPredicted RBP18.14■□□□□ 0.49
USP48-214ENST00000532737 UBE2L3P68036 154 aaKnown RBP18.14■□□□□ 0.49
USP48-214ENST00000532737 PDE6HQ13956 83 aa18.14■□□□□ 0.49
USP48-214ENST00000532737 TMEM41BQ5BJD5 291 aa18.14■□□□□ 0.49
USP48-214ENST00000532737 ZNF471Q9BX82 626 aaPredicted RBP18.14■□□□□ 0.49
USP48-214ENST00000532737 CLEC5AQ9NY25 188 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms