RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 TCTE3Q8IZS6 198 aa13.69□□□□□ -0.22
SSH3-209ENST00000532600 RPP25LQ8N5L8 163 aaKnown RBP13.69□□□□□ -0.22
SSH3-209ENST00000532600 INO80EQ8NBZ0 244 aaPredicted RBP13.69□□□□□ -0.22
SSH3-209ENST00000532600 MFFQ9GZY8 342 aa13.69□□□□□ -0.22
SSH3-209ENST00000532600 ARV1Q9H2C2 271 aa13.69□□□□□ -0.22
SSH3-209ENST00000532600 SLC25A32Q9H2D1 315 aa13.69□□□□□ -0.22
SSH3-209ENST00000532600 FRAS1Q86XX4 4008 aa13.69□□□□□ -0.22
SSH3-209ENST00000532600 DNAH10Q8IVF4 4471 aa13.68□□□□□ -0.22
SSH3-209ENST00000532600 NUP62P37198 522 aaPredicted RBP13.68□□□□□ -0.22
SSH3-209ENST00000532600 SNRPD3P62318 126 aaKnown RBP13.68□□□□□ -0.22
SSH3-209ENST00000532600 C1orf194Q5T5A4 169 aa13.68□□□□□ -0.22
SSH3-209ENST00000532600 PPP1R14BQ96C90 147 aa13.68□□□□□ -0.22
SSH3-209ENST00000532600 PARD6GQ9BYG4 376 aaPredicted RBP13.68□□□□□ -0.22
SSH3-209ENST00000532600 COX7A2P2O60397 106 aa13.67□□□□□ -0.22
SSH3-209ENST00000532600 IFNA5P01569 189 aa13.67□□□□□ -0.22
SSH3-209ENST00000532600 HLA-DRB4P13762 266 aa13.67□□□□□ -0.22
SSH3-209ENST00000532600 MIFP14174 115 aa13.67□□□□□ -0.22
SSH3-209ENST00000532600 PXDC1Q5TGL8 231 aa13.67□□□□□ -0.22
SSH3-209ENST00000532600 HRH4Q9H3N8 390 aa13.67□□□□□ -0.22
SSH3-209ENST00000532600 SLC25A22Q9H936 323 aa13.67□□□□□ -0.22
SSH3-209ENST00000532600 HLA-DRB4X5D2U9 266 aa13.67□□□□□ -0.22
SSH3-209ENST00000532600 HMSDA8MTL9 139 aa13.66□□□□□ -0.22
SSH3-209ENST00000532600 CXCL2P19875 107 aa13.66□□□□□ -0.22
SSH3-209ENST00000532600 RPL7L1Q6DKI1 246 aaKnown RBP13.66□□□□□ -0.22
SSH3-209ENST00000532600 LGALS9CQ6DKI2 356 aa13.66□□□□□ -0.22
SSH3-209ENST00000532600 LINC00305Q7Z4B0 112 aa13.66□□□□□ -0.22
SSH3-209ENST00000532600 DNAJC4Q9NNZ3 241 aa13.66□□□□□ -0.22
SSH3-209ENST00000532600 CYTL1Q9NRR1 136 aa13.66□□□□□ -0.22
SSH3-209ENST00000532600 TRAV5A0A0B4J249 113 aa13.65□□□□□ -0.22
SSH3-209ENST00000532600 MRPS12O15235 138 aaKnown RBP13.65□□□□□ -0.22
SSH3-209ENST00000532600 C10orf113Q5VZT2 155 aa13.65□□□□□ -0.22
SSH3-209ENST00000532600 Q6ZRG5 221 aa13.65□□□□□ -0.22
SSH3-209ENST00000532600 OR8I2Q8N0Y5 310 aa13.65□□□□□ -0.22
SSH3-209ENST00000532600 SCGB1C1Q8TD33 95 aa13.65□□□□□ -0.22
SSH3-209ENST00000532600 XCL2Q9UBD3 114 aa13.65□□□□□ -0.22
SSH3-209ENST00000532600 PFDN2Q9UHV9 154 aa13.65□□□□□ -0.22
SSH3-209ENST00000532600 CELA1Q9UNI1 258 aa13.65□□□□□ -0.22
SSH3-209ENST00000532600 HLA-DMBP28068 263 aa13.64□□□□□ -0.23
SSH3-209ENST00000532600 SPATA31B1PQ5VZV4 182 aa13.64□□□□□ -0.23
SSH3-209ENST00000532600 AKAP14Q86UN6 197 aa13.64□□□□□ -0.23
SSH3-209ENST00000532600 KCNRGQ8N5I3 272 aa13.64□□□□□ -0.23
SSH3-209ENST00000532600 ZNF709Q8N972 641 aa13.64□□□□□ -0.23
SSH3-209ENST00000532600 C2CD4CQ8TF44 421 aa13.64□□□□□ -0.23
SSH3-209ENST00000532600 C20orf173Q96LM9 149 aa13.64□□□□□ -0.23
SSH3-209ENST00000532600 LINC00052Q96N35 136 aa13.64□□□□□ -0.23
SSH3-209ENST00000532600 SAV1Q9H4B6 383 aaPredicted RBP13.64□□□□□ -0.23
SSH3-209ENST00000532600 APLNQ9ULZ1 77 aa13.64□□□□□ -0.23
SSH3-209ENST00000532600 PSMB3P49720 205 aa13.63□□□□□ -0.23
SSH3-209ENST00000532600 ZNF266Q14584 549 aa13.63□□□□□ -0.23
SSH3-209ENST00000532600 Q6ZTC4 211 aa13.63□□□□□ -0.23
SSH3-209ENST00000532600 HSD17B11Q8NBQ5 300 aa13.63□□□□□ -0.23
SSH3-209ENST00000532600 OR1L4Q8NGR5 311 aa13.63□□□□□ -0.23
SSH3-209ENST00000532600 SH3BGRL3Q9H299 93 aa13.63□□□□□ -0.23
SSH3-209ENST00000532600 DNAH6Q9C0G6 4158 aa13.62□□□□□ -0.23
SSH3-209ENST00000532600 C17orf112F2Z3M2 114 aa13.62□□□□□ -0.23
SSH3-209ENST00000532600 F6UB75 175 aa13.62□□□□□ -0.23
SSH3-209ENST00000532600 IGKV3-20P01619 116 aa13.62□□□□□ -0.23
SSH3-209ENST00000532600 ATP6V0CP27449 155 aa13.62□□□□□ -0.23
SSH3-209ENST00000532600 FXYD7P58549 80 aa13.62□□□□□ -0.23
SSH3-209ENST00000532600 ZNF345Q14585 488 aa13.62□□□□□ -0.23
SSH3-209ENST00000532600 FFAR4Q5NUL3 377 aa13.62□□□□□ -0.23
SSH3-209ENST00000532600 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.62□□□□□ -0.23
SSH3-209ENST00000532600 ZNF705AQ6ZN79 300 aaPredicted RBP13.62□□□□□ -0.23
SSH3-209ENST00000532600 C1QBP02746 253 aa13.61□□□□□ -0.23
SSH3-209ENST00000532600 C12orf74Q32Q52 190 aa13.61□□□□□ -0.23
SSH3-209ENST00000532600 FOXI2Q6ZQN5 318 aa13.61□□□□□ -0.23
SSH3-209ENST00000532600 ZNF767PQ75MW2 155 aa13.61□□□□□ -0.23
SSH3-209ENST00000532600 MIR17HGQ75NE6 70 aa13.61□□□□□ -0.23
SSH3-209ENST00000532600 PFDN5Q99471 154 aa13.61□□□□□ -0.23
SSH3-209ENST00000532600 KCNIP2Q9NS61 270 aa13.61□□□□□ -0.23
SSH3-209ENST00000532600 TIMM9Q9Y5J7 89 aa13.61□□□□□ -0.23
SSH3-209ENST00000532600 ZNF705FA8MVS1 300 aaPredicted RBP13.6□□□□□ -0.23
SSH3-209ENST00000532600 IGLL5B9A064 214 aa13.6□□□□□ -0.23
SSH3-209ENST00000532600 C11orf94C9JXX5 98 aa13.6□□□□□ -0.23
SSH3-209ENST00000532600 EIF3GO75821 320 aaKnown RBP eCLIP13.6□□□□□ -0.23
SSH3-209ENST00000532600 SNRPCP09234 159 aaKnown RBP13.6□□□□□ -0.23
SSH3-209ENST00000532600 ZNF705DP0CH99 300 aaPredicted RBP13.6□□□□□ -0.23
SSH3-209ENST00000532600 ZNF705BP0CI00 300 aaPredicted RBP13.6□□□□□ -0.23
SSH3-209ENST00000532600 ID1P41134 155 aa13.6□□□□□ -0.23
SSH3-209ENST00000532600 GALR1P47211 349 aa13.6□□□□□ -0.23
SSH3-209ENST00000532600 FAM167A-AS1Q96KT0 104 aa13.6□□□□□ -0.23
SSH3-209ENST00000532600 CLUHP3Q96NS8 147 aa13.6□□□□□ -0.23
SSH3-209ENST00000532600 C1QTNF4Q9BXJ3 329 aa13.6□□□□□ -0.23
SSH3-209ENST00000532600 ISLRO14498 428 aa13.59□□□□□ -0.23
SSH3-209ENST00000532600 RPL7P18124 248 aaKnown RBP13.59□□□□□ -0.23
SSH3-209ENST00000532600 S100A7P31151 101 aa13.59□□□□□ -0.23
SSH3-209ENST00000532600 RAB2AP61019 212 aa13.59□□□□□ -0.23
SSH3-209ENST00000532600 NUTF2P61970 127 aaKnown RBP13.59□□□□□ -0.23
SSH3-209ENST00000532600 LGALSLQ3ZCW2 172 aaPredicted RBP13.59□□□□□ -0.23
SSH3-209ENST00000532600 FAM78BQ5VT40 261 aa13.59□□□□□ -0.23
SSH3-209ENST00000532600 GPR82Q96P67 336 aa13.59□□□□□ -0.23
SSH3-209ENST00000532600 SLC25A2Q9BXI2 301 aa13.59□□□□□ -0.23
SSH3-209ENST00000532600 SLC35B3Q9H1N7 401 aa13.59□□□□□ -0.23
SSH3-209ENST00000532600 A0A087X0K7 114 aa13.58□□□□□ -0.24
SSH3-209ENST00000532600 TRAV8-2A0A0B4J237 113 aa13.58□□□□□ -0.24
SSH3-209ENST00000532600 A0A0J9YX75 114 aa13.58□□□□□ -0.24
SSH3-209ENST00000532600 H3BQ15 152 aa13.58□□□□□ -0.24
SSH3-209ENST00000532600 H3BTX0 84 aa13.58□□□□□ -0.24
SSH3-209ENST00000532600 TAAR5O14804 337 aa13.58□□□□□ -0.24
SSH3-209ENST00000532600 IGLC2P0DOY2 106 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms