RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 FOXH1O75593 365 aa5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 DKK1O94907 266 aa5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 EVI2AP22794 236 aa5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 B3GALT5-AS1P59052 145 aa5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 MZT1Q08AG7 82 aa5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 PSG7Q13046 419 aa5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 KLF17Q5JT82 389 aaPredicted RBP5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 LRRC29Q8WV35 223 aa5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 BBC3Q96PG8 261 aaPredicted RBP5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 MGST2Q99735 147 aa5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 SLC25A2Q9BXI2 301 aa5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 NPIPB5A8MRT5 1133 aa5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 FOXI3A8MTJ6 420 aaPredicted RBP5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 IGKCP01834 107 aa5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 CD3EP07766 207 aa5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 IGHV1-2P23083 117 aa5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 Q6ZS49 121 aa5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 PPP1R27Q86WC6 154 aa5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 C20orf78Q9BR46 151 aa5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 IDI2-AS1Q9NZ38 188 aa5.55□□□□□ -1.52
TGFBR3-209ENST00000532540 RELNP78509 3460 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 SETXQ7Z333 2677 aaKnown RBP5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 IGKV1-27A0A075B6S5 117 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 C5orf63A6NC05 138 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 ATP5LO75964 103 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 RPL32P62910 135 aaKnown RBP5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 C9orf153Q5TBE3 101 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 KIR3DL3Q8N743 410 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 WDR31Q8NA23 367 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 TEX45Q8NA69 505 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 WIPF2Q8TF74 440 aaPredicted RBP5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 RAX2Q96IS3 184 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 JMJD8Q96S16 334 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 SPATA25Q9BR10 227 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 C1RLQ9NZP8 487 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 HIVEP2P31629 2446 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 hCG_38984A0A1B0GV85 526 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 LYNX1G3V0Z9 82 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 COX6CP09669 75 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 ZNF688P0C7X2 276 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 LYNX1P0DP58 116 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 LGALS9BQ3B8N2 356 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 LINC01545Q5VT33 79 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 LGALS9CQ6DKI2 356 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 UFSP1Q6NVU6 142 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 GTSCR1Q86UQ5 136 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 CACNG8Q8WXS5 425 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 NRGNQ92686 78 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 COQ2Q96H96 371 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 SPANXB1Q9NS25 103 aaPredicted RBP5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 KMT2EQ8IZD2 1858 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 M0R3E3 92 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 OR2H2O95918 312 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 FOXI1Q12951 378 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 C10orf128Q5T292 105 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 FBXL15Q9H469 300 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 ONECUT1Q9UBC0 465 aa5.54□□□□□ -1.52
TGFBR3-209ENST00000532540 WNK1Q9H4A3 2382 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 C15orf62A8K5M9 175 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 COX6B1P14854 86 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 DLX1P56177 255 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 PRB3Q04118 309 aaPredicted RBP5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 ZNF718Q3SXZ3 478 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 C5orf47Q569G3 176 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 ZC2HC1BQ5TFG8 222 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 EPDR1Q9UM22 224 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 MOSP00540 346 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 FAM201AQ5SY85 155 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 Q6AWC8 147 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 ZNF474Q6S9Z5 364 aaPredicted RBP5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 ZNF826PQ6ZT77 177 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 Q6ZUT4 128 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 FAM215AQ9Y5M1 114 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 MALRD1Q5VYJ5 2156 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 IGLL5B9A064 214 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 FNDC10F2Z333 226 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 MT-ATP8P03928 68 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 GNG5P63218 68 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 HOXA4Q00056 320 aaPredicted RBP5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 BSPH1Q075Z2 132 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 SLC25A48Q6ZT89 311 aaKnown RBP5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 VKORC1L1Q8N0U8 176 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 CITED2Q99967 270 aaPredicted RBP5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 ZNF747Q9BV97 191 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 TMEM126AQ9H061 195 aa5.53□□□□□ -1.52
TGFBR3-209ENST00000532540 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 IGKV1-39P01597 117 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 IGKV1D-39P04432 117 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 FAM231DQ6ZW35 169 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 PCP2Q8IVA1 136 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 OR10J6PQ8NGY7 276 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 FAM110AQ9BQ89 295 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 PIMREGQ9BSJ6 248 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 CECR9P0C854 216 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 CD24P25063 80 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 C12orf74Q32Q52 190 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 NRN1LQ496H8 165 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 TMEM155Q4W5P6 130 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 ASCL4Q6XD76 172 aa5.52□□□□□ -1.53
TGFBR3-209ENST00000532540 Q6ZT83 130 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms