RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 H2AFB1P0C5Y9 115 aa12.52□□□□□ -0.41
PKP3-208ENST00000531857 MIFP14174 115 aa12.52□□□□□ -0.41
PKP3-208ENST00000531857 M6PRP20645 277 aa12.52□□□□□ -0.41
PKP3-208ENST00000531857 SUB1P53999 127 aaKnown RBP eCLIP12.52□□□□□ -0.41
PKP3-208ENST00000531857 ERHP84090 104 aaKnown RBP12.52□□□□□ -0.41
PKP3-208ENST00000531857 RAB31Q13636 194 aa12.52□□□□□ -0.41
PKP3-208ENST00000531857 TMEM182Q6ZP80 229 aaPredicted RBP12.52□□□□□ -0.41
PKP3-208ENST00000531857 TRPT1Q86TN4 253 aaKnown RBP12.52□□□□□ -0.41
PKP3-208ENST00000531857 SEC11CQ9BY50 192 aa12.52□□□□□ -0.41
PKP3-208ENST00000531857 DNAH2Q9P225 4427 aa12.51□□□□□ -0.41
PKP3-208ENST00000531857 KNCNA6PVL3 124 aa12.51□□□□□ -0.41
PKP3-208ENST00000531857 SNCAP37840 140 aa12.51□□□□□ -0.41
PKP3-208ENST00000531857 SPINK9Q5DT21 86 aa12.51□□□□□ -0.41
PKP3-208ENST00000531857 OR8G2PQ6IF36 304 aa12.51□□□□□ -0.41
PKP3-208ENST00000531857 CLEC5AQ9NY25 188 aa12.51□□□□□ -0.41
PKP3-208ENST00000531857 K7EQG2 157 aa12.5□□□□□ -0.41
PKP3-208ENST00000531857 MED14OSP0DP75 135 aa12.5□□□□□ -0.41
PKP3-208ENST00000531857 NPY1RP25929 384 aa12.5□□□□□ -0.41
PKP3-208ENST00000531857 TMEM41BQ5BJD5 291 aa12.5□□□□□ -0.41
PKP3-208ENST00000531857 ZNF600Q6ZNG1 722 aa12.5□□□□□ -0.41
PKP3-208ENST00000531857 SVBPQ8N300 66 aa12.5□□□□□ -0.41
PKP3-208ENST00000531857 SLC24A4Q8NFF2 622 aa12.5□□□□□ -0.41
PKP3-208ENST00000531857 FAM213BQ8TBF2 198 aa12.5□□□□□ -0.41
PKP3-208ENST00000531857 MBD3L1Q8WWY6 194 aa12.5□□□□□ -0.41
PKP3-208ENST00000531857 NPVFQ9HCQ7 196 aa12.5□□□□□ -0.41
PKP3-208ENST00000531857 TREM1Q9NP99 234 aa12.5□□□□□ -0.41
PKP3-208ENST00000531857 CELA1Q9UNI1 258 aa12.5□□□□□ -0.41
PKP3-208ENST00000531857 DNAH17Q9UFH2 4485 aa12.49□□□□□ -0.41
PKP3-208ENST00000531857 RTL8CO15255 209 aa12.49□□□□□ -0.41
PKP3-208ENST00000531857 NPBWR1P48145 328 aa12.49□□□□□ -0.41
PKP3-208ENST00000531857 ARL16Q0P5N6 197 aa12.49□□□□□ -0.41
PKP3-208ENST00000531857 C2orf83Q53S99 150 aa12.49□□□□□ -0.41
PKP3-208ENST00000531857 C10orf91Q5T1B1 145 aa12.49□□□□□ -0.41
PKP3-208ENST00000531857 PVRIGQ6DKI7 326 aa12.49□□□□□ -0.41
PKP3-208ENST00000531857 MORN3Q6PF18 240 aaPredicted RBP12.49□□□□□ -0.41
PKP3-208ENST00000531857 CSNK1G2-AS1Q8NCQ2 148 aa12.49□□□□□ -0.41
PKP3-208ENST00000531857 BPIFCQ8NFQ6 507 aa12.49□□□□□ -0.41
PKP3-208ENST00000531857 STXBP6Q8NFX7 210 aa12.49□□□□□ -0.41
PKP3-208ENST00000531857 NARS2Q96I59 477 aaKnown RBP12.49□□□□□ -0.41
PKP3-208ENST00000531857 SCRT1Q9BWW7 348 aa12.49□□□□□ -0.41
PKP3-208ENST00000531857 SH3BGRL3Q9H299 93 aa12.49□□□□□ -0.41
PKP3-208ENST00000531857 WDR83OSQ9Y284 106 aa12.49□□□□□ -0.41
PKP3-208ENST00000531857 CARHSP1Q9Y2V2 147 aaKnown RBP12.49□□□□□ -0.41
PKP3-208ENST00000531857 PRSS29PA6NIE9 313 aa12.48□□□□□ -0.41
PKP3-208ENST00000531857 IFNA1P01562 189 aa12.48□□□□□ -0.41
PKP3-208ENST00000531857 ZNF688P0C7X2 276 aa12.48□□□□□ -0.41
PKP3-208ENST00000531857 GPX4P36969 197 aaPredicted RBP12.48□□□□□ -0.41
PKP3-208ENST00000531857 PPT1P50897 306 aa12.48□□□□□ -0.41
PKP3-208ENST00000531857 C12orf74Q32Q52 190 aa12.48□□□□□ -0.41
PKP3-208ENST00000531857 LINC00052Q96N35 136 aa12.48□□□□□ -0.41
PKP3-208ENST00000531857 PLA2G2EQ9NZK7 142 aa12.48□□□□□ -0.41
PKP3-208ENST00000531857 MRPL36Q9P0J6 103 aaKnown RBP12.48□□□□□ -0.41
PKP3-208ENST00000531857 UBE2L5PA0A1B0GUS4 154 aa12.47□□□□□ -0.41
PKP3-208ENST00000531857 M0R2N4 97 aa12.47□□□□□ -0.41
PKP3-208ENST00000531857 FGF7P21781 194 aa12.47□□□□□ -0.41
PKP3-208ENST00000531857 NPPCP23582 126 aa12.47□□□□□ -0.41
PKP3-208ENST00000531857 GUK1Q16774 197 aa12.47□□□□□ -0.41
PKP3-208ENST00000531857 ACOT6Q3I5F7 207 aaPredicted RBP12.47□□□□□ -0.41
PKP3-208ENST00000531857 ACTL10Q5JWF8 245 aa12.47□□□□□ -0.41
PKP3-208ENST00000531857 POM121L12Q8N7R1 296 aa12.47□□□□□ -0.41
PKP3-208ENST00000531857 GRAMD2BQ96HH9 432 aa12.47□□□□□ -0.41
PKP3-208ENST00000531857 TMEM231Q9H6L2 316 aa12.47□□□□□ -0.41
PKP3-208ENST00000531857 PKD1P98161 4303 aa12.47□□□□□ -0.41
PKP3-208ENST00000531857 DEFB131BA0A096LNP1 70 aa12.46□□□□□ -0.41
PKP3-208ENST00000531857 F8W036 122 aa12.46□□□□□ -0.41
PKP3-208ENST00000531857 SNAPINO95295 136 aa12.46□□□□□ -0.41
PKP3-208ENST00000531857 AMBPP02760 352 aa12.46□□□□□ -0.41
PKP3-208ENST00000531857 OPRK1P41145 380 aa12.46□□□□□ -0.41
PKP3-208ENST00000531857 MLANAQ16655 118 aa12.46□□□□□ -0.41
PKP3-208ENST00000531857 BSXQ3C1V8 233 aa12.46□□□□□ -0.41
PKP3-208ENST00000531857 RNASEH2CQ8TDP1 164 aaKnown RBP12.46□□□□□ -0.41
PKP3-208ENST00000531857 DCANP1Q8TF63 244 aa12.46□□□□□ -0.41
PKP3-208ENST00000531857 ACTR3CQ9C0K3 210 aaPredicted RBP12.46□□□□□ -0.41
PKP3-208ENST00000531857 A0A1W2PS18 150 aa12.45□□□□□ -0.42
PKP3-208ENST00000531857 CORTO00230 105 aa12.45□□□□□ -0.42
PKP3-208ENST00000531857 CRYBB3P26998 211 aa12.45□□□□□ -0.42
PKP3-208ENST00000531857 KHDC3LQ587J8 217 aa12.45□□□□□ -0.42
PKP3-208ENST00000531857 ETFRF1Q6IPR1 90 aa12.45□□□□□ -0.42
PKP3-208ENST00000531857 OR10G4Q8NGN3 311 aa12.45□□□□□ -0.42
PKP3-208ENST00000531857 METTL26Q96S19 204 aa12.45□□□□□ -0.42
PKP3-208ENST00000531857 NPCDR1Q9BY65 106 aa12.45□□□□□ -0.42
PKP3-208ENST00000531857 EIF5A2Q9GZV4 153 aaKnown RBP12.45□□□□□ -0.42
PKP3-208ENST00000531857 FNDC4Q9H6D8 234 aaPredicted RBP12.45□□□□□ -0.42
PKP3-208ENST00000531857 SLC39A9Q9NUM3 307 aa12.45□□□□□ -0.42
PKP3-208ENST00000531857 CTXND1A0A1B0GTU2 59 aa12.44□□□□□ -0.42
PKP3-208ENST00000531857 PRSS46E5RG02 174 aa12.44□□□□□ -0.42
PKP3-208ENST00000531857 APOC3P02656 99 aa12.44□□□□□ -0.42
PKP3-208ENST00000531857 RNASE2P10153 161 aaKnown RBP12.44□□□□□ -0.42
PKP3-208ENST00000531857 TEPPQ6URK8 271 aa12.44□□□□□ -0.42
PKP3-208ENST00000531857 SUN5Q8TC36 379 aa12.44□□□□□ -0.42
PKP3-208ENST00000531857 SFT2D1Q8WV19 159 aa12.44□□□□□ -0.42
PKP3-208ENST00000531857 SLC35B3Q9H1N7 401 aa12.44□□□□□ -0.42
PKP3-208ENST00000531857 RPRMQ9NS64 109 aa12.44□□□□□ -0.42
PKP3-208ENST00000531857 RBFOX3A6NFN3 312 aa12.43□□□□□ -0.42
PKP3-208ENST00000531857 CLN5O75503 358 aa12.43□□□□□ -0.42
PKP3-208ENST00000531857 P0DMU3 169 aa12.43□□□□□ -0.42
PKP3-208ENST00000531857 FAM231AP0DMU4 169 aa12.43□□□□□ -0.42
PKP3-208ENST00000531857 FAM231CP0DMU5 169 aa12.43□□□□□ -0.42
PKP3-208ENST00000531857 TXNDC17Q9BRA2 123 aa12.43□□□□□ -0.42
PKP3-208ENST00000531857 RSG1Q9BU20 258 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms