RNA–Protein interactions for RNA: ENST00000531141.1

CD44-233, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-233ENST00000531141 BHLHE40O14503 412 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 ATG12O94817 140 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 MT-CO2P00403 227 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 IFNA21P01568 189 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 HMGN1P05114 100 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 SULT1A3P0DMM9 295 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 SULT1A4P0DMN0 295 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 IGHV3-30-3P0DP02 117 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 CXCL2P19875 107 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 CXCL3P19876 107 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 GABRA3P34903 492 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 OPRM1P35372 400 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 HSPA9P38646 679 aaKnown RBP1.25□□□□□ -2.21
CD44-233ENST00000531141 PSMB3P49720 205 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 UBA52P62987 128 aaKnown RBP1.25□□□□□ -2.21
CD44-233ENST00000531141 TMEM267Q0VDI3 215 aaPredicted RBP1.25□□□□□ -2.21
CD44-233ENST00000531141 PRDX4Q13162 271 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 SS18Q15532 418 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 PLPPR5Q32ZL2 321 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 ARHGAP11BQ3KRB8 267 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 FAM201AQ5SY85 155 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 C3orf33Q6P1S2 294 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 C22orf39Q6P5X5 142 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 UBL4BQ8N7F7 174 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 OR11H1Q8NG94 326 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 OR11H2Q8NH07 326 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 C1QTNF6Q9BXI9 259 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 GTSF1LQ9H1H1 148 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 MRPL27Q9P0M9 148 aaKnown RBP1.25□□□□□ -2.21
CD44-233ENST00000531141 PYCARDQ9ULZ3 195 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 PRELID3BQ9Y3B1 194 aa1.25□□□□□ -2.21
CD44-233ENST00000531141 FAM32AQ9Y421 112 aaKnown RBP1.25□□□□□ -2.21
CD44-233ENST00000531141 PCYT1BQ9Y5K3 369 aaPredicted RBP1.25□□□□□ -2.21
CD44-233ENST00000531141 IGHV1-69-2A0A0G2JMI3 117 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 A0A1B0GW54 56 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 FUOMA2VDF0 154 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 OR4C46A6NHA9 309 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 OR4C45A6NMZ5 311 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 B4DEV8 164 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 TSTD3H0UI37 97 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 K7EIL1 84 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 FAAHO00519 579 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 PDE6DO43924 150 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 PFDN1O60925 122 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 APOMO95445 188 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 IGLV3-27P01718 113 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 REG1AP05451 166 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 OR13C7P0DN81 318 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 CRYGSP22914 178 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 SERPINB1P30740 379 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 REG1BP48304 166 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 CRYBA4P53673 196 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 CTBP2P56545 445 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 GABARAPL2P60520 117 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 HSPE1P61604 102 aaKnown RBP1.24□□□□□ -2.21
CD44-233ENST00000531141 GNG3P63215 75 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 HOXC5Q00444 222 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 MESTQ5EB52 335 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 LPCAT3Q6P1A2 487 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 SBSNQ6UWP8 590 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 GRINAQ7Z429 371 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 S100A7AQ86SG5 101 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 TMEM75Q8N9X5 138 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 TMEM35BQ8NCS4 154 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 OR51A2Q8NGJ7 313 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 OR13C6PQ8NH95 151 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 CPNE2Q96FN4 548 aaPredicted RBP1.24□□□□□ -2.21
CD44-233ENST00000531141 ABHD14BQ96IU4 210 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 HOPXQ9BPY8 73 aaPredicted RBP1.24□□□□□ -2.21
CD44-233ENST00000531141 MED18Q9BUE0 208 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 MED28Q9H204 178 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 MIXL1Q9H2W2 232 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 FAM96AQ9H5X1 160 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 ENY2Q9NPA8 101 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 IDI2-AS1Q9NZ38 188 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 OPTCQ9UBM4 332 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 RSL24D1Q9UHA3 163 aaKnown RBP1.24□□□□□ -2.21
CD44-233ENST00000531141 AK3Q9UIJ7 227 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 MINOS1-NBL1R4GNA1 71 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 DNAH7Q8WXX0 4024 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 NINQ8N4C6 2090 aa1.24□□□□□ -2.21
CD44-233ENST00000531141 KIAA1549Q9HCM3 1950 aa1.23□□□□□ -2.21
CD44-233ENST00000531141 ANKRD36A6QL64 1941 aa1.23□□□□□ -2.21
CD44-233ENST00000531141 A0A0D9SEW6 157 aa1.23□□□□□ -2.21
CD44-233ENST00000531141 EXOC1LA0A1B0GW35 172 aa1.23□□□□□ -2.21
CD44-233ENST00000531141 hADV38S2A0JD32 116 aa1.23□□□□□ -2.21
CD44-233ENST00000531141 ZNF860A6NHJ4 632 aa1.23□□□□□ -2.21
CD44-233ENST00000531141 FNDC10F2Z333 226 aa1.23□□□□□ -2.21
CD44-233ENST00000531141 DHFRP00374 187 aa1.23□□□□□ -2.21
CD44-233ENST00000531141 CRHP06850 196 aa1.23□□□□□ -2.21
CD44-233ENST00000531141 CD7P09564 240 aa1.23□□□□□ -2.21
CD44-233ENST00000531141 NBEAP1P0C6P0 100 aa1.23□□□□□ -2.21
CD44-233ENST00000531141 PRB4P10163 310 aaPredicted RBP1.23□□□□□ -2.21
CD44-233ENST00000531141 SCGB1A1P11684 91 aa1.23□□□□□ -2.21
CD44-233ENST00000531141 COX6A1P12074 109 aa1.23□□□□□ -2.21
CD44-233ENST00000531141 IDO1P14902 403 aa1.23□□□□□ -2.21
CD44-233ENST00000531141 CDK2P24941 298 aa1.23□□□□□ -2.21
CD44-233ENST00000531141 ATP6V0CP27449 155 aa1.23□□□□□ -2.21
CD44-233ENST00000531141 MAP2K4P45985 399 aa1.23□□□□□ -2.21
CD44-233ENST00000531141 RPL5P46777 297 aaKnown RBP1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms