RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 FAM25GB3EWG6 89 aa5.45□□□□□ -1.54
CD44-232ENST00000531118 NOL3O60936 208 aaKnown RBP5.45□□□□□ -1.54
CD44-232ENST00000531118 GAS8-AS1O95177 125 aa5.45□□□□□ -1.54
CD44-232ENST00000531118 CRYGDP07320 174 aa5.45□□□□□ -1.54
CD44-232ENST00000531118 MALP21145 153 aa5.45□□□□□ -1.54
CD44-232ENST00000531118 GALR1P47211 349 aa5.45□□□□□ -1.54
CD44-232ENST00000531118 NCS1P62166 190 aa5.45□□□□□ -1.54
CD44-232ENST00000531118 RHOBP62745 196 aa5.45□□□□□ -1.54
CD44-232ENST00000531118 GAMTQ14353 236 aa5.45□□□□□ -1.54
CD44-232ENST00000531118 GPR107Q5VW38 600 aa5.45□□□□□ -1.54
CD44-232ENST00000531118 IGFL4Q6B9Z1 124 aa5.45□□□□□ -1.54
CD44-232ENST00000531118 ETFRF1Q6IPR1 90 aa5.45□□□□□ -1.54
CD44-232ENST00000531118 LPCAT3Q6P1A2 487 aa5.45□□□□□ -1.54
CD44-232ENST00000531118 ZNF738Q8NE65 137 aa5.45□□□□□ -1.54
CD44-232ENST00000531118 TRGV2A0A075B6R0 118 aa5.44□□□□□ -1.54
CD44-232ENST00000531118 IGKV1D-37A0A075B6S9 117 aa5.44□□□□□ -1.54
CD44-232ENST00000531118 GABARAPO95166 117 aa5.44□□□□□ -1.54
CD44-232ENST00000531118 CDKN1BP46527 198 aa5.44□□□□□ -1.54
CD44-232ENST00000531118 SPCS3P61009 180 aa5.44□□□□□ -1.54
CD44-232ENST00000531118 RPL37AP61513 92 aaKnown RBP5.44□□□□□ -1.54
CD44-232ENST00000531118 TSPAN5P62079 268 aa5.44□□□□□ -1.54
CD44-232ENST00000531118 ZNF90Q03938 601 aa5.44□□□□□ -1.54
CD44-232ENST00000531118 WFDC2Q14508 124 aa5.44□□□□□ -1.54
CD44-232ENST00000531118 AARDQ4LEZ3 155 aa5.44□□□□□ -1.54
CD44-232ENST00000531118 LYPD5Q6UWN5 251 aa5.44□□□□□ -1.54
CD44-232ENST00000531118 ARRDC1Q8N5I2 433 aa5.44□□□□□ -1.54
CD44-232ENST00000531118 OR8A1Q8NGG7 326 aa5.44□□□□□ -1.54
CD44-232ENST00000531118 C20orf144Q9BQM9 153 aa5.44□□□□□ -1.54
CD44-232ENST00000531118 RSG1Q9BU20 258 aa5.44□□□□□ -1.54
CD44-232ENST00000531118 SLC25A22Q9H936 323 aa5.44□□□□□ -1.54
CD44-232ENST00000531118 HEYLQ9NQ87 328 aaPredicted RBP5.44□□□□□ -1.54
CD44-232ENST00000531118 PPP1R14DQ9NXH3 145 aa5.44□□□□□ -1.54
CD44-232ENST00000531118 ZFP92A6NM28 416 aa5.43□□□□□ -1.54
CD44-232ENST00000531118 RGS5O15539 181 aa5.43□□□□□ -1.54
CD44-232ENST00000531118 HPGDSO60760 199 aa5.43□□□□□ -1.54
CD44-232ENST00000531118 ATG12O94817 140 aa5.43□□□□□ -1.54
CD44-232ENST00000531118 IGLV2-8P01709 118 aa5.43□□□□□ -1.54
CD44-232ENST00000531118 OR5AC1P0C628 307 aa5.43□□□□□ -1.54
CD44-232ENST00000531118 RCVRNP35243 200 aa5.43□□□□□ -1.54
CD44-232ENST00000531118 HRH1P35367 487 aa5.43□□□□□ -1.54
CD44-232ENST00000531118 CTF1Q16619 201 aa5.43□□□□□ -1.54
CD44-232ENST00000531118 NMSQ5H8A3 153 aa5.43□□□□□ -1.54
CD44-232ENST00000531118 GFI1BQ5VTD9 330 aa5.43□□□□□ -1.54
CD44-232ENST00000531118 SNX29P2Q8IUI4 249 aa5.43□□□□□ -1.54
CD44-232ENST00000531118 CCDC28AQ8IWP9 274 aa5.43□□□□□ -1.54
CD44-232ENST00000531118 RNASE11Q8TAA1 199 aaKnown RBP5.43□□□□□ -1.54
CD44-232ENST00000531118 RAB2BQ8WUD1 216 aa5.43□□□□□ -1.54
CD44-232ENST00000531118 IL22RA2Q969J5 263 aa5.43□□□□□ -1.54
CD44-232ENST00000531118 TP53RKQ96S44 253 aa5.43□□□□□ -1.54
CD44-232ENST00000531118 BCL7BQ9BQE9 202 aa5.43□□□□□ -1.54
CD44-232ENST00000531118 CHAC1Q9BUX1 264 aa5.43□□□□□ -1.54
CD44-232ENST00000531118 RCL1Q9Y2P8 373 aaKnown RBP5.43□□□□□ -1.54
CD44-232ENST00000531118 TRAV5A0A0B4J249 113 aa5.42□□□□□ -1.54
CD44-232ENST00000531118 ZNF324O75467 553 aaPredicted RBP5.42□□□□□ -1.54
CD44-232ENST00000531118 SCGB1D2O95969 90 aa5.42□□□□□ -1.54
CD44-232ENST00000531118 SMIM18P0DKX4 95 aa5.42□□□□□ -1.54
CD44-232ENST00000531118 HLA-DMAP28067 261 aa5.42□□□□□ -1.54
CD44-232ENST00000531118 TMBIM6P55061 237 aa5.42□□□□□ -1.54
CD44-232ENST00000531118 RND3P61587 244 aa5.42□□□□□ -1.54
CD44-232ENST00000531118 DAZ2Q13117 558 aaKnown RBP5.42□□□□□ -1.54
CD44-232ENST00000531118 ASAH1Q13510 395 aa5.42□□□□□ -1.54
CD44-232ENST00000531118 OR2F1Q13607 317 aa5.42□□□□□ -1.54
CD44-232ENST00000531118 TRIM16LQ309B1 348 aa5.42□□□□□ -1.54
CD44-232ENST00000531118 LINC01620Q4KN68 170 aa5.42□□□□□ -1.54
CD44-232ENST00000531118 NEGR1Q7Z3B1 354 aa5.42□□□□□ -1.54
CD44-232ENST00000531118 OR52E5Q8NH55 327 aa5.42□□□□□ -1.54
CD44-232ENST00000531118 CIRBP-AS1Q8TBR5 109 aa5.42□□□□□ -1.54
CD44-232ENST00000531118 GPX8Q8TED1 209 aa5.42□□□□□ -1.54
CD44-232ENST00000531118 DAZAP1Q96EP5 407 aaKnown RBP5.42□□□□□ -1.54
CD44-232ENST00000531118 PARD6GQ9BYG4 376 aaPredicted RBP5.42□□□□□ -1.54
CD44-232ENST00000531118 Q9HAA7 133 aa5.42□□□□□ -1.54
CD44-232ENST00000531118 RABL2AQ9UBK7 228 aaPredicted RBP5.42□□□□□ -1.54
CD44-232ENST00000531118 RABL2BQ9UNT1 228 aa5.42□□□□□ -1.54
CD44-232ENST00000531118 LPAP08519 4548 aa5.42□□□□□ -1.54
CD44-232ENST00000531118 MUC2Q02817 5179 aa5.41□□□□□ -1.54
CD44-232ENST00000531118 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.41□□□□□ -1.54
CD44-232ENST00000531118 TRGV1A0A0A0MS02 117 aa5.41□□□□□ -1.54
CD44-232ENST00000531118 CEBPZOSA8MTT3 80 aa5.41□□□□□ -1.54
CD44-232ENST00000531118 IGHV3-53P01767 116 aa5.41□□□□□ -1.54
CD44-232ENST00000531118 FABP1P07148 127 aa5.41□□□□□ -1.54
CD44-232ENST00000531118 TBPP20226 339 aa5.41□□□□□ -1.54
CD44-232ENST00000531118 PTTG1IPP53801 180 aa5.41□□□□□ -1.54
CD44-232ENST00000531118 UCP3P55916 312 aa5.41□□□□□ -1.54
CD44-232ENST00000531118 MRPS10P82664 201 aaKnown RBP5.41□□□□□ -1.54
CD44-232ENST00000531118 KLF9Q13886 244 aaPredicted RBP5.41□□□□□ -1.54
CD44-232ENST00000531118 MRPL23Q16540 153 aaKnown RBP5.41□□□□□ -1.54
CD44-232ENST00000531118 CLVS1Q8IUQ0 354 aaPredicted RBP5.41□□□□□ -1.54
CD44-232ENST00000531118 OR1B1Q8NGR6 318 aa5.41□□□□□ -1.54
CD44-232ENST00000531118 SLC35E1Q96K37 410 aa5.41□□□□□ -1.54
CD44-232ENST00000531118 NAA50Q9GZZ1 169 aaKnown RBP5.41□□□□□ -1.54
CD44-232ENST00000531118 EXTL2Q9UBQ6 330 aa5.41□□□□□ -1.54
CD44-232ENST00000531118 PRO0255Q9UI72 69 aa5.41□□□□□ -1.54
CD44-232ENST00000531118 FUT9Q9Y231 359 aa5.41□□□□□ -1.54
CD44-232ENST00000531118 IGLV2-11P01706 119 aa5.4□□□□□ -1.54
CD44-232ENST00000531118 PGAM2P15259 253 aa5.4□□□□□ -1.54
CD44-232ENST00000531118 CXCL3P19876 107 aa5.4□□□□□ -1.54
CD44-232ENST00000531118 SRIP30626 198 aa5.4□□□□□ -1.54
CD44-232ENST00000531118 CRYBA4P53673 196 aa5.4□□□□□ -1.54
CD44-232ENST00000531118 BLOC1S1P78537 153 aa5.4□□□□□ -1.54
CD44-232ENST00000531118 SSBP1Q04837 148 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms