RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 BAP18Q8IXM2 172 aa11.16□□□□□ -0.62
CPSF1-205ENST00000531042 ZBTB8BQ8NAP8 495 aaPredicted RBP11.16□□□□□ -0.62
CPSF1-205ENST00000531042 OR8A1Q8NGG7 326 aa11.16□□□□□ -0.62
CPSF1-205ENST00000531042 MGAT4CQ9UBM8 478 aa11.16□□□□□ -0.62
CPSF1-205ENST00000531042 IGLV2-18A0A075B6J9 118 aa11.15□□□□□ -0.62
CPSF1-205ENST00000531042 TRAV12-2A0A075B6T6 113 aa11.15□□□□□ -0.62
CPSF1-205ENST00000531042 LYRM9A8MSI8 78 aa11.15□□□□□ -0.62
CPSF1-205ENST00000531042 HIST1H1AQ02539 215 aaPredicted RBP11.15□□□□□ -0.62
CPSF1-205ENST00000531042 SLC38A11Q08AI6 406 aa11.15□□□□□ -0.62
CPSF1-205ENST00000531042 PSG3Q16557 428 aa11.15□□□□□ -0.62
CPSF1-205ENST00000531042 Q6ZR54 194 aa11.15□□□□□ -0.62
CPSF1-205ENST00000531042 MITD1Q8WV92 249 aa11.15□□□□□ -0.62
CPSF1-205ENST00000531042 ARV1Q9H2C2 271 aa11.15□□□□□ -0.62
CPSF1-205ENST00000531042 GSKIPQ9P0R6 139 aa11.15□□□□□ -0.62
CPSF1-205ENST00000531042 RCL1Q9Y2P8 373 aaKnown RBP11.15□□□□□ -0.62
CPSF1-205ENST00000531042 PCLOQ9Y6V0 5065 aa11.14□□□□□ -0.63
CPSF1-205ENST00000531042 NACAE9PAV3 2078 aa11.14□□□□□ -0.63
CPSF1-205ENST00000531042 MRPS12O15235 138 aaKnown RBP11.14□□□□□ -0.63
CPSF1-205ENST00000531042 IL7P13232 177 aa11.14□□□□□ -0.63
CPSF1-205ENST00000531042 AZU1P20160 251 aa11.14□□□□□ -0.63
CPSF1-205ENST00000531042 RHOBP62745 196 aa11.14□□□□□ -0.63
CPSF1-205ENST00000531042 ARL16Q0P5N6 197 aa11.14□□□□□ -0.63
CPSF1-205ENST00000531042 PXDC1Q5TGL8 231 aa11.14□□□□□ -0.63
CPSF1-205ENST00000531042 LRRC20Q8TCA0 184 aa11.14□□□□□ -0.63
CPSF1-205ENST00000531042 RNF24Q9Y225 148 aa11.14□□□□□ -0.63
CPSF1-205ENST00000531042 PLAC8L1A1L4L8 177 aa11.13□□□□□ -0.63
CPSF1-205ENST00000531042 C7orf66A4D0T2 115 aa11.13□□□□□ -0.63
CPSF1-205ENST00000531042 GOSR2O14653 212 aa11.13□□□□□ -0.63
CPSF1-205ENST00000531042 AGPAT2O15120 278 aa11.13□□□□□ -0.63
CPSF1-205ENST00000531042 MBPP02686 304 aaPredicted RBP11.13□□□□□ -0.63
CPSF1-205ENST00000531042 ZNF546Q86UE3 836 aa11.13□□□□□ -0.63
CPSF1-205ENST00000531042 TMEM256Q8N2U0 113 aa11.13□□□□□ -0.63
CPSF1-205ENST00000531042 C15orf53Q8NAA6 179 aa11.13□□□□□ -0.63
CPSF1-205ENST00000531042 GGACTQ9BVM4 153 aa11.13□□□□□ -0.63
CPSF1-205ENST00000531042 PPP1R14DQ9NXH3 145 aa11.13□□□□□ -0.63
CPSF1-205ENST00000531042 DEFB130BP0DP73 79 aa11.12□□□□□ -0.63
CPSF1-205ENST00000531042 DEFB130AP0DP74 79 aa11.12□□□□□ -0.63
CPSF1-205ENST00000531042 PRB4P10163 310 aaPredicted RBP11.12□□□□□ -0.63
CPSF1-205ENST00000531042 CXCL2P19875 107 aa11.12□□□□□ -0.63
CPSF1-205ENST00000531042 FCN2Q15485 313 aa11.12□□□□□ -0.63
CPSF1-205ENST00000531042 RGS21Q2M5E4 152 aa11.12□□□□□ -0.63
CPSF1-205ENST00000531042 LINC00305Q7Z4B0 112 aa11.12□□□□□ -0.63
CPSF1-205ENST00000531042 RPUSD4Q96CM3 377 aaKnown RBP11.12□□□□□ -0.63
CPSF1-205ENST00000531042 LINC01587Q99440 93 aa11.12□□□□□ -0.63
CPSF1-205ENST00000531042 TAS2R60P59551 318 aa11.11□□□□□ -0.63
CPSF1-205ENST00000531042 LCN15Q6UWW0 184 aa11.11□□□□□ -0.63
CPSF1-205ENST00000531042 TMEM37Q8WXS4 190 aa11.11□□□□□ -0.63
CPSF1-205ENST00000531042 MGST2Q99735 147 aa11.11□□□□□ -0.63
CPSF1-205ENST00000531042 CCDC32Q9BV29 185 aa11.11□□□□□ -0.63
CPSF1-205ENST00000531042 C20orf85Q9H1P6 137 aa11.11□□□□□ -0.63
CPSF1-205ENST00000531042 ZNF331Q9NQX6 463 aaPredicted RBP11.11□□□□□ -0.63
CPSF1-205ENST00000531042 CCSO14618 274 aa11.1□□□□□ -0.63
CPSF1-205ENST00000531042 PLA2G10O15496 165 aa11.1□□□□□ -0.63
CPSF1-205ENST00000531042 UPK1BO75841 260 aa11.1□□□□□ -0.63
CPSF1-205ENST00000531042 SNRPCP09234 159 aaKnown RBP11.1□□□□□ -0.63
CPSF1-205ENST00000531042 CDKN1BP46527 198 aa11.1□□□□□ -0.63
CPSF1-205ENST00000531042 FAM3BP58499 235 aaPredicted RBP11.1□□□□□ -0.63
CPSF1-205ENST00000531042 Q6ZNX1 250 aa11.1□□□□□ -0.63
CPSF1-205ENST00000531042 BPIFA4PQ86YQ2 179 aa11.1□□□□□ -0.63
CPSF1-205ENST00000531042 SLC50A1Q9BRV3 221 aa11.1□□□□□ -0.63
CPSF1-205ENST00000531042 DYNC1H1Q14204 4646 aaKnown RBP11.09□□□□□ -0.63
CPSF1-205ENST00000531042 CBY3A6NI87 242 aa11.09□□□□□ -0.63
CPSF1-205ENST00000531042 F5H768 121 aa11.09□□□□□ -0.63
CPSF1-205ENST00000531042 L7N2F9 121 aa11.09□□□□□ -0.63
CPSF1-205ENST00000531042 COX7A2P2O60397 106 aa11.09□□□□□ -0.63
CPSF1-205ENST00000531042 VAMP2P63027 116 aa11.09□□□□□ -0.63
CPSF1-205ENST00000531042 MORN5Q5VZ52 161 aa11.09□□□□□ -0.63
CPSF1-205ENST00000531042 C16orf74Q96GX8 76 aa11.09□□□□□ -0.63
CPSF1-205ENST00000531042 A0A1B0GVG6 124 aa11.08□□□□□ -0.64
CPSF1-205ENST00000531042 LYRM1O43325 122 aa11.08□□□□□ -0.64
CPSF1-205ENST00000531042 ATP5G1P05496 136 aa11.08□□□□□ -0.64
CPSF1-205ENST00000531042 MED14OSP0DP75 135 aa11.08□□□□□ -0.64
CPSF1-205ENST00000531042 HTN1P15515 57 aa11.08□□□□□ -0.64
CPSF1-205ENST00000531042 ATP5G3P48201 142 aa11.08□□□□□ -0.64
CPSF1-205ENST00000531042 OPCMLQ14982 345 aa11.08□□□□□ -0.64
CPSF1-205ENST00000531042 SOHLH1Q5JUK2 328 aa11.08□□□□□ -0.64
CPSF1-205ENST00000531042 C1orf134Q5TEV5 83 aa11.08□□□□□ -0.64
CPSF1-205ENST00000531042 C10orf113Q5VZT2 155 aa11.08□□□□□ -0.64
CPSF1-205ENST00000531042 ATG101Q9BSB4 218 aa11.08□□□□□ -0.64
CPSF1-205ENST00000531042 LSM5Q9Y4Y9 91 aaKnown RBP11.08□□□□□ -0.64
CPSF1-205ENST00000531042 TIMM8BQ9Y5J9 83 aaPredicted RBP11.08□□□□□ -0.64
CPSF1-205ENST00000531042 DNAH11Q96DT5 4516 aa11.08□□□□□ -0.64
CPSF1-205ENST00000531042 FAM25EA8MYX2 175 aa11.07□□□□□ -0.64
CPSF1-205ENST00000531042 H3BTX0 84 aa11.07□□□□□ -0.64
CPSF1-205ENST00000531042 SLC17A3O00476 420 aa11.07□□□□□ -0.64
CPSF1-205ENST00000531042 TCRBP04435 133 aa11.07□□□□□ -0.64
CPSF1-205ENST00000531042 IGLC2P0DOY2 106 aa11.07□□□□□ -0.64
CPSF1-205ENST00000531042 CAMLGP49069 296 aa11.07□□□□□ -0.64
CPSF1-205ENST00000531042 BCAP31P51572 246 aa11.07□□□□□ -0.64
CPSF1-205ENST00000531042 KIR3DS1Q14943 382 aa11.07□□□□□ -0.64
CPSF1-205ENST00000531042 ZNF493Q6ZR52 646 aa11.07□□□□□ -0.64
CPSF1-205ENST00000531042 RNASE8Q8TDE3 154 aaKnown RBP11.07□□□□□ -0.64
CPSF1-205ENST00000531042 SAT2Q96F10 170 aaPredicted RBP11.07□□□□□ -0.64
CPSF1-205ENST00000531042 C20orf144Q9BQM9 153 aa11.07□□□□□ -0.64
CPSF1-205ENST00000531042 C11orf1Q9H5F2 150 aa11.07□□□□□ -0.64
CPSF1-205ENST00000531042 DNAJC4Q9NNZ3 241 aa11.07□□□□□ -0.64
CPSF1-205ENST00000531042 TRAV6A0A075B6T7 132 aa11.06□□□□□ -0.64
CPSF1-205ENST00000531042 PRAC2D3DTV9 90 aa11.06□□□□□ -0.64
CPSF1-205ENST00000531042 H3BQ15 152 aa11.06□□□□□ -0.64
CPSF1-205ENST00000531042 H7BYZ3 331 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms