RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 OR10J4P0C629 311 aa7.55□□□□□ -1.2
CTNND1-228ENST00000531007 ATF4P18848 351 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-228ENST00000531007 SRSF3P84103 164 aaKnown RBP7.55□□□□□ -1.2
CTNND1-228ENST00000531007 PNRC1Q12796 327 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-228ENST00000531007 MORN5Q5VZ52 161 aa7.55□□□□□ -1.2
CTNND1-228ENST00000531007 C10orf99Q6UWK7 81 aa7.55□□□□□ -1.2
CTNND1-228ENST00000531007 LCNL1Q6ZST4 164 aa7.55□□□□□ -1.2
CTNND1-228ENST00000531007 DPF1Q92782 380 aa7.55□□□□□ -1.2
CTNND1-228ENST00000531007 HIST1H2BAQ96A08 127 aa7.55□□□□□ -1.2
CTNND1-228ENST00000531007 C11orf52Q96A22 123 aa7.55□□□□□ -1.2
CTNND1-228ENST00000531007 SLC50A1Q9BRV3 221 aa7.55□□□□□ -1.2
CTNND1-228ENST00000531007 C20orf24Q9BUV8 137 aa7.55□□□□□ -1.2
CTNND1-228ENST00000531007 PEMTQ9UBM1 199 aa7.55□□□□□ -1.2
CTNND1-228ENST00000531007 TRBV19A0A075B6N1 114 aa7.54□□□□□ -1.2
CTNND1-228ENST00000531007 IGHV7-4-1A0A0J9YVY3 117 aa7.54□□□□□ -1.2
CTNND1-228ENST00000531007 ZNF320A2RRD8 509 aa7.54□□□□□ -1.2
CTNND1-228ENST00000531007 FBLL1A6NHQ2 334 aaKnown RBP7.54□□□□□ -1.2
CTNND1-228ENST00000531007 M0QZ24 198 aa7.54□□□□□ -1.2
CTNND1-228ENST00000531007 SNAPINO95295 136 aa7.54□□□□□ -1.2
CTNND1-228ENST00000531007 PYYP10082 97 aa7.54□□□□□ -1.2
CTNND1-228ENST00000531007 MYCNOSP40205 109 aa7.54□□□□□ -1.2
CTNND1-228ENST00000531007 UBE2G2P60604 165 aa7.54□□□□□ -1.2
CTNND1-228ENST00000531007 KLF5Q13887 457 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-228ENST00000531007 TCTEX1D4Q5JR98 221 aa7.54□□□□□ -1.2
CTNND1-228ENST00000531007 C16orf54Q6UWD8 224 aa7.54□□□□□ -1.2
CTNND1-228ENST00000531007 CYB561D1Q8N8Q1 229 aa7.54□□□□□ -1.2
CTNND1-228ENST00000531007 C5orf17Q8NAS9 161 aa7.54□□□□□ -1.2
CTNND1-228ENST00000531007 OR1N2Q8NGR9 330 aa7.54□□□□□ -1.2
CTNND1-228ENST00000531007 NIPSNAP3BQ9BS92 247 aa7.54□□□□□ -1.2
CTNND1-228ENST00000531007 KRTAP9-9Q9BYP9 154 aa7.54□□□□□ -1.2
CTNND1-228ENST00000531007 KRTAP9-4Q9BYQ2 154 aa7.54□□□□□ -1.2
CTNND1-228ENST00000531007 AAMDCQ9H7C9 122 aa7.54□□□□□ -1.2
CTNND1-228ENST00000531007 OTORQ9NRC9 128 aa7.54□□□□□ -1.2
CTNND1-228ENST00000531007 PRELID1Q9Y255 219 aa7.54□□□□□ -1.2
CTNND1-228ENST00000531007 YTHDF2Q9Y5A9 579 aaKnown RBP7.54□□□□□ -1.2
CTNND1-228ENST00000531007 IGHV3-35A0A0C4DH35 117 aa7.53□□□□□ -1.2
CTNND1-228ENST00000531007 EIF3GO75821 320 aaKnown RBP eCLIP7.53□□□□□ -1.2
CTNND1-228ENST00000531007 HOXD3P31249 432 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-228ENST00000531007 SUMO1P63165 101 aaKnown RBP7.53□□□□□ -1.2
CTNND1-228ENST00000531007 UNQ9165/PRO28630Q6UXU0 137 aa7.53□□□□□ -1.2
CTNND1-228ENST00000531007 SIGLEC15Q6ZMC9 328 aa7.53□□□□□ -1.2
CTNND1-228ENST00000531007 NDUFA11Q86Y39 141 aa7.53□□□□□ -1.2
CTNND1-228ENST00000531007 KLHL30-AS1Q8NEE0 82 aa7.53□□□□□ -1.2
CTNND1-228ENST00000531007 CMTM2Q8TAZ6 248 aa7.53□□□□□ -1.2
CTNND1-228ENST00000531007 SMIM12Q96EX1 92 aa7.53□□□□□ -1.2
CTNND1-228ENST00000531007 LINC00052Q96N35 136 aa7.53□□□□□ -1.2
CTNND1-228ENST00000531007 ZNF586Q9NXT0 402 aa7.53□□□□□ -1.2
CTNND1-228ENST00000531007 SMPXQ9UHP9 88 aa7.53□□□□□ -1.2
CTNND1-228ENST00000531007 ATRQ13535 2644 aa7.53□□□□□ -1.2
CTNND1-228ENST00000531007 IGHV4OR15-8A0A075B7B6 117 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 A0A087WW49 117 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 ZNF785A8K8V0 405 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 B4DEV8 164 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 GGTLC3B5MD39 225 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 C9JQL5 133 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 H3BQ15 152 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 K7EQM0 130 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 APOC3P02656 99 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 CSN1S1P47710 185 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 TAS2R60P59551 318 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 RANP62826 216 aaKnown RBP7.52□□□□□ -1.21
CTNND1-228ENST00000531007 FHL3Q13643 280 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 KHDC1LQ5JSQ8 128 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 FAM90A2PQ658T7 463 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 LEMD1Q68G75 181 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 OR11H1Q8NG94 326 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 BLNKQ8WV28 456 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 GLMPQ8WWB7 406 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 MRPL53Q96EL3 112 aaKnown RBP7.52□□□□□ -1.21
CTNND1-228ENST00000531007 TVP23CQ96ET8 276 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 OR5B12Q96R08 314 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 ATG101Q9BSB4 218 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 RHPN1-AS1Q9BWJ2 59 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 Q9H3A6 140 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 NAT8Q9UHE5 227 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 LY96Q9Y6Y9 160 aa7.52□□□□□ -1.21
CTNND1-228ENST00000531007 PGPA6NDG6 321 aa7.51□□□□□ -1.21
CTNND1-228ENST00000531007 ZNF727A8MUV8 499 aa7.51□□□□□ -1.21
CTNND1-228ENST00000531007 C9JCJ5 164 aa7.51□□□□□ -1.21
CTNND1-228ENST00000531007 CHEK1O14757 476 aa7.51□□□□□ -1.21
CTNND1-228ENST00000531007 CD28P10747 220 aa7.51□□□□□ -1.21
CTNND1-228ENST00000531007 ADCYAP1P18509 176 aa7.51□□□□□ -1.21
CTNND1-228ENST00000531007 ATP5G3P48201 142 aa7.51□□□□□ -1.21
CTNND1-228ENST00000531007 TMEM241Q24JQ0 296 aa7.51□□□□□ -1.21
CTNND1-228ENST00000531007 CITED2Q99967 270 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-228ENST00000531007 SMIM7Q9BQ49 75 aa7.51□□□□□ -1.21
CTNND1-228ENST00000531007 PARLQ9H300 379 aa7.51□□□□□ -1.21
CTNND1-228ENST00000531007 C19orf73Q9NVV2 129 aa7.51□□□□□ -1.21
CTNND1-228ENST00000531007 SIGLEC8Q9NYZ4 499 aa7.51□□□□□ -1.21
CTNND1-228ENST00000531007 EPDR1Q9UM22 224 aa7.51□□□□□ -1.21
CTNND1-228ENST00000531007 TRBV6-1A0A0K0K1D8 114 aa7.5□□□□□ -1.21
CTNND1-228ENST00000531007 TMEM213A2RRL7 107 aa7.5□□□□□ -1.21
CTNND1-228ENST00000531007 CCL24O00175 119 aa7.5□□□□□ -1.21
CTNND1-228ENST00000531007 PEX7O00628 323 aa7.5□□□□□ -1.21
CTNND1-228ENST00000531007 NDUFB4O95168 129 aa7.5□□□□□ -1.21
CTNND1-228ENST00000531007 SLC25A5P05141 298 aaKnown RBP7.5□□□□□ -1.21
CTNND1-228ENST00000531007 CNN1P51911 297 aaKnown RBP7.5□□□□□ -1.21
CTNND1-228ENST00000531007 CEBPGP53567 150 aa7.5□□□□□ -1.21
CTNND1-228ENST00000531007 SYNJ2BPP57105 145 aa7.5□□□□□ -1.21
CTNND1-228ENST00000531007 RHEBQ15382 184 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms