RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 ZNF680Q8NEM1 530 aa13.65□□□□□ -0.22
GMDS-208ENST00000530927 C16orf92Q96LL3 132 aa13.65□□□□□ -0.22
GMDS-208ENST00000530927 NPCDR1Q9BY65 106 aa13.65□□□□□ -0.22
GMDS-208ENST00000530927 TRAV8-2A0A0B4J237 113 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 DEFB4AO15263 64 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 HLA-DMBP28068 263 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 FXYD7P58549 80 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 RPL7L1Q6DKI1 246 aaKnown RBP13.64□□□□□ -0.23
GMDS-208ENST00000530927 LINC00305Q7Z4B0 112 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 ZNF709Q8N972 641 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 OR11H2Q8NH07 326 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 SEPSECSQ9HD40 501 aaKnown RBP13.64□□□□□ -0.23
GMDS-208ENST00000530927 CYTL1Q9NRR1 136 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 LINC00862A6NCI5 91 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 C17orf112F2Z3M2 114 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 MRPS12O15235 138 aaKnown RBP13.64□□□□□ -0.23
GMDS-208ENST00000530927 COX7A2P2O60397 106 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 HLA-DRB4P13762 266 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 ID1P41134 155 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 PRR20EP86478 221 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 PRR20CP86479 221 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 PRR20DP86480 221 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 PRR20BP86481 221 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 PRR20AP86496 221 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 OPCMLQ14982 345 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 RARRES2Q99969 163 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 SAV1Q9H4B6 383 aaPredicted RBP13.64□□□□□ -0.23
GMDS-208ENST00000530927 KCNIP2Q9NS61 270 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 HLA-DRB4X5D2U9 266 aa13.64□□□□□ -0.23
GMDS-208ENST00000530927 RYR3Q15413 4870 aa13.63□□□□□ -0.23
GMDS-208ENST00000530927 TRAV5A0A0B4J249 113 aa13.63□□□□□ -0.23
GMDS-208ENST00000530927 H3BTX0 84 aa13.63□□□□□ -0.23
GMDS-208ENST00000530927 ISLRO14498 428 aa13.63□□□□□ -0.23
GMDS-208ENST00000530927 SPP1P10451 314 aa13.63□□□□□ -0.23
GMDS-208ENST00000530927 RPL29P47914 159 aaKnown RBP13.63□□□□□ -0.23
GMDS-208ENST00000530927 CLLU1Q5K131 121 aa13.63□□□□□ -0.23
GMDS-208ENST00000530927 SACSQ9NZJ4 4579 aa13.62□□□□□ -0.23
GMDS-208ENST00000530927 TENM2Q9NT68 2774 aa13.62□□□□□ -0.23
GMDS-208ENST00000530927 ZNF705DP0CH99 300 aaPredicted RBP13.62□□□□□ -0.23
GMDS-208ENST00000530927 ZNF705BP0CI00 300 aaPredicted RBP13.62□□□□□ -0.23
GMDS-208ENST00000530927 RPL7P18124 248 aaKnown RBP13.62□□□□□ -0.23
GMDS-208ENST00000530927 ATF4P18848 351 aaPredicted RBP13.62□□□□□ -0.23
GMDS-208ENST00000530927 GCSAMLQ5JQS6 135 aa13.62□□□□□ -0.23
GMDS-208ENST00000530927 C10orf113Q5VZT2 155 aa13.62□□□□□ -0.23
GMDS-208ENST00000530927 IL17DQ8TAD2 202 aa13.62□□□□□ -0.23
GMDS-208ENST00000530927 GATAD1Q8WUU5 269 aa13.62□□□□□ -0.23
GMDS-208ENST00000530927 ZNF471Q9BX82 626 aaPredicted RBP13.62□□□□□ -0.23
GMDS-208ENST00000530927 XCL2Q9UBD3 114 aa13.62□□□□□ -0.23
GMDS-208ENST00000530927 PXMP4Q9Y6I8 212 aa13.62□□□□□ -0.23
GMDS-208ENST00000530927 B2MP61769 119 aa13.61□□□□□ -0.23
GMDS-208ENST00000530927 EIF5AP63241 154 aaKnown RBP13.61□□□□□ -0.23
GMDS-208ENST00000530927 PMS2P11Q13670 270 aa13.61□□□□□ -0.23
GMDS-208ENST00000530927 PXDC1Q5TGL8 231 aa13.61□□□□□ -0.23
GMDS-208ENST00000530927 MORN3Q6PF18 240 aaPredicted RBP13.61□□□□□ -0.23
GMDS-208ENST00000530927 FOXI2Q6ZQN5 318 aa13.61□□□□□ -0.23
GMDS-208ENST00000530927 Q6ZRG5 221 aa13.61□□□□□ -0.23
GMDS-208ENST00000530927 HSD17B11Q8NBQ5 300 aa13.61□□□□□ -0.23
GMDS-208ENST00000530927 CSNK1G2-AS1Q8NCQ2 148 aa13.61□□□□□ -0.23
GMDS-208ENST00000530927 OR4B1Q8NGF8 309 aa13.61□□□□□ -0.23
GMDS-208ENST00000530927 GNPNAT1Q96EK6 184 aaPredicted RBP13.61□□□□□ -0.23
GMDS-208ENST00000530927 GPR82Q96P67 336 aa13.61□□□□□ -0.23
GMDS-208ENST00000530927 LYSTQ99698 3801 aa13.61□□□□□ -0.23
GMDS-208ENST00000530927 SLC39A9Q9NUM3 307 aa13.61□□□□□ -0.23
GMDS-208ENST00000530927 TIMM9Q9Y5J7 89 aa13.61□□□□□ -0.23
GMDS-208ENST00000530927 MEOX2P50222 304 aa13.6□□□□□ -0.23
GMDS-208ENST00000530927 RAB14P61106 215 aa13.6□□□□□ -0.23
GMDS-208ENST00000530927 FAM78BQ5VT40 261 aa13.6□□□□□ -0.23
GMDS-208ENST00000530927 SLC35B3Q9H1N7 401 aa13.6□□□□□ -0.23
GMDS-208ENST00000530927 A0A0J9YX75 114 aa13.59□□□□□ -0.23
GMDS-208ENST00000530927 ATP6V0CP27449 155 aa13.59□□□□□ -0.23
GMDS-208ENST00000530927 S100A7P31151 101 aa13.59□□□□□ -0.23
GMDS-208ENST00000530927 PSMG3Q9BT73 122 aaPredicted RBP13.59□□□□□ -0.23
GMDS-208ENST00000530927 DNAJC4Q9NNZ3 241 aa13.59□□□□□ -0.23
GMDS-208ENST00000530927 PLECQ15149 4684 aaKnown RBP13.58□□□□□ -0.23
GMDS-208ENST00000530927 A0A087X0K7 114 aa13.58□□□□□ -0.24
GMDS-208ENST00000530927 SLC17A3O00476 420 aa13.58□□□□□ -0.24
GMDS-208ENST00000530927 SLC51BQ86UW2 128 aa13.58□□□□□ -0.24
GMDS-208ENST00000530927 RPRMQ9NS64 109 aa13.58□□□□□ -0.24
GMDS-208ENST00000530927 X6R8D5 127 aa13.58□□□□□ -0.24
GMDS-208ENST00000530927 ELOA3CA0A087WX78 387 aaPredicted RBP13.57□□□□□ -0.24
GMDS-208ENST00000530927 H3BQ15 152 aa13.57□□□□□ -0.24
GMDS-208ENST00000530927 TPT1P13693 172 aaKnown RBP13.57□□□□□ -0.24
GMDS-208ENST00000530927 BAP18Q8IXM2 172 aa13.57□□□□□ -0.24
GMDS-208ENST00000530927 Q8NAQ8 132 aa13.57□□□□□ -0.24
GMDS-208ENST00000530927 STOML3Q8TAV4 291 aa13.57□□□□□ -0.24
GMDS-208ENST00000530927 MED9Q9NWA0 146 aa13.57□□□□□ -0.24
GMDS-208ENST00000530927 RFNGQ9Y644 331 aa13.57□□□□□ -0.24
GMDS-208ENST00000530927 IGHV4-28A0A0C4DH34 117 aa13.56□□□□□ -0.24
GMDS-208ENST00000530927 RBMY1A1P0DJD3 496 aaKnown RBP13.56□□□□□ -0.24
GMDS-208ENST00000530927 RBMY1CP0DJD4 496 aa13.56□□□□□ -0.24
GMDS-208ENST00000530927 SERF2P84101 59 aa13.56□□□□□ -0.24
GMDS-208ENST00000530927 RBMY1FQ15415 496 aaKnown RBP13.56□□□□□ -0.24
GMDS-208ENST00000530927 SPATA31B1PQ5VZV4 182 aa13.56□□□□□ -0.24
GMDS-208ENST00000530927 EBLN2Q6P2I7 272 aa13.56□□□□□ -0.24
GMDS-208ENST00000530927 S100A7AQ86SG5 101 aa13.56□□□□□ -0.24
GMDS-208ENST00000530927 ZNF738Q8NE65 137 aa13.56□□□□□ -0.24
GMDS-208ENST00000530927 OR1L4Q8NGR5 311 aa13.56□□□□□ -0.24
GMDS-208ENST00000530927 OR2G3Q8NGZ4 309 aa13.56□□□□□ -0.24
GMDS-208ENST00000530927 PFDN5Q99471 154 aa13.56□□□□□ -0.24
GMDS-208ENST00000530927 ZNF705EA8MWA4 302 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms