RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 LCN15Q6UWW0 184 aa12.79□□□□□ -0.36
PSMC3-208ENST00000530887 BAP18Q8IXM2 172 aa12.79□□□□□ -0.36
PSMC3-208ENST00000530887 PSENENQ9NZ42 101 aa12.79□□□□□ -0.36
PSMC3-208ENST00000530887 OR5G3P0C626 314 aa12.78□□□□□ -0.36
PSMC3-208ENST00000530887 GATA2P23769 480 aaPredicted RBP12.78□□□□□ -0.36
PSMC3-208ENST00000530887 CCDC190Q86UF4 302 aa12.78□□□□□ -0.36
PSMC3-208ENST00000530887 CCDC28AQ8IWP9 274 aa12.78□□□□□ -0.36
PSMC3-208ENST00000530887 SMIM8Q96KF7 97 aa12.78□□□□□ -0.36
PSMC3-208ENST00000530887 MGAT4CQ9UBM8 478 aa12.78□□□□□ -0.36
PSMC3-208ENST00000530887 PLAC8L1A1L4L8 177 aa12.77□□□□□ -0.37
PSMC3-208ENST00000530887 TEPPQ6URK8 271 aa12.77□□□□□ -0.37
PSMC3-208ENST00000530887 RNF182Q8N6D2 247 aa12.77□□□□□ -0.37
PSMC3-208ENST00000530887 OR10P1Q8NGE3 313 aa12.77□□□□□ -0.37
PSMC3-208ENST00000530887 A0A1W2PPQ1 181 aa12.76□□□□□ -0.37
PSMC3-208ENST00000530887 NAP1L6A6NFF2 107 aa12.76□□□□□ -0.37
PSMC3-208ENST00000530887 H3BMQ9 156 aa12.76□□□□□ -0.37
PSMC3-208ENST00000530887 H3BNG1 76 aa12.76□□□□□ -0.37
PSMC3-208ENST00000530887 H3BP45 60 aa12.76□□□□□ -0.37
PSMC3-208ENST00000530887 ANXA7P20073 488 aaKnown RBP12.76□□□□□ -0.37
PSMC3-208ENST00000530887 TAS2R30P59541 319 aa12.76□□□□□ -0.37
PSMC3-208ENST00000530887 TNP2Q05952 138 aa12.76□□□□□ -0.37
PSMC3-208ENST00000530887 TMEM182Q6ZP80 229 aaPredicted RBP12.76□□□□□ -0.37
PSMC3-208ENST00000530887 ZNF546Q86UE3 836 aa12.76□□□□□ -0.37
PSMC3-208ENST00000530887 RPUSD4Q96CM3 377 aaKnown RBP12.76□□□□□ -0.37
PSMC3-208ENST00000530887 GGACTQ9BVM4 153 aa12.76□□□□□ -0.37
PSMC3-208ENST00000530887 TRAV12-2A0A075B6T6 113 aa12.75□□□□□ -0.37
PSMC3-208ENST00000530887 POLR2GP62487 172 aaKnown RBP eCLIP12.75□□□□□ -0.37
PSMC3-208ENST00000530887 BPIFA4PQ86YQ2 179 aa12.75□□□□□ -0.37
PSMC3-208ENST00000530887 RNASE8Q8TDE3 154 aaKnown RBP12.75□□□□□ -0.37
PSMC3-208ENST00000530887 ARV1Q9H2C2 271 aa12.75□□□□□ -0.37
PSMC3-208ENST00000530887 TSC22D2O75157 780 aa12.74□□□□□ -0.37
PSMC3-208ENST00000530887 AZU1P20160 251 aa12.74□□□□□ -0.37
PSMC3-208ENST00000530887 M6PRP20645 277 aa12.74□□□□□ -0.37
PSMC3-208ENST00000530887 INPP1P49441 399 aa12.74□□□□□ -0.37
PSMC3-208ENST00000530887 CNPY1Q3B7I2 92 aa12.74□□□□□ -0.37
PSMC3-208ENST00000530887 IGFL4Q6B9Z1 124 aa12.74□□□□□ -0.37
PSMC3-208ENST00000530887 SSX7Q7RTT5 188 aa12.74□□□□□ -0.37
PSMC3-208ENST00000530887 RNF141Q8WVD5 230 aa12.74□□□□□ -0.37
PSMC3-208ENST00000530887 GNPNAT1Q96EK6 184 aaPredicted RBP12.74□□□□□ -0.37
PSMC3-208ENST00000530887 ARL6Q9H0F7 186 aa12.74□□□□□ -0.37
PSMC3-208ENST00000530887 LINC00588Q9Y4M8 146 aa12.74□□□□□ -0.37
PSMC3-208ENST00000530887 PXMP4Q9Y6I8 212 aa12.74□□□□□ -0.37
PSMC3-208ENST00000530887 C9orf170A2RU37 121 aa12.73□□□□□ -0.37
PSMC3-208ENST00000530887 GOSR2O14653 212 aa12.73□□□□□ -0.37
PSMC3-208ENST00000530887 HTN1P15515 57 aa12.73□□□□□ -0.37
PSMC3-208ENST00000530887 TMEM14EPQ6UXP3 125 aa12.73□□□□□ -0.37
PSMC3-208ENST00000530887 RXFP4Q8TDU9 374 aa12.73□□□□□ -0.37
PSMC3-208ENST00000530887 ODF3Q96PU9 254 aa12.73□□□□□ -0.37
PSMC3-208ENST00000530887 UPK3BQ9BT76 320 aa12.73□□□□□ -0.37
PSMC3-208ENST00000530887 Q9H8V8 135 aa12.73□□□□□ -0.37
PSMC3-208ENST00000530887 NOP10Q9NPE3 64 aaKnown RBP12.73□□□□□ -0.37
PSMC3-208ENST00000530887 ZNF331Q9NQX6 463 aaPredicted RBP12.73□□□□□ -0.37
PSMC3-208ENST00000530887 PMS2P5A8MQ11 134 aa12.72□□□□□ -0.37
PSMC3-208ENST00000530887 SNURFLB1AK76 121 aa12.72□□□□□ -0.37
PSMC3-208ENST00000530887 SSSCA1O60232 199 aa12.72□□□□□ -0.37
PSMC3-208ENST00000530887 RLN2P04090 185 aa12.72□□□□□ -0.37
PSMC3-208ENST00000530887 RAB31Q13636 194 aa12.72□□□□□ -0.37
PSMC3-208ENST00000530887 GUK1Q16774 197 aa12.72□□□□□ -0.37
PSMC3-208ENST00000530887 SPANXN2Q5MJ10 180 aa12.72□□□□□ -0.37
PSMC3-208ENST00000530887 LINC00612Q8N6U2 182 aa12.72□□□□□ -0.37
PSMC3-208ENST00000530887 UHRF2Q96PU4 802 aa12.72□□□□□ -0.37
PSMC3-208ENST00000530887 V9GYH0 126 aa12.72□□□□□ -0.37
PSMC3-208ENST00000530887 LINC00305Q7Z4B0 112 aa12.71□□□□□ -0.37
PSMC3-208ENST00000530887 Q9H3A6 140 aa12.71□□□□□ -0.37
PSMC3-208ENST00000530887 CENPXA8MT69 81 aa12.7□□□□□ -0.38
PSMC3-208ENST00000530887 NDUFB6O95139 128 aa12.7□□□□□ -0.38
PSMC3-208ENST00000530887 LEPP41159 167 aa12.7□□□□□ -0.38
PSMC3-208ENST00000530887 OR5I1Q13606 314 aa12.7□□□□□ -0.38
PSMC3-208ENST00000530887 FCN2Q15485 313 aa12.7□□□□□ -0.38
PSMC3-208ENST00000530887 MAPKAPK5-AS1Q8N8E1 139 aa12.7□□□□□ -0.38
PSMC3-208ENST00000530887 PYGO2Q9BRQ0 406 aa12.7□□□□□ -0.38
PSMC3-208ENST00000530887 ABCA13Q86UQ4 5058 aa12.7□□□□□ -0.38
PSMC3-208ENST00000530887 HSPG2P98160 4391 aa12.69□□□□□ -0.38
PSMC3-208ENST00000530887 MRPS12O15235 138 aaKnown RBP12.69□□□□□ -0.38
PSMC3-208ENST00000530887 COX7A2P2O60397 106 aa12.69□□□□□ -0.38
PSMC3-208ENST00000530887 PRM2P04554 102 aa12.69□□□□□ -0.38
PSMC3-208ENST00000530887 METTL15P1P0C7V9 234 aa12.69□□□□□ -0.38
PSMC3-208ENST00000530887 RRAS2P62070 204 aaPredicted RBP12.69□□□□□ -0.38
PSMC3-208ENST00000530887 Q6ZRG5 221 aa12.69□□□□□ -0.38
PSMC3-208ENST00000530887 LRP1BQ9NZR2 4599 aa12.68□□□□□ -0.38
PSMC3-208ENST00000530887 TRAV26-1A0A087WT03 109 aa12.68□□□□□ -0.38
PSMC3-208ENST00000530887 ZNF701M0R085 212 aaPredicted RBP12.68□□□□□ -0.38
PSMC3-208ENST00000530887 OR4E1P0C645 316 aa12.68□□□□□ -0.38
PSMC3-208ENST00000530887 DAZ2Q13117 558 aaKnown RBP12.68□□□□□ -0.38
PSMC3-208ENST00000530887 IAH1Q2TAA2 248 aaPredicted RBP12.68□□□□□ -0.38
PSMC3-208ENST00000530887 TRIQKQ629K1 86 aa12.68□□□□□ -0.38
PSMC3-208ENST00000530887 PATE2Q6UY27 113 aa12.68□□□□□ -0.38
PSMC3-208ENST00000530887 ZNF680Q8NEM1 530 aa12.68□□□□□ -0.38
PSMC3-208ENST00000530887 MRPS16Q9Y3D3 137 aaKnown RBP12.68□□□□□ -0.38
PSMC3-208ENST00000530887 AGPAT2O15120 278 aa12.67□□□□□ -0.38
PSMC3-208ENST00000530887 ZNF253O75346 499 aa12.67□□□□□ -0.38
PSMC3-208ENST00000530887 SLC38A11Q08AI6 406 aa12.67□□□□□ -0.38
PSMC3-208ENST00000530887 C10orf113Q5VZT2 155 aa12.67□□□□□ -0.38
PSMC3-208ENST00000530887 Q8N1X5 172 aa12.67□□□□□ -0.38
PSMC3-208ENST00000530887 C12orf45Q8N5I9 185 aaPredicted RBP12.67□□□□□ -0.38
PSMC3-208ENST00000530887 OR1L4Q8NGR5 311 aa12.67□□□□□ -0.38
PSMC3-208ENST00000530887 MRPL53Q96EL3 112 aaKnown RBP12.67□□□□□ -0.38
PSMC3-208ENST00000530887 C18orf15Q96N68 181 aa12.67□□□□□ -0.38
PSMC3-208ENST00000530887 PFDN5Q99471 154 aa12.67□□□□□ -0.38
PSMC3-208ENST00000530887 SCGB1D2O95969 90 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms