RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 GP9P14770 177 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 VEGFBP49765 207 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 PCOLCEQ15113 449 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 ZC2HC1BQ5TFG8 222 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 YAF2Q8IY57 180 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 CIARTQ8N365 385 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-214ENST00000530886 SPANXCQ9NY87 97 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 IGKV1D-37A0A075B6S9 117 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 TRAV4A0A0B4J268 109 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 MRPS21P82921 87 aaKnown RBP6.44□□□□□ -1.38
CSDE1-214ENST00000530886 ADIPOQQ15848 244 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 MRPL51Q4U2R6 128 aaKnown RBP6.44□□□□□ -1.38
CSDE1-214ENST00000530886 GTSCR1Q86UQ5 136 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 FAM169BQ8N8A8 192 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 TMEM75Q8N9X5 138 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 LINC01587Q99440 93 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 SPANXDQ9BXN6 97 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 SLC25A39Q9BZJ4 359 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-214ENST00000530886 KNL1Q8NG31 2342 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 KALRNO60229 2985 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 LOC389332A0A1B0GUA5 103 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 NPYP01303 97 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 FOXG1P55316 489 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-214ENST00000530886 MEIG1Q5JSS6 88 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 MRPL14Q6P1L8 145 aaKnown RBP6.44□□□□□ -1.38
CSDE1-214ENST00000530886 ANKRD29Q8N6D5 301 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 RFESDQ8TAC1 157 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 DEFB126Q9BYW3 111 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 SIGLEC9Q9Y336 463 aa6.44□□□□□ -1.38
CSDE1-214ENST00000530886 DSPP15924 2871 aaKnown RBP6.43□□□□□ -1.38
CSDE1-214ENST00000530886 SPINK2P20155 84 aa6.43□□□□□ -1.38
CSDE1-214ENST00000530886 LOXL3P58215 753 aa6.43□□□□□ -1.38
CSDE1-214ENST00000530886 TBC1D28Q2M2D7 210 aa6.43□□□□□ -1.38
CSDE1-214ENST00000530886 LINC00305Q7Z4B0 112 aa6.43□□□□□ -1.38
CSDE1-214ENST00000530886 PLXDC1Q8IUK5 500 aa6.43□□□□□ -1.38
CSDE1-214ENST00000530886 ZCCHC24Q8N2G6 241 aaKnown RBP6.43□□□□□ -1.38
CSDE1-214ENST00000530886 SRSF12Q8WXF0 261 aaKnown RBP6.43□□□□□ -1.38
CSDE1-214ENST00000530886 TRGV9Q99603 122 aa6.43□□□□□ -1.38
CSDE1-214ENST00000530886 Q9H3A6 140 aa6.43□□□□□ -1.38
CSDE1-214ENST00000530886 ZNF71Q9NQZ8 489 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-214ENST00000530886 IGHV3-43A0A0B4J1X8 118 aa6.43□□□□□ -1.38
CSDE1-214ENST00000530886 K7EMI3 77 aa6.43□□□□□ -1.38
CSDE1-214ENST00000530886 IGHV3-43DP0DP04 118 aa6.43□□□□□ -1.38
CSDE1-214ENST00000530886 PSMB2P49721 201 aa6.43□□□□□ -1.38
CSDE1-214ENST00000530886 C11orf53Q8IXP5 236 aa6.43□□□□□ -1.38
CSDE1-214ENST00000530886 PSMG3-AS1Q96PY0 264 aa6.43□□□□□ -1.38
CSDE1-214ENST00000530886 LMO7DNF2Z398 122 aa6.42□□□□□ -1.38
CSDE1-214ENST00000530886 PLNP26678 52 aa6.42□□□□□ -1.38
CSDE1-214ENST00000530886 RPL39P5Q59GN2 51 aa6.42□□□□□ -1.38
CSDE1-214ENST00000530886 LRRC75A-AS1Q8N1F1 130 aa6.42□□□□□ -1.38
CSDE1-214ENST00000530886 NXT2Q9NPJ8 142 aaKnown RBP6.42□□□□□ -1.38
CSDE1-214ENST00000530886 TMEM14CQ9P0S9 112 aa6.42□□□□□ -1.38
CSDE1-214ENST00000530886 ZZEF1O43149 2961 aa6.42□□□□□ -1.38
CSDE1-214ENST00000530886 ASCC3Q8N3C0 2202 aaKnown RBP6.42□□□□□ -1.38
CSDE1-214ENST00000530886 A0A1B0GX51 115 aa6.42□□□□□ -1.38
CSDE1-214ENST00000530886 NCBP2LA6PVI3 153 aaKnown RBP6.42□□□□□ -1.38
CSDE1-214ENST00000530886 DEFB108AA8MXU0 73 aa6.42□□□□□ -1.38
CSDE1-214ENST00000530886 TMEM240Q5SV17 173 aa6.42□□□□□ -1.38
CSDE1-214ENST00000530886 MYOZ3Q8TDC0 251 aa6.42□□□□□ -1.38
CSDE1-214ENST00000530886 IMMP1LQ96LU5 166 aa6.42□□□□□ -1.38
CSDE1-214ENST00000530886 SGK494Q96LW2 274 aa6.42□□□□□ -1.38
CSDE1-214ENST00000530886 MYO9BQ13459 2157 aa6.42□□□□□ -1.38
CSDE1-214ENST00000530886 CXCL13O43927 109 aa6.42□□□□□ -1.38
CSDE1-214ENST00000530886 PF4V1P10720 104 aa6.42□□□□□ -1.38
CSDE1-214ENST00000530886 RPL13AP40429 203 aaKnown RBP6.42□□□□□ -1.38
CSDE1-214ENST00000530886 RBMXL3Q8N7X1 1067 aaKnown RBP6.42□□□□□ -1.38
CSDE1-214ENST00000530886 CRLF1O75462 422 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 DEFB133Q30KQ1 61 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 COX8CQ7Z4L0 72 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 AMN1Q8IY45 258 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 OR11H6Q8NGC7 330 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 OR4C13Q8NGP0 309 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 AKIRIN1Q9H9L7 192 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-214ENST00000530886 CSMD1Q96PZ7 3565 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 SMIM9A6NGZ8 99 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 TCL1BO95988 128 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 CD7P09564 240 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 SCGB1C2P0DMR2 95 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 CCL5P13501 91 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 ZNF134P52741 427 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 MLANAQ16655 118 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 PVRIGQ6DKI7 326 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 SRSF8Q9BRL6 282 aaKnown RBP6.41□□□□□ -1.38
CSDE1-214ENST00000530886 SPRY4Q9C004 299 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 NDUFA4L2Q9NRX3 87 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 IGHV1-45A0A0A0MS14 117 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 TRAV12-1A0A0B4J245 112 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 LINC01548A6NM66 108 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 IQCF6A8MYZ5 107 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 MRPL33O75394 65 aaKnown RBP6.41□□□□□ -1.38
CSDE1-214ENST00000530886 HOXA4Q00056 320 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-214ENST00000530886 UTF1Q5T230 341 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 ZFP2Q6ZN57 461 aa6.41□□□□□ -1.38
CSDE1-214ENST00000530886 WDFY4Q6ZS81 3184 aa6.4□□□□□ -1.38
CSDE1-214ENST00000530886 LINC01549A6NIU2 74 aa6.4□□□□□ -1.38
CSDE1-214ENST00000530886 LEPP41159 167 aa6.4□□□□□ -1.38
CSDE1-214ENST00000530886 ANXA2RQ3ZCQ2 193 aa6.4□□□□□ -1.38
CSDE1-214ENST00000530886 C1orf210Q8IVY1 113 aa6.4□□□□□ -1.38
CSDE1-214ENST00000530886 ODF3Q96PU9 254 aa6.4□□□□□ -1.38
CSDE1-214ENST00000530886 FOXC2Q99958 501 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms