RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 ZNF503Q96F45 646 aa15.77■□□□□ 0.12
CAPN1-220ENST00000530567 C16orf92Q96LL3 132 aa15.77■□□□□ 0.12
CAPN1-220ENST00000530567 ZNF586Q9NXT0 402 aa15.77■□□□□ 0.12
CAPN1-220ENST00000530567 H3BTX0 84 aa15.77■□□□□ 0.11
CAPN1-220ENST00000530567 FAM122CQ6P4D5 195 aa15.77■□□□□ 0.11
CAPN1-220ENST00000530567 RPRMQ9NS64 109 aa15.77■□□□□ 0.11
CAPN1-220ENST00000530567 SLC17A3O00476 420 aa15.76■□□□□ 0.11
CAPN1-220ENST00000530567 ID1P41134 155 aa15.76■□□□□ 0.11
CAPN1-220ENST00000530567 IGFL4Q6B9Z1 124 aa15.76■□□□□ 0.11
CAPN1-220ENST00000530567 LCN15Q6UWW0 184 aa15.76■□□□□ 0.11
CAPN1-220ENST00000530567 SAT2Q96F10 170 aaPredicted RBP15.76■□□□□ 0.11
CAPN1-220ENST00000530567 B9D2Q9BPU9 175 aa15.76■□□□□ 0.11
CAPN1-220ENST00000530567 DNAH9Q9NYC9 4486 aa15.75■□□□□ 0.11
CAPN1-220ENST00000530567 AGRNO00468 2067 aa15.75■□□□□ 0.11
CAPN1-220ENST00000530567 MBP02144 154 aa15.75■□□□□ 0.11
CAPN1-220ENST00000530567 HIST1H1EP10412 219 aaKnown RBP15.75■□□□□ 0.11
CAPN1-220ENST00000530567 DEFB1P60022 68 aa15.75■□□□□ 0.11
CAPN1-220ENST00000530567 TMEM41BQ5BJD5 291 aa15.75■□□□□ 0.11
CAPN1-220ENST00000530567 STOML3Q8TAV4 291 aa15.75■□□□□ 0.11
CAPN1-220ENST00000530567 FXYD5Q96DB9 178 aa15.75■□□□□ 0.11
CAPN1-220ENST00000530567 LINC00052Q96N35 136 aa15.75■□□□□ 0.11
CAPN1-220ENST00000530567 ZNF331Q9NQX6 463 aaPredicted RBP15.75■□□□□ 0.11
CAPN1-220ENST00000530567 PLA2G2EQ9NZK7 142 aa15.75■□□□□ 0.11
CAPN1-220ENST00000530567 KNCNA6PVL3 124 aa15.74■□□□□ 0.11
CAPN1-220ENST00000530567 HLA-DMBP28068 263 aa15.74■□□□□ 0.11
CAPN1-220ENST00000530567 RNF182Q8N6D2 247 aa15.74■□□□□ 0.11
CAPN1-220ENST00000530567 PAXXQ9BUH6 204 aa15.74■□□□□ 0.11
CAPN1-220ENST00000530567 OR51M1Q9H341 326 aa15.74■□□□□ 0.11
CAPN1-220ENST00000530567 TRBV19A0A075B6N1 114 aa15.73■□□□□ 0.11
CAPN1-220ENST00000530567 A0A1W2PPV4 95 aa15.73■□□□□ 0.11
CAPN1-220ENST00000530567 NDUFB4O95168 129 aa15.73■□□□□ 0.11
CAPN1-220ENST00000530567 CDC34P49427 236 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-220ENST00000530567 NKX2-5P52952 324 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-220ENST00000530567 TAS2R45P59539 299 aa15.73■□□□□ 0.11
CAPN1-220ENST00000530567 GUK1Q16774 197 aa15.73■□□□□ 0.11
CAPN1-220ENST00000530567 KHDC3LQ587J8 217 aa15.73■□□□□ 0.11
CAPN1-220ENST00000530567 SBSPONQ8IVN8 264 aa15.73■□□□□ 0.11
CAPN1-220ENST00000530567 SLC50A1Q9BRV3 221 aa15.73■□□□□ 0.11
CAPN1-220ENST00000530567 HMGB3O15347 200 aaKnown RBP15.72■□□□□ 0.11
CAPN1-220ENST00000530567 OR7C2O60412 319 aa15.72■□□□□ 0.11
CAPN1-220ENST00000530567 ZNF253O75346 499 aa15.72■□□□□ 0.11
CAPN1-220ENST00000530567 OR10J4P0C629 311 aa15.72■□□□□ 0.11
CAPN1-220ENST00000530567 SEC11BP0C7V7 166 aa15.72■□□□□ 0.11
CAPN1-220ENST00000530567 TPT1P13693 172 aaKnown RBP15.72■□□□□ 0.11
CAPN1-220ENST00000530567 ZNF726P1Q15940 193 aa15.72■□□□□ 0.11
CAPN1-220ENST00000530567 GDF5OSQ5U4N7 250 aa15.72■□□□□ 0.11
CAPN1-220ENST00000530567 SSX7Q7RTT5 188 aa15.72■□□□□ 0.11
CAPN1-220ENST00000530567 BAP18Q8IXM2 172 aa15.72■□□□□ 0.11
CAPN1-220ENST00000530567 RAB24Q969Q5 203 aa15.72■□□□□ 0.11
CAPN1-220ENST00000530567 LOC102724200A0A096LPH7 203 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-220ENST00000530567 EIF5AP63241 154 aaKnown RBP15.71■□□□□ 0.11
CAPN1-220ENST00000530567 HAGHQ16775 308 aa15.71■□□□□ 0.11
CAPN1-220ENST00000530567 ACTL10Q5JWF8 245 aa15.71■□□□□ 0.11
CAPN1-220ENST00000530567 RNF141Q8WVD5 230 aa15.71■□□□□ 0.11
CAPN1-220ENST00000530567 ASCL2Q99929 193 aa15.71■□□□□ 0.11
CAPN1-220ENST00000530567 STAG3L2P0CL84 134 aa15.7■□□□□ 0.1
CAPN1-220ENST00000530567 STAG3L3P0CL85 134 aa15.7■□□□□ 0.1
CAPN1-220ENST00000530567 RPL35AP18077 110 aaKnown RBP15.7■□□□□ 0.1
CAPN1-220ENST00000530567 UBE2L3P68036 154 aaKnown RBP15.7■□□□□ 0.1
CAPN1-220ENST00000530567 PDE6HQ13956 83 aa15.7■□□□□ 0.1
CAPN1-220ENST00000530567 AKR1C8PQ5T2L2 129 aa15.7■□□□□ 0.1
CAPN1-220ENST00000530567 TRPT1Q86TN4 253 aaKnown RBP15.7■□□□□ 0.1
CAPN1-220ENST00000530567 LRRC20Q8TCA0 184 aa15.7■□□□□ 0.1
CAPN1-220ENST00000530567 SAV1Q9H4B6 383 aaPredicted RBP15.7■□□□□ 0.1
CAPN1-220ENST00000530567 F6UB75 175 aa15.69■□□□□ 0.1
CAPN1-220ENST00000530567 NBEAP1P0C6P0 100 aa15.69■□□□□ 0.1
CAPN1-220ENST00000530567 HLA-DRB4P13762 266 aa15.69■□□□□ 0.1
CAPN1-220ENST00000530567 PSG3Q16557 428 aa15.69■□□□□ 0.1
CAPN1-220ENST00000530567 PQLC2Q6ZP29 291 aa15.69■□□□□ 0.1
CAPN1-220ENST00000530567 FOXI2Q6ZQN5 318 aa15.69■□□□□ 0.1
CAPN1-220ENST00000530567 BLNKQ8WV28 456 aa15.69■□□□□ 0.1
CAPN1-220ENST00000530567 ACTR3CQ9C0K3 210 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-220ENST00000530567 HLA-DRB4X5D2U9 266 aa15.69■□□□□ 0.1
CAPN1-220ENST00000530567 H3BMM0 161 aa15.68■□□□□ 0.1
CAPN1-220ENST00000530567 ARL14EPLP0DKL9 152 aa15.68■□□□□ 0.1
CAPN1-220ENST00000530567 SLC51BQ86UW2 128 aa15.68■□□□□ 0.1
CAPN1-220ENST00000530567 TMED6Q8WW62 240 aa15.68■□□□□ 0.1
CAPN1-220ENST00000530567 PHYHIPLQ96FC7 376 aa15.68■□□□□ 0.1
CAPN1-220ENST00000530567 A0A0J9YX75 114 aa15.68■□□□□ 0.1
CAPN1-220ENST00000530567 STHQ8IWL8 128 aa15.68■□□□□ 0.1
CAPN1-220ENST00000530567 ZNF738Q8NE65 137 aa15.68■□□□□ 0.1
CAPN1-220ENST00000530567 CTXND1A0A1B0GTU2 59 aa15.67■□□□□ 0.1
CAPN1-220ENST00000530567 PRB4P10163 310 aaPredicted RBP15.67■□□□□ 0.1
CAPN1-220ENST00000530567 FHITP49789 147 aa15.67■□□□□ 0.1
CAPN1-220ENST00000530567 COL7A1Q02388 2944 aa15.66■□□□□ 0.1
CAPN1-220ENST00000530567 HUWE1Q7Z6Z7 4374 aaKnown RBP15.66■□□□□ 0.1
CAPN1-220ENST00000530567 KIR2DL5BA0A0G2JN68 375 aa15.66■□□□□ 0.1
CAPN1-220ENST00000530567 KIR2DL5BA0A0G2JPC4 375 aa15.66■□□□□ 0.1
CAPN1-220ENST00000530567 ZNF705FA8MVS1 300 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-220ENST00000530567 KIR2DL5AQ8N109 375 aa15.66■□□□□ 0.1
CAPN1-220ENST00000530567 EXOC3-AS1Q8N2X6 119 aa15.66■□□□□ 0.1
CAPN1-220ENST00000530567 KIR2DL5BQ8NHK3 375 aa15.66■□□□□ 0.1
CAPN1-220ENST00000530567 TM2D3Q9BRN9 247 aa15.66■□□□□ 0.1
CAPN1-220ENST00000530567 BOLA1Q9Y3E2 137 aa15.66■□□□□ 0.1
CAPN1-220ENST00000530567 A8MTW9 85 aa15.65■□□□□ 0.1
CAPN1-220ENST00000530567 UMAD1C9J7I0 102 aa15.65■□□□□ 0.1
CAPN1-220ENST00000530567 PRAC2D3DTV9 90 aa15.65■□□□□ 0.1
CAPN1-220ENST00000530567 M0R3E3 92 aa15.65■□□□□ 0.1
CAPN1-220ENST00000530567 GCHFRP30047 84 aa15.65■□□□□ 0.1
CAPN1-220ENST00000530567 APOC4P55056 127 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms