RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 TMEM236Q5W0B7 351 aa4.24□□□□□ -1.73
SVIP-204ENST00000530199 CMTM1Q8IZ96 169 aa4.24□□□□□ -1.73
SVIP-204ENST00000530199 GDPD1Q8N9F7 314 aa4.24□□□□□ -1.73
SVIP-204ENST00000530199 UBAC2Q8NBM4 344 aa4.24□□□□□ -1.73
SVIP-204ENST00000530199 OR4B1Q8NGF8 309 aa4.24□□□□□ -1.73
SVIP-204ENST00000530199 FAM210AQ96ND0 272 aa4.24□□□□□ -1.73
SVIP-204ENST00000530199 C7orf50Q9BRJ6 194 aaKnown RBP4.24□□□□□ -1.73
SVIP-204ENST00000530199 OR2D2Q9H210 308 aa4.24□□□□□ -1.73
SVIP-204ENST00000530199 LY96Q9Y6Y9 160 aa4.24□□□□□ -1.73
SVIP-204ENST00000530199 V9GYY5 206 aaPredicted RBP4.24□□□□□ -1.73
SVIP-204ENST00000530199 IGHV3-66A0A0C4DH42 116 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 A0A0J9YY99 117 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 KLLNB2CW77 178 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 PSCAO43653 123 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 INSP01308 110 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 HTR1AP08908 422 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 MGMTP16455 207 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 HLA-GP17693 338 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 ELK1P19419 428 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 FXYD7P58549 80 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 PSME3P61289 254 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 SNRPD3P62318 126 aaKnown RBP4.23□□□□□ -1.73
SVIP-204ENST00000530199 HLA-DRB3P79483 266 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 TDRG1Q3Y452 100 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 TOMM20LQ6UXN7 152 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 GID4Q8IVV7 300 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 VKORC1L1Q8N0U8 176 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 BPIFCQ8NFQ6 507 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 NRBF2Q96F24 287 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 Q96MT0 163 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 LINC00467Q9BRT7 94 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 SIKE1Q9BRV8 207 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 DPH3P1Q9H4G8 78 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 SAR1AQ9NR31 198 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 TAS2R4Q9NYW5 299 aa4.23□□□□□ -1.73
SVIP-204ENST00000530199 TRAV5A0A0B4J249 113 aa4.22□□□□□ -1.73
SVIP-204ENST00000530199 IGKV1-6A0A0C4DH72 117 aa4.22□□□□□ -1.73
SVIP-204ENST00000530199 A0A0J9YXV3 536 aa4.22□□□□□ -1.73
SVIP-204ENST00000530199 DENRO43583 198 aaKnown RBP4.22□□□□□ -1.73
SVIP-204ENST00000530199 CRISP2P16562 243 aa4.22□□□□□ -1.73
SVIP-204ENST00000530199 SERPINB10P48595 397 aa4.22□□□□□ -1.73
SVIP-204ENST00000530199 B2MP61769 119 aa4.22□□□□□ -1.73
SVIP-204ENST00000530199 DHRS2Q13268 280 aa4.22□□□□□ -1.73
SVIP-204ENST00000530199 UNC119Q13432 240 aa4.22□□□□□ -1.73
SVIP-204ENST00000530199 OR2T5Q6IEZ7 315 aa4.22□□□□□ -1.73
SVIP-204ENST00000530199 CROCCP2Q86T23 111 aa4.22□□□□□ -1.73
SVIP-204ENST00000530199 OR10J6PQ8NGY7 276 aa4.22□□□□□ -1.73
SVIP-204ENST00000530199 OR2T29Q8NH02 315 aa4.22□□□□□ -1.73
SVIP-204ENST00000530199 PPP1R14BQ96C90 147 aa4.22□□□□□ -1.73
SVIP-204ENST00000530199 FAAP24Q9BTP7 215 aa4.22□□□□□ -1.73
SVIP-204ENST00000530199 IGHV3-21A0A0B4J1V1 117 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 A0A0B4J2A0 478 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 TMEM212A6NML5 194 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 F6UB75 175 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 PEX7O00628 323 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 SERPINE2P07093 398 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 CELP19835 753 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 EVI2AP22794 236 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 NPPCP23582 126 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 CRYBB3P26998 211 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 DCKP27707 260 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 EIF2B2P49770 351 aaKnown RBP4.21□□□□□ -1.74
SVIP-204ENST00000530199 MNAT1P51948 309 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 AP2S1P53680 142 aaPredicted RBP4.21□□□□□ -1.74
SVIP-204ENST00000530199 WNT4P56705 351 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 GDF5OSQ5U4N7 250 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 THOC7Q6I9Y2 204 aaKnown RBP4.21□□□□□ -1.74
SVIP-204ENST00000530199 GLIPR1L1Q6UWM5 242 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 TMED4Q7Z7H5 227 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 SPATA24Q86W54 205 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 C10orf126Q8N4M7 172 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 OR10R2Q8NGX6 335 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 SLC25A46Q96AG3 418 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 TLCD1Q96CP7 247 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 IGF2BP2-AS1Q96M15 143 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 DCUN1D5Q9BTE7 237 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 PRRG3Q9BZD7 231 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 SAV1Q9H4B6 383 aaPredicted RBP4.21□□□□□ -1.74
SVIP-204ENST00000530199 BANF2Q9H503 90 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 BET1LQ9NYM9 111 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 SHPKQ9UHJ6 478 aa4.21□□□□□ -1.74
SVIP-204ENST00000530199 F11RQ9Y624 299 aaKnown RBP4.21□□□□□ -1.74
SVIP-204ENST00000530199 A0A0G2JND7 137 aa4.2□□□□□ -1.74
SVIP-204ENST00000530199 ZNF705GA8MUZ8 300 aaPredicted RBP4.2□□□□□ -1.74
SVIP-204ENST00000530199 ZNF861PO60384 105 aa4.2□□□□□ -1.74
SVIP-204ENST00000530199 PPP3R1P63098 170 aa4.2□□□□□ -1.74
SVIP-204ENST00000530199 PSG9Q00887 426 aa4.2□□□□□ -1.74
SVIP-204ENST00000530199 WT1-ASQ06250 92 aa4.2□□□□□ -1.74
SVIP-204ENST00000530199 COA6Q5JTJ3 125 aaKnown RBP4.2□□□□□ -1.74
SVIP-204ENST00000530199 SPATA31B1PQ5VZV4 182 aa4.2□□□□□ -1.74
SVIP-204ENST00000530199 FOXI2Q6ZQN5 318 aa4.2□□□□□ -1.74
SVIP-204ENST00000530199 ATP6V1G3Q96LB4 118 aa4.2□□□□□ -1.74
SVIP-204ENST00000530199 TMEM208Q9BTX3 173 aa4.2□□□□□ -1.74
SVIP-204ENST00000530199 GABARAPL3Q9BY60 117 aa4.2□□□□□ -1.74
SVIP-204ENST00000530199 SLC35B3Q9H1N7 401 aa4.2□□□□□ -1.74
SVIP-204ENST00000530199 BABAM2Q9NXR7 383 aa4.2□□□□□ -1.74
SVIP-204ENST00000530199 TIMM8BQ9Y5J9 83 aaPredicted RBP4.2□□□□□ -1.74
SVIP-204ENST00000530199 TEX46H3BTG2 121 aa4.19□□□□□ -1.74
SVIP-204ENST00000530199 ATP8B1O43520 1251 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms