RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 LPCAT3Q6P1A2 487 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 MORN3Q6PF18 240 aaPredicted RBP3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 TOMM20LQ6UXN7 152 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 ZNF600Q6ZNG1 722 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 Q8NAQ8 132 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 S100A16Q96FQ6 103 aaKnown RBP3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 NARS2Q96I59 477 aaKnown RBP3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 PYGO2Q9BRQ0 406 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 YTHDF1Q9BYJ9 559 aaKnown RBP3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 FXYD6Q9H0Q3 95 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 PPDPFQ9H3Y8 114 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 VSIRQ9H7M9 311 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 VCX3AQ9NNX9 186 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 NUDT15Q9NV35 164 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 RABAC1Q9UI14 185 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 APLNQ9ULZ1 77 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 RNF24Q9Y225 148 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 PKHD1P08F94 4074 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 CORTO00230 105 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 WRBO00258 174 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 IGHV3-48P01763 117 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 NPPCP23582 126 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 HLA-DMBP28068 263 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 HRH1P35367 487 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 SNCAP37840 140 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 TAS2R20P59543 309 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 HSPE1P61604 102 aaKnown RBP3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 TSPAN5P62079 268 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 TIGITQ495A1 244 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 UBE2NLQ5JXB2 153 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 TMEM69Q5SWH9 247 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 RNASEKQ6P5S7 137 aaKnown RBP3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 MTURNQ8N3F0 131 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 ZNF414Q96IQ9 312 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 SEC22AQ96IW7 307 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 METTL26Q96S19 204 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 RNF126Q9BV68 326 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 MRPS26Q9BYN8 205 aaKnown RBP3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 RNF167Q9H6Y7 350 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 ANAPC10Q9UM13 185 aa3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 PUS1Q9Y606 427 aaKnown RBP eCLIP3.6□□□□□ -1.83
AMBRA1-209ENST00000529963 DYNC1H1Q14204 4646 aaKnown RBP3.59□□□□□ -1.83
AMBRA1-209ENST00000529963 DNAH17Q9UFH2 4485 aa3.59□□□□□ -1.83
AMBRA1-209ENST00000529963 DNAH11Q96DT5 4516 aa3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 DNAH2Q9P225 4427 aa3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 IGHV3-66A0A0C4DH42 116 aa3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 CCDC160A6NGH7 325 aa3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 ZNF705EA8MWA4 302 aaPredicted RBP3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 ATG12O94817 140 aa3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 ZNF688P0C7X2 276 aa3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 RBMY1A1P0DJD3 496 aaKnown RBP3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 RBMY1CP0DJD4 496 aa3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 HLA-DMAP28067 261 aa3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 PRSS3P35030 304 aa3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 EIF2B2P49770 351 aaKnown RBP3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 SUB1P53999 127 aaKnown RBP eCLIP3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 IL18Q14116 193 aa3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 RBMY1FQ15415 496 aaKnown RBP3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 TMUB2Q71RG4 321 aa3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 FAM24BQ8N5W8 94 aa3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 SLC35G3Q8N808 338 aa3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 MRGPRFQ96AM1 343 aa3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 PDCD10Q9BUL8 212 aa3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 ENY2Q9NPA8 101 aa3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 TBC1D24Q9ULP9 559 aa3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 FAT2Q9NYQ8 4349 aa3.59□□□□□ -1.84
AMBRA1-209ENST00000529963 DEFB131BA0A096LNP1 70 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 KNCNA6PVL3 124 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 INS-IGF2F8WCM5 200 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 TMEM50AO95807 157 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 IFNA17P01571 189 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 IGKV1-39P01597 117 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 IGKV1D-39P04432 117 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 GIG44P09565 113 aaPredicted RBP3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 P0DMU3 169 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 FAM231AP0DMU4 169 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 FAM231CP0DMU5 169 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 NPY1RP25929 384 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 CRYBB3P26998 211 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 RCVRNP35243 200 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 OPRK1P41145 380 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 ALDH3B2P48448 385 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 AKR1C2P52895 323 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 NUTF2P61970 127 aaKnown RBP3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 SPINK9Q5DT21 86 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 ACTL10Q5JWF8 245 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 UQCC3Q6UW78 93 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 OR4C5Q8NGB2 326 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 TMEM230Q96A57 120 aa3.58□□□□□ -1.84
AMBRA1-209ENST00000529963 TRAV30A0A087WSZ9 112 aa3.57□□□□□ -1.84
AMBRA1-209ENST00000529963 IGHV3-16A0A0C4DH30 117 aa3.57□□□□□ -1.84
AMBRA1-209ENST00000529963 SMIM31A0A1B0GVY4 71 aa3.57□□□□□ -1.84
AMBRA1-209ENST00000529963 ATP5LO75964 103 aa3.57□□□□□ -1.84
AMBRA1-209ENST00000529963 RNASE2P10153 161 aaKnown RBP3.57□□□□□ -1.84
AMBRA1-209ENST00000529963 PGAM2P15259 253 aa3.57□□□□□ -1.84
AMBRA1-209ENST00000529963 RPL5P46777 297 aaKnown RBP3.57□□□□□ -1.84
AMBRA1-209ENST00000529963 AP2S1P53680 142 aaPredicted RBP3.57□□□□□ -1.84
AMBRA1-209ENST00000529963 LSM3P62310 102 aaKnown RBP3.57□□□□□ -1.84
AMBRA1-209ENST00000529963 SNRPD3P62318 126 aaKnown RBP3.57□□□□□ -1.84
AMBRA1-209ENST00000529963 DHRS2Q13268 280 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms