RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 TMEM147Q9BVK8 224 aa6.2□□□□□ -1.42
VPS11-203ENST00000529545 HSPB7Q9UBY9 170 aa6.2□□□□□ -1.42
VPS11-203ENST00000529545 PAIP2BQ9ULR5 123 aaKnown RBP6.2□□□□□ -1.42
VPS11-203ENST00000529545 TMEM56-RWDD3S4R434 201 aa6.2□□□□□ -1.42
VPS11-203ENST00000529545 FAT1Q14517 4588 aa6.2□□□□□ -1.42
VPS11-203ENST00000529545 CRYM-AS1A6NIL9 109 aa6.19□□□□□ -1.42
VPS11-203ENST00000529545 SNURFLB1AK76 121 aa6.19□□□□□ -1.42
VPS11-203ENST00000529545 DISC1C4P0D8 188 aa6.19□□□□□ -1.42
VPS11-203ENST00000529545 SIVA1O15304 175 aa6.19□□□□□ -1.42
VPS11-203ENST00000529545 AKR1C4P17516 323 aa6.19□□□□□ -1.42
VPS11-203ENST00000529545 CDKN1BP46527 198 aa6.19□□□□□ -1.42
VPS11-203ENST00000529545 ICAM4Q14773 271 aa6.19□□□□□ -1.42
VPS11-203ENST00000529545 NFE4Q86UQ8 179 aa6.19□□□□□ -1.42
VPS11-203ENST00000529545 THAP8Q8NA92 274 aa6.19□□□□□ -1.42
VPS11-203ENST00000529545 OR8A1Q8NGG7 326 aa6.19□□□□□ -1.42
VPS11-203ENST00000529545 OR1S1Q8NH92 325 aa6.19□□□□□ -1.42
VPS11-203ENST00000529545 LRRC20Q8TCA0 184 aa6.19□□□□□ -1.42
VPS11-203ENST00000529545 RNASE8Q8TDE3 154 aaKnown RBP6.19□□□□□ -1.42
VPS11-203ENST00000529545 C17orf77Q96MU5 243 aa6.19□□□□□ -1.42
VPS11-203ENST00000529545 MDFICQ9P1T7 246 aa6.19□□□□□ -1.42
VPS11-203ENST00000529545 TRAV8-2A0A0B4J237 113 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 A0A0B4J2A0 478 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 PIGBOS1A0A0B4J2F0 54 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 GAGE12BA1L429 117 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 PFDN1O60925 122 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 GAGE7O76087 117 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 SMR3BP02814 79 aaPredicted RBP6.18□□□□□ -1.42
VPS11-203ENST00000529545 GAGE12FP0CL80 117 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 GAGE12GP0CL81 117 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 GAGE12IP0CL82 117 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 RPL7P18124 248 aaKnown RBP6.18□□□□□ -1.42
VPS11-203ENST00000529545 HOXA5P20719 270 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 FUSP35637 526 aaKnown RBP eCLIP6.18□□□□□ -1.42
VPS11-203ENST00000529545 TMBIM6P55061 237 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 RAP2BP61225 183 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 RPP30P78346 268 aaKnown RBP6.18□□□□□ -1.42
VPS11-203ENST00000529545 LCE4AQ5TA78 99 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 Q6ZRN7 208 aaPredicted RBP6.18□□□□□ -1.42
VPS11-203ENST00000529545 Q6ZSN1 163 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 S100A7AQ86SG5 101 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 AP3S1Q92572 193 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 YIPF6Q96EC8 236 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 C20orf144Q9BQM9 153 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 EXTL2Q9UBQ6 330 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 SHPKQ9UHJ6 478 aa6.18□□□□□ -1.42
VPS11-203ENST00000529545 IGKV1OR2-108A0A075B7D4 117 aa6.17□□□□□ -1.42
VPS11-203ENST00000529545 TRAV9-2A0A087WT02 112 aa6.17□□□□□ -1.42
VPS11-203ENST00000529545 H3BMQ9 156 aa6.17□□□□□ -1.42
VPS11-203ENST00000529545 KRTAP10-1P60331 282 aa6.17□□□□□ -1.42
VPS11-203ENST00000529545 SRPXP78539 464 aa6.17□□□□□ -1.42
VPS11-203ENST00000529545 SRSF3P84103 164 aaKnown RBP6.17□□□□□ -1.42
VPS11-203ENST00000529545 SSBP1Q04837 148 aaKnown RBP6.17□□□□□ -1.42
VPS11-203ENST00000529545 PSG3Q16557 428 aa6.17□□□□□ -1.42
VPS11-203ENST00000529545 LINC00612Q8N6U2 182 aa6.17□□□□□ -1.42
VPS11-203ENST00000529545 SCGB3A2Q96PL1 93 aa6.17□□□□□ -1.42
VPS11-203ENST00000529545 PRRT1Q99946 306 aa6.17□□□□□ -1.42
VPS11-203ENST00000529545 GPR132Q9UNW8 380 aa6.17□□□□□ -1.42
VPS11-203ENST00000529545 SRRM2Q9UQ35 2752 aaKnown RBP6.17□□□□□ -1.42
VPS11-203ENST00000529545 FLG2Q5D862 2391 aaPredicted RBP6.16□□□□□ -1.42
VPS11-203ENST00000529545 A0A087WTM6 91 aa6.16□□□□□ -1.42
VPS11-203ENST00000529545 A0A096LPF7 62 aa6.16□□□□□ -1.42
VPS11-203ENST00000529545 MED6O75586 246 aa6.16□□□□□ -1.42
VPS11-203ENST00000529545 AKAIN1P0CW23 69 aa6.16□□□□□ -1.42
VPS11-203ENST00000529545 IAPPP10997 89 aa6.16□□□□□ -1.42
VPS11-203ENST00000529545 ANXA3P12429 323 aa6.16□□□□□ -1.42
VPS11-203ENST00000529545 CXCL3P19876 107 aa6.16□□□□□ -1.42
VPS11-203ENST00000529545 GCSHP23434 173 aa6.16□□□□□ -1.42
VPS11-203ENST00000529545 GATA2P23769 480 aaPredicted RBP6.16□□□□□ -1.42
VPS11-203ENST00000529545 BCAP31P51572 246 aa6.16□□□□□ -1.42
VPS11-203ENST00000529545 NCS1P62166 190 aa6.16□□□□□ -1.42
VPS11-203ENST00000529545 AKR1C1Q04828 323 aa6.16□□□□□ -1.42
VPS11-203ENST00000529545 ANKRD39Q53RE8 183 aa6.16□□□□□ -1.42
VPS11-203ENST00000529545 FAAP20Q6NZ36 180 aa6.16□□□□□ -1.42
VPS11-203ENST00000529545 LYZL2Q7Z4W2 148 aa6.16□□□□□ -1.42
VPS11-203ENST00000529545 CLVS1Q8IUQ0 354 aaPredicted RBP6.16□□□□□ -1.42
VPS11-203ENST00000529545 RPUSD4Q96CM3 377 aaKnown RBP6.16□□□□□ -1.42
VPS11-203ENST00000529545 CIB3Q96Q77 187 aaPredicted RBP6.16□□□□□ -1.42
VPS11-203ENST00000529545 RNF24Q9Y225 148 aa6.16□□□□□ -1.42
VPS11-203ENST00000529545 HIGD1AQ9Y241 93 aa6.16□□□□□ -1.42
VPS11-203ENST00000529545 TRGV2A0A075B6R0 118 aa6.15□□□□□ -1.42
VPS11-203ENST00000529545 H3BRN7 92 aa6.15□□□□□ -1.42
VPS11-203ENST00000529545 ATP6V1G1O75348 118 aa6.15□□□□□ -1.42
VPS11-203ENST00000529545 HYPMO75409 117 aa6.15□□□□□ -1.42
VPS11-203ENST00000529545 NXPH4O95158 308 aa6.15□□□□□ -1.42
VPS11-203ENST00000529545 IL5P05113 134 aa6.15□□□□□ -1.42
VPS11-203ENST00000529545 OR5G3P0C626 314 aa6.15□□□□□ -1.42
VPS11-203ENST00000529545 VAMP1P23763 118 aa6.15□□□□□ -1.42
VPS11-203ENST00000529545 VBP1P61758 197 aa6.15□□□□□ -1.42
VPS11-203ENST00000529545 MRPS10P82664 201 aaKnown RBP6.15□□□□□ -1.42
VPS11-203ENST00000529545 TMED4Q7Z7H5 227 aa6.15□□□□□ -1.42
VPS11-203ENST00000529545 CCDC190Q86UF4 302 aa6.15□□□□□ -1.42
VPS11-203ENST00000529545 BCL7BQ9BQE9 202 aa6.15□□□□□ -1.42
VPS11-203ENST00000529545 SHANK2-AS3Q9BTD1 123 aa6.15□□□□□ -1.42
VPS11-203ENST00000529545 TMPRSS5Q9H3S3 457 aa6.15□□□□□ -1.42
VPS11-203ENST00000529545 MYCBP2O75592 4640 aa6.14□□□□□ -1.43
VPS11-203ENST00000529545 A0A087X0K7 114 aa6.14□□□□□ -1.43
VPS11-203ENST00000529545 CCDC160A6NGH7 325 aa6.14□□□□□ -1.43
VPS11-203ENST00000529545 DNAH10OSP0CZ25 163 aa6.14□□□□□ -1.43
VPS11-203ENST00000529545 ANXA7P20073 488 aaKnown RBP6.14□□□□□ -1.43
VPS11-203ENST00000529545 TMEM182Q6ZP80 229 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms